RNA–Protein interactions for RNA: ENST00000261415.11

COL4A3BP-201, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 1 (best) BASIC

Gene COL4A3BP, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-201ENST00000261415 KCNK5O95279 499 aa17.35■□□□□ 0.37
COL4A3BP-201ENST00000261415 LPLP06858 475 aa17.35■□□□□ 0.37
COL4A3BP-201ENST00000261415 ETFAP13804 333 aa17.35■□□□□ 0.37
COL4A3BP-201ENST00000261415 NT5EP21589 574 aa17.35■□□□□ 0.37
COL4A3BP-201ENST00000261415 SOX18P35713 384 aa17.35■□□□□ 0.37
COL4A3BP-201ENST00000261415 RPS26P62854 115 aaKnown RBP17.35■□□□□ 0.37
COL4A3BP-201ENST00000261415 DCDP81605 110 aaKnown RBP17.35■□□□□ 0.37
COL4A3BP-201ENST00000261415 PRR5P85299 388 aa17.35■□□□□ 0.37
COL4A3BP-201ENST00000261415 NHLH1Q02575 133 aa17.35■□□□□ 0.37
COL4A3BP-201ENST00000261415 MINDY4Q4G0A6 757 aa17.35■□□□□ 0.37
COL4A3BP-201ENST00000261415 C22orf42Q6IC83 251 aa17.35■□□□□ 0.37
COL4A3BP-201ENST00000261415 C5orf46Q6UWT4 87 aa17.35■□□□□ 0.37
COL4A3BP-201ENST00000261415 CEACAM20Q6UY09 585 aa17.35■□□□□ 0.37
COL4A3BP-201ENST00000261415 QSOX2Q6ZRP7 698 aa17.35■□□□□ 0.37
COL4A3BP-201ENST00000261415 FGD2Q7Z6J4 655 aa17.35■□□□□ 0.37
COL4A3BP-201ENST00000261415 JAZF1Q86VZ6 243 aa17.35■□□□□ 0.37
COL4A3BP-201ENST00000261415 OR7G2Q8NG99 324 aa17.35■□□□□ 0.37
COL4A3BP-201ENST00000261415 OR10G2Q8NGC3 310 aa17.35■□□□□ 0.37
COL4A3BP-201ENST00000261415 HDHD2Q9H0R4 259 aa17.35■□□□□ 0.37
COL4A3BP-201ENST00000261415 EQTNQ9NQ60 294 aa17.35■□□□□ 0.37
COL4A3BP-201ENST00000261415 GSN-AS1Q9NRJ2 163 aa17.35■□□□□ 0.37
COL4A3BP-201ENST00000261415 PADI2Q9Y2J8 665 aa17.35■□□□□ 0.37
COL4A3BP-201ENST00000261415 GSTK1Q9Y2Q3 226 aa17.35■□□□□ 0.37
COL4A3BP-201ENST00000261415 TNFRSF11BO00300 401 aa17.34■□□□□ 0.37
COL4A3BP-201ENST00000261415 EMC8O43402 210 aa17.34■□□□□ 0.37
COL4A3BP-201ENST00000261415 SGCEO43556 437 aa17.34■□□□□ 0.37
COL4A3BP-201ENST00000261415 OR10H2O60403 315 aa17.34■□□□□ 0.37
COL4A3BP-201ENST00000261415 SLC34A2O95436 690 aa17.34■□□□□ 0.37
COL4A3BP-201ENST00000261415 HRGP04196 525 aa17.34■□□□□ 0.37
COL4A3BP-201ENST00000261415 NUDT7P0C024 238 aa17.34■□□□□ 0.37
COL4A3BP-201ENST00000261415 FTH1P19P0C7X4 201 aa17.34■□□□□ 0.37
COL4A3BP-201ENST00000261415 RHCEP18577 417 aa17.34■□□□□ 0.37
COL4A3BP-201ENST00000261415 CALCRP30988 508 aa17.34■□□□□ 0.37
COL4A3BP-201ENST00000261415 RPS7P62081 194 aaKnown RBP17.34■□□□□ 0.37
COL4A3BP-201ENST00000261415 MADCAM1Q13477 382 aa17.34■□□□□ 0.37
COL4A3BP-201ENST00000261415 DOC2BQ14184 412 aa17.34■□□□□ 0.37
COL4A3BP-201ENST00000261415 PRICKLE4Q2TBC4 344 aa17.34■□□□□ 0.37
COL4A3BP-201ENST00000261415 HES5Q5TA89 166 aa17.34■□□□□ 0.37
COL4A3BP-201ENST00000261415 PTCHD4Q6ZW05 846 aa17.34■□□□□ 0.37
COL4A3BP-201ENST00000261415 NLRC3Q7RTR2 1065 aa17.34■□□□□ 0.37
COL4A3BP-201ENST00000261415 ZER1Q7Z7L7 766 aa17.34■□□□□ 0.37
COL4A3BP-201ENST00000261415 PTOV1Q86YD1 416 aa17.34■□□□□ 0.37
COL4A3BP-201ENST00000261415 NANOGP1Q8N7R0 232 aa17.34■□□□□ 0.37
COL4A3BP-201ENST00000261415 OR56A1Q8NGH5 318 aa17.34■□□□□ 0.37
COL4A3BP-201ENST00000261415 PTCHD1Q96NR3 888 aa17.34■□□□□ 0.37
COL4A3BP-201ENST00000261415 DPAGT1Q9H3H5 408 aa17.34■□□□□ 0.37
COL4A3BP-201ENST00000261415 MALT1Q9UDY8 824 aa17.34■□□□□ 0.37
COL4A3BP-201ENST00000261415 SPATA2Q9UM82 520 aa17.34■□□□□ 0.37
COL4A3BP-201ENST00000261415 SLC6A5Q9Y345 797 aa17.34■□□□□ 0.37
COL4A3BP-201ENST00000261415 NPTNQ9Y639 398 aa17.34■□□□□ 0.37
COL4A3BP-201ENST00000261415 IGLV3-12A0A075B6K2 115 aa17.33■□□□□ 0.37
COL4A3BP-201ENST00000261415 PMS2P1A4D2B8 440 aa17.33■□□□□ 0.37
COL4A3BP-201ENST00000261415 EIF1BO60739 113 aaKnown RBP17.33■□□□□ 0.37
COL4A3BP-201ENST00000261415 SLC19A2O60779 497 aa17.33■□□□□ 0.37
COL4A3BP-201ENST00000261415 ONECUT2O95948 504 aa17.33■□□□□ 0.37
COL4A3BP-201ENST00000261415 EIF1P41567 113 aaKnown RBP17.33■□□□□ 0.37
COL4A3BP-201ENST00000261415 PRKAG1P54619 331 aa17.33■□□□□ 0.37
COL4A3BP-201ENST00000261415 RAG2P55895 527 aa17.33■□□□□ 0.37
COL4A3BP-201ENST00000261415 VMACQ2NL98 169 aa17.33■□□□□ 0.37
COL4A3BP-201ENST00000261415 FAM111BQ6SJ93 734 aa17.33■□□□□ 0.37
COL4A3BP-201ENST00000261415 DGAT2L6Q6ZPD8 337 aa17.33■□□□□ 0.37
COL4A3BP-201ENST00000261415 SHFQ7M4L6 423 aa17.33■□□□□ 0.37
COL4A3BP-201ENST00000261415 SLC5A8Q8N695 610 aa17.33■□□□□ 0.37
COL4A3BP-201ENST00000261415 SCARB1Q8WTV0 552 aa17.33■□□□□ 0.37
COL4A3BP-201ENST00000261415 SLC35G5Q96KT7 338 aa17.33■□□□□ 0.37
COL4A3BP-201ENST00000261415 ULBP3Q9BZM4 244 aa17.33■□□□□ 0.37
COL4A3BP-201ENST00000261415 TGIF2Q9GZN2 237 aa17.33■□□□□ 0.37
COL4A3BP-201ENST00000261415 FBXL2Q9UKC9 423 aa17.33■□□□□ 0.37
COL4A3BP-201ENST00000261415 B3GALT1Q9Y5Z6 326 aa17.33■□□□□ 0.37
COL4A3BP-201ENST00000261415 CEP250Q9BV73 2442 aa17.33■□□□□ 0.37
COL4A3BP-201ENST00000261415 A0A0G2JPF8 293 aa17.33■□□□□ 0.36
COL4A3BP-201ENST00000261415 HNRNPCL3B7ZW38 293 aa17.33■□□□□ 0.36
COL4A3BP-201ENST00000261415 S100A9P06702 114 aaKnown RBP17.33■□□□□ 0.36
COL4A3BP-201ENST00000261415 HNRNPCL4P0DMR1 293 aa17.33■□□□□ 0.36
COL4A3BP-201ENST00000261415 EFNA3P52797 238 aa17.33■□□□□ 0.36
COL4A3BP-201ENST00000261415 DCAF12Q5T6F0 453 aa17.33■□□□□ 0.36
COL4A3BP-201ENST00000261415 HACD4Q5VWC8 232 aa17.33■□□□□ 0.36
COL4A3BP-201ENST00000261415 LIPKQ5VXJ0 399 aa17.33■□□□□ 0.36
COL4A3BP-201ENST00000261415 PRSS58Q8IYP2 241 aa17.33■□□□□ 0.36
COL4A3BP-201ENST00000261415 OR2L13Q8N349 312 aa17.33■□□□□ 0.36
COL4A3BP-201ENST00000261415 NUP43Q8NFH3 380 aa17.33■□□□□ 0.36
COL4A3BP-201ENST00000261415 OR2T35Q8NGX2 323 aa17.33■□□□□ 0.36
COL4A3BP-201ENST00000261415 MOSPD2Q8NHP6 518 aa17.33■□□□□ 0.36
COL4A3BP-201ENST00000261415 STT3BQ8TCJ2 826 aa17.33■□□□□ 0.36
COL4A3BP-201ENST00000261415 DOK4Q8TEW6 326 aa17.33■□□□□ 0.36
COL4A3BP-201ENST00000261415 LRRC46Q96FV0 321 aa17.33■□□□□ 0.36
COL4A3BP-201ENST00000261415 RBM18Q96H35 190 aaKnown RBP17.33■□□□□ 0.36
COL4A3BP-201ENST00000261415 C7orf34Q96L11 122 aa17.33■□□□□ 0.36
COL4A3BP-201ENST00000261415 PDCD10Q9BUL8 212 aa17.33■□□□□ 0.36
COL4A3BP-201ENST00000261415 NKX6-2Q9C056 277 aaPredicted RBP17.33■□□□□ 0.36
COL4A3BP-201ENST00000261415 NTMQ9P121 344 aa17.33■□□□□ 0.36
COL4A3BP-201ENST00000261415 PTGFRNQ9P2B2 879 aa17.33■□□□□ 0.36
COL4A3BP-201ENST00000261415 REV1Q9UBZ9 1251 aa17.33■□□□□ 0.36
COL4A3BP-201ENST00000261415 CCDC187A0A096LP49 1063 aa17.32■□□□□ 0.36
COL4A3BP-201ENST00000261415 TEX13CA0A0J9YWL9 993 aa17.32■□□□□ 0.36
COL4A3BP-201ENST00000261415 A0A1B0GW55 424 aa17.32■□□□□ 0.36
COL4A3BP-201ENST00000261415 TMEM82A0PJX8 343 aa17.32■□□□□ 0.36
COL4A3BP-201ENST00000261415 FAM74A7A6NL05 159 aa17.32■□□□□ 0.36
COL4A3BP-201ENST00000261415 HMGN2P05204 90 aaKnown RBP17.32■□□□□ 0.36
COL4A3BP-201ENST00000261415 CT62P0C5K7 136 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms