RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 EFR3AQ14156 821 aa12.39□□□□□ -0.43
VMP1-201ENST00000262291 STK11Q15831 433 aa12.39□□□□□ -0.43
VMP1-201ENST00000262291 NKAIN1Q4KMZ8 207 aa12.39□□□□□ -0.43
VMP1-201ENST00000262291 LINC00114Q6XXX2 140 aa12.39□□□□□ -0.43
VMP1-201ENST00000262291 MEPCEQ7L2J0 689 aaKnown RBP12.39□□□□□ -0.43
VMP1-201ENST00000262291 WDR5BQ86VZ2 330 aa12.39□□□□□ -0.43
VMP1-201ENST00000262291 IFI44Q8TCB0 444 aa12.39□□□□□ -0.43
VMP1-201ENST00000262291 ZNRF4Q8WWF5 429 aa12.39□□□□□ -0.43
VMP1-201ENST00000262291 DEDD2Q8WXF8 326 aa12.39□□□□□ -0.43
VMP1-201ENST00000262291 KISS1RQ969F8 398 aaPredicted RBP12.39□□□□□ -0.43
VMP1-201ENST00000262291 DUSP23Q9BVJ7 150 aa12.39□□□□□ -0.43
VMP1-201ENST00000262291 MRPS18AQ9NVS2 196 aaKnown RBP12.39□□□□□ -0.43
VMP1-201ENST00000262291 SEMA5BQ9P283 1151 aa12.39□□□□□ -0.43
VMP1-201ENST00000262291 COPS7AQ9UBW8 275 aa12.39□□□□□ -0.43
VMP1-201ENST00000262291 FRG2CA6NGY1 282 aa12.39□□□□□ -0.43
VMP1-201ENST00000262291 EFCAB7A8K855 629 aa12.39□□□□□ -0.43
VMP1-201ENST00000262291 LEUTXA8MZ59 168 aa12.39□□□□□ -0.43
VMP1-201ENST00000262291 IDSB3KWA1 339 aa12.39□□□□□ -0.43
VMP1-201ENST00000262291 ZNF264O43296 627 aa12.39□□□□□ -0.43
VMP1-201ENST00000262291 TRIM61Q5EBN2 209 aa12.39□□□□□ -0.43
VMP1-201ENST00000262291 FNDC7Q5VTL7 733 aa12.39□□□□□ -0.43
VMP1-201ENST00000262291 C1QL3Q5VWW1 255 aa12.39□□□□□ -0.43
VMP1-201ENST00000262291 FAM199XQ6PEV8 388 aaPredicted RBP12.39□□□□□ -0.43
VMP1-201ENST00000262291 LRRC20Q8TCA0 184 aa12.39□□□□□ -0.43
VMP1-201ENST00000262291 DAZLQ92904 295 aaKnown RBP12.39□□□□□ -0.43
VMP1-201ENST00000262291 ZNF649Q9BS31 505 aa12.39□□□□□ -0.43
VMP1-201ENST00000262291 CMC2Q9NRP2 79 aa12.39□□□□□ -0.43
VMP1-201ENST00000262291 TXNL4BQ9NX01 149 aaKnown RBP12.39□□□□□ -0.43
VMP1-201ENST00000262291 SSR3Q9UNL2 185 aa12.39□□□□□ -0.43
VMP1-201ENST00000262291 EXOSC1Q9Y3B2 195 aaKnown RBP12.39□□□□□ -0.43
VMP1-201ENST00000262291 SIRT4Q9Y6E7 314 aaPredicted RBP12.39□□□□□ -0.43
VMP1-201ENST00000262291 KIF26BQ2KJY2 2108 aa12.39□□□□□ -0.43
VMP1-201ENST00000262291 HMX3A6NHT5 357 aa12.39□□□□□ -0.43
VMP1-201ENST00000262291 ATP6V1G2-DDX39BF2Z307 99 aa12.39□□□□□ -0.43
VMP1-201ENST00000262291 CDC40O60508 579 aaKnown RBP eCLIP12.39□□□□□ -0.43
VMP1-201ENST00000262291 HEXBP07686 556 aa12.39□□□□□ -0.43
VMP1-201ENST00000262291 CPEP16870 476 aa12.39□□□□□ -0.43
VMP1-201ENST00000262291 ABCD3P28288 659 aa12.39□□□□□ -0.43
VMP1-201ENST00000262291 AQP2P41181 271 aa12.39□□□□□ -0.43
VMP1-201ENST00000262291 NAA10P41227 235 aaPredicted RBP12.39□□□□□ -0.43
VMP1-201ENST00000262291 FABP5Q01469 135 aa12.39□□□□□ -0.43
VMP1-201ENST00000262291 BTBD16Q32M84 506 aa12.39□□□□□ -0.43
VMP1-201ENST00000262291 TIMM50Q3ZCQ8 353 aa12.39□□□□□ -0.43
VMP1-201ENST00000262291 RTL4Q6ZR62 310 aa12.39□□□□□ -0.43
VMP1-201ENST00000262291 C1orf210Q8IVY1 113 aa12.39□□□□□ -0.43
VMP1-201ENST00000262291 ZNF527Q8NB42 609 aa12.39□□□□□ -0.43
VMP1-201ENST00000262291 OR1N1Q8NGS0 311 aa12.39□□□□□ -0.43
VMP1-201ENST00000262291 PCNPQ8WW12 178 aaKnown RBP12.39□□□□□ -0.43
VMP1-201ENST00000262291 TEAD3Q99594 435 aa12.39□□□□□ -0.43
VMP1-201ENST00000262291 TIGARQ9NQ88 270 aa12.39□□□□□ -0.43
VMP1-201ENST00000262291 SEC14L4Q9UDX3 406 aa12.39□□□□□ -0.43
VMP1-201ENST00000262291 SLC35A3Q9Y2D2 325 aa12.39□□□□□ -0.43
VMP1-201ENST00000262291 CCDC182A6NF36 153 aa12.38□□□□□ -0.43
VMP1-201ENST00000262291 CD8B2A6NJW9 211 aa12.38□□□□□ -0.43
VMP1-201ENST00000262291 TSPAN4O14817 238 aa12.38□□□□□ -0.43
VMP1-201ENST00000262291 F13BP05160 661 aa12.38□□□□□ -0.43
VMP1-201ENST00000262291 CD8BP10966 210 aa12.38□□□□□ -0.43
VMP1-201ENST00000262291 TACR3P29371 465 aa12.38□□□□□ -0.43
VMP1-201ENST00000262291 GALNSP34059 522 aa12.38□□□□□ -0.43
VMP1-201ENST00000262291 RGS19P49795 217 aa12.38□□□□□ -0.43
VMP1-201ENST00000262291 BAK1Q16611 211 aa12.38□□□□□ -0.43
VMP1-201ENST00000262291 OTPQ5XKR4 325 aa12.38□□□□□ -0.43
VMP1-201ENST00000262291 SLC29A4Q7RTT9 530 aa12.38□□□□□ -0.43
VMP1-201ENST00000262291 UFD1Q92890 307 aa12.38□□□□□ -0.43
VMP1-201ENST00000262291 KTI12Q96EK9 354 aaPredicted RBP12.38□□□□□ -0.43
VMP1-201ENST00000262291 NMNAT3Q96T66 252 aa12.38□□□□□ -0.43
VMP1-201ENST00000262291 ARHGAP9Q9BRR9 750 aa12.38□□□□□ -0.43
VMP1-201ENST00000262291 MED17Q9NVC6 651 aa12.38□□□□□ -0.43
VMP1-201ENST00000262291 RARRES3Q9UL19 164 aa12.38□□□□□ -0.43
VMP1-201ENST00000262291 TEX51A0A1B0GUA7 166 aa12.38□□□□□ -0.43
VMP1-201ENST00000262291 TMEM129A0AVI4 362 aa12.38□□□□□ -0.43
VMP1-201ENST00000262291 E9PI62 339 aa12.38□□□□□ -0.43
VMP1-201ENST00000262291 NCR1O76036 304 aa12.38□□□□□ -0.43
VMP1-201ENST00000262291 OR7A10O76100 309 aa12.38□□□□□ -0.43
VMP1-201ENST00000262291 GRPRP30550 384 aa12.38□□□□□ -0.43
VMP1-201ENST00000262291 SLC6A6P31641 620 aa12.38□□□□□ -0.43
VMP1-201ENST00000262291 SDC2P34741 201 aa12.38□□□□□ -0.43
VMP1-201ENST00000262291 RBM34P42696 430 aaKnown RBP12.38□□□□□ -0.43
VMP1-201ENST00000262291 GPR143P51810 404 aa12.38□□□□□ -0.43
VMP1-201ENST00000262291 ESCO2Q56NI9 601 aa12.38□□□□□ -0.43
VMP1-201ENST00000262291 RHBDD2Q6NTF9 364 aa12.38□□□□□ -0.43
VMP1-201ENST00000262291 RPTNQ6XPR3 784 aa12.38□□□□□ -0.43
VMP1-201ENST00000262291 SSX6Q7RTT6 188 aa12.38□□□□□ -0.43
VMP1-201ENST00000262291 KMT5CQ86Y97 462 aa12.38□□□□□ -0.43
VMP1-201ENST00000262291 KLHL36Q8N4N3 616 aa12.38□□□□□ -0.43
VMP1-201ENST00000262291 OR14A16Q8NHC5 309 aa12.38□□□□□ -0.43
VMP1-201ENST00000262291 ALG8Q9BVK2 526 aa12.38□□□□□ -0.43
VMP1-201ENST00000262291 TBL1XR1Q9BZK7 514 aa12.38□□□□□ -0.43
VMP1-201ENST00000262291 PRMT8Q9NR22 394 aaPredicted RBP12.38□□□□□ -0.43
VMP1-201ENST00000262291 EXOGQ9Y2C4 368 aaKnown RBP12.38□□□□□ -0.43
VMP1-201ENST00000262291 A0A0B4J293 547 aa12.37□□□□□ -0.43
VMP1-201ENST00000262291 DAPL1A0PJW8 107 aa12.37□□□□□ -0.43
VMP1-201ENST00000262291 H7C1C5 153 aa12.37□□□□□ -0.43
VMP1-201ENST00000262291 TRIM77I1YAP6 450 aa12.37□□□□□ -0.43
VMP1-201ENST00000262291 ICAM2P13598 275 aa12.37□□□□□ -0.43
VMP1-201ENST00000262291 ZNF3P17036 446 aa12.37□□□□□ -0.43
VMP1-201ENST00000262291 HK1P19367 917 aa12.37□□□□□ -0.43
VMP1-201ENST00000262291 RPS5P46782 204 aaKnown RBP12.37□□□□□ -0.43
VMP1-201ENST00000262291 LCN6P62502 163 aa12.37□□□□□ -0.43
VMP1-201ENST00000262291 LTBQ06643 244 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms