RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 G3V3Y1 287 aa12.94□□□□□ -0.34
CDH3-201ENST00000264012 SC5DO75845 299 aa12.94□□□□□ -0.34
CDH3-201ENST00000264012 SLC22A5O76082 557 aa12.94□□□□□ -0.34
CDH3-201ENST00000264012 DCNP07585 359 aaKnown RBP12.94□□□□□ -0.34
CDH3-201ENST00000264012 AKAIN1P0CW23 69 aa12.94□□□□□ -0.34
CDH3-201ENST00000264012 SRFP11831 508 aa12.94□□□□□ -0.34
CDH3-201ENST00000264012 BSGP35613 385 aa12.94□□□□□ -0.34
CDH3-201ENST00000264012 HYAL4Q2M3T9 481 aa12.94□□□□□ -0.34
CDH3-201ENST00000264012 FAM69AQ5T7M9 428 aa12.94□□□□□ -0.34
CDH3-201ENST00000264012 SYT6Q5T7P8 510 aaPredicted RBP12.94□□□□□ -0.34
CDH3-201ENST00000264012 OR52I1Q8NGK6 324 aa12.94□□□□□ -0.34
CDH3-201ENST00000264012 APMAPQ9HDC9 416 aa12.94□□□□□ -0.34
CDH3-201ENST00000264012 TXNL4BQ9NX01 149 aaKnown RBP12.94□□□□□ -0.34
CDH3-201ENST00000264012 OR51B4Q9Y5P0 310 aa12.94□□□□□ -0.34
CDH3-201ENST00000264012 HMX3A6NHT5 357 aa12.93□□□□□ -0.34
CDH3-201ENST00000264012 OLFM2O95897 454 aa12.93□□□□□ -0.34
CDH3-201ENST00000264012 HTR2BP41595 481 aa12.93□□□□□ -0.34
CDH3-201ENST00000264012 NR4A2P43354 598 aa12.93□□□□□ -0.34
CDH3-201ENST00000264012 METAP1P53582 386 aa12.93□□□□□ -0.34
CDH3-201ENST00000264012 ELAVL1Q15717 326 aaKnown RBP12.93□□□□□ -0.34
CDH3-201ENST00000264012 AGAP6Q5VW22 663 aa12.93□□□□□ -0.34
CDH3-201ENST00000264012 FCRLAQ7L513 359 aa12.93□□□□□ -0.34
CDH3-201ENST00000264012 NDUFAF7Q7L592 441 aa12.93□□□□□ -0.34
CDH3-201ENST00000264012 MARCH3Q86UD3 253 aa12.93□□□□□ -0.34
CDH3-201ENST00000264012 ZNF683Q8IZ20 524 aa12.93□□□□□ -0.34
CDH3-201ENST00000264012 OR2A1Q8NGT9 310 aa12.93□□□□□ -0.34
CDH3-201ENST00000264012 SCGB1C1Q8TD33 95 aa12.93□□□□□ -0.34
CDH3-201ENST00000264012 AGAP4Q96P64 663 aa12.93□□□□□ -0.34
CDH3-201ENST00000264012 ST6GALNAC5Q9BVH7 336 aa12.93□□□□□ -0.34
CDH3-201ENST00000264012 TEX101Q9BY14 249 aa12.93□□□□□ -0.34
CDH3-201ENST00000264012 CORINQ9Y5Q5 1042 aa12.93□□□□□ -0.34
CDH3-201ENST00000264012 SLC33A1O00400 549 aaPredicted RBP12.93□□□□□ -0.34
CDH3-201ENST00000264012 IGHEP01854 428 aa12.93□□□□□ -0.34
CDH3-201ENST00000264012 SMIM18P0DKX4 95 aa12.93□□□□□ -0.34
CDH3-201ENST00000264012 KCNAB1Q14722 419 aa12.93□□□□□ -0.34
CDH3-201ENST00000264012 OR7G2Q8NG99 324 aa12.93□□□□□ -0.34
CDH3-201ENST00000264012 SNIP1Q8TAD8 396 aaKnown RBP12.93□□□□□ -0.34
CDH3-201ENST00000264012 PHB2Q99623 299 aa12.93□□□□□ -0.34
CDH3-201ENST00000264012 A0A0G2JMP0 313 aa12.93□□□□□ -0.34
CDH3-201ENST00000264012 GOSR2O14653 212 aa12.93□□□□□ -0.34
CDH3-201ENST00000264012 PRAF2O60831 178 aa12.93□□□□□ -0.34
CDH3-201ENST00000264012 ALOX12BO75342 701 aa12.93□□□□□ -0.34
CDH3-201ENST00000264012 CSO75390 466 aaKnown RBP12.93□□□□□ -0.34
CDH3-201ENST00000264012 SEC14L2O76054 403 aa12.93□□□□□ -0.34
CDH3-201ENST00000264012 DPP4P27487 766 aa12.93□□□□□ -0.34
CDH3-201ENST00000264012 SNRPGP62308 76 aaKnown RBP12.93□□□□□ -0.34
CDH3-201ENST00000264012 LTBQ06643 244 aa12.93□□□□□ -0.34
CDH3-201ENST00000264012 SMAD4Q13485 552 aaKnown RBP12.93□□□□□ -0.34
CDH3-201ENST00000264012 CAMK2DQ13557 499 aa12.93□□□□□ -0.34
CDH3-201ENST00000264012 NKAIN1Q4KMZ8 207 aa12.93□□□□□ -0.34
CDH3-201ENST00000264012 OR4M2Q8NGB6 313 aa12.93□□□□□ -0.34
CDH3-201ENST00000264012 KCTD12Q96CX2 325 aaKnown RBP12.93□□□□□ -0.34
CDH3-201ENST00000264012 REV1Q9UBZ9 1251 aa12.93□□□□□ -0.34
CDH3-201ENST00000264012 PADI1Q9ULC6 663 aa12.93□□□□□ -0.34
CDH3-201ENST00000264012 TTLL8A6PVC2 850 aa12.93□□□□□ -0.34
CDH3-201ENST00000264012 GABARAPO95166 117 aa12.93□□□□□ -0.34
CDH3-201ENST00000264012 AKR1C2P52895 323 aa12.93□□□□□ -0.34
CDH3-201ENST00000264012 FXYD4P59646 89 aa12.93□□□□□ -0.34
CDH3-201ENST00000264012 ZNF511Q8NB15 262 aa12.93□□□□□ -0.34
CDH3-201ENST00000264012 DUS3LQ96G46 650 aaKnown RBP12.93□□□□□ -0.34
CDH3-201ENST00000264012 C7orf50Q9BRJ6 194 aaKnown RBP12.93□□□□□ -0.34
CDH3-201ENST00000264012 CHST8Q9H2A9 424 aa12.93□□□□□ -0.34
CDH3-201ENST00000264012 ATP13A2Q9NQ11 1180 aa12.93□□□□□ -0.34
CDH3-201ENST00000264012 MAN2C1Q9NTJ4 1040 aa12.93□□□□□ -0.34
CDH3-201ENST00000264012 A0A087WUU8 490 aa12.92□□□□□ -0.34
CDH3-201ENST00000264012 RAB40ALP0C0E4 278 aa12.92□□□□□ -0.34
CDH3-201ENST00000264012 CLDN17P56750 224 aa12.92□□□□□ -0.34
CDH3-201ENST00000264012 PCBD1P61457 104 aa12.92□□□□□ -0.34
CDH3-201ENST00000264012 RAB40AQ8WXH6 277 aa12.92□□□□□ -0.34
CDH3-201ENST00000264012 OR51J1Q9H342 316 aa12.92□□□□□ -0.34
CDH3-201ENST00000264012 C1orf198Q9H425 327 aa12.92□□□□□ -0.34
CDH3-201ENST00000264012 PLAC1Q9HBJ0 212 aa12.92□□□□□ -0.34
CDH3-201ENST00000264012 MEIOCA2RUB1 952 aa12.92□□□□□ -0.34
CDH3-201ENST00000264012 MRPL33O75394 65 aaKnown RBP12.92□□□□□ -0.34
CDH3-201ENST00000264012 TFP02787 698 aa12.92□□□□□ -0.34
CDH3-201ENST00000264012 TP53P04637 393 aaPredicted RBP12.92□□□□□ -0.34
CDH3-201ENST00000264012 IRF2P14316 349 aa12.92□□□□□ -0.34
CDH3-201ENST00000264012 GIFP27352 417 aa12.92□□□□□ -0.34
CDH3-201ENST00000264012 LIPAP38571 399 aa12.92□□□□□ -0.34
CDH3-201ENST00000264012 PPA1Q15181 289 aa12.92□□□□□ -0.34
CDH3-201ENST00000264012 SF3B4Q15427 424 aaKnown RBP eCLIP12.92□□□□□ -0.34
CDH3-201ENST00000264012 AGAP7PQ5VUJ5 663 aa12.92□□□□□ -0.34
CDH3-201ENST00000264012 DHRS4L2Q6PKH6 230 aa12.92□□□□□ -0.34
CDH3-201ENST00000264012 HCAR1Q9BXC0 346 aa12.92□□□□□ -0.34
CDH3-201ENST00000264012 FOXQ1Q9C009 403 aa12.92□□□□□ -0.34
CDH3-201ENST00000264012 CLEC2DQ9UHP7 191 aa12.92□□□□□ -0.34
CDH3-201ENST00000264012 IGHV3-20A0A0C4DH32 117 aa12.92□□□□□ -0.34
CDH3-201ENST00000264012 A0A1W2PPC4 97 aa12.92□□□□□ -0.34
CDH3-201ENST00000264012 TMEM212A6NML5 194 aa12.92□□□□□ -0.34
CDH3-201ENST00000264012 CD46P15529 392 aa12.92□□□□□ -0.34
CDH3-201ENST00000264012 CNN3Q15417 329 aaKnown RBP12.92□□□□□ -0.34
CDH3-201ENST00000264012 STK11Q15831 433 aa12.92□□□□□ -0.34
CDH3-201ENST00000264012 ARHGAP11BQ3KRB8 267 aa12.92□□□□□ -0.34
CDH3-201ENST00000264012 FAM57BQ71RH2 274 aa12.92□□□□□ -0.34
CDH3-201ENST00000264012 FBXL6Q8N531 539 aa12.92□□□□□ -0.34
CDH3-201ENST00000264012 ASB12Q8WXK4 309 aa12.92□□□□□ -0.34
CDH3-201ENST00000264012 ELF4Q99607 663 aaPredicted RBP12.92□□□□□ -0.34
CDH3-201ENST00000264012 WDR76Q9H967 626 aa12.92□□□□□ -0.34
CDH3-201ENST00000264012 ANKRD30BLA7E2S9 258 aa12.92□□□□□ -0.34
CDH3-201ENST00000264012 A8MVM7 634 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms