RNA–Protein interactions for RNA: ENST00000258962.4

SRSF1-201, Transcript of serine and arginine rich splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-201ENST00000258962 OR13F1Q8NGS4 319 aa15.78■□□□□ 0.12
SRSF1-201ENST00000258962 ST8SIA1Q92185 356 aa15.78■□□□□ 0.12
SRSF1-201ENST00000258962 HAS2Q92819 552 aa15.78■□□□□ 0.12
SRSF1-201ENST00000258962 NTNG2Q96CW9 530 aa15.78■□□□□ 0.12
SRSF1-201ENST00000258962 FRMD6Q96NE9 622 aa15.78■□□□□ 0.12
SRSF1-201ENST00000258962 IFT27Q9BW83 186 aa15.78■□□□□ 0.12
SRSF1-201ENST00000258962 ACOT13Q9NPJ3 140 aa15.78■□□□□ 0.12
SRSF1-201ENST00000258962 PLA2G3Q9NZ20 509 aa15.78■□□□□ 0.12
SRSF1-201ENST00000258962 LUZP4Q9P127 313 aa15.78■□□□□ 0.12
SRSF1-201ENST00000258962 TMED7Q9Y3B3 224 aa15.78■□□□□ 0.12
SRSF1-201ENST00000258962 ZNF337Q9Y3M9 751 aa15.78■□□□□ 0.12
SRSF1-201ENST00000258962 TNFSF12-TNFSF13A0A0A6YY99 330 aa15.77■□□□□ 0.11
SRSF1-201ENST00000258962 TMEM72A0PK05 275 aa15.77■□□□□ 0.11
SRSF1-201ENST00000258962 ZC3H12DA2A288 527 aaKnown RBP15.77■□□□□ 0.11
SRSF1-201ENST00000258962 SUSD5O60279 629 aa15.77■□□□□ 0.11
SRSF1-201ENST00000258962 SEC14L2O76054 403 aa15.77■□□□□ 0.11
SRSF1-201ENST00000258962 INMTO95050 263 aa15.77■□□□□ 0.11
SRSF1-201ENST00000258962 MSX1P28360 303 aa15.77■□□□□ 0.11
SRSF1-201ENST00000258962 SLC6A6P31641 620 aa15.77■□□□□ 0.11
SRSF1-201ENST00000258962 GP2P55259 537 aaKnown RBP15.77■□□□□ 0.11
SRSF1-201ENST00000258962 TLE1Q04724 770 aa15.77■□□□□ 0.11
SRSF1-201ENST00000258962 IRF3Q14653 427 aa15.77■□□□□ 0.11
SRSF1-201ENST00000258962 ZNF468Q5VIY5 522 aaPredicted RBP15.77■□□□□ 0.11
SRSF1-201ENST00000258962 PRAMEF20Q5VT98 475 aa15.77■□□□□ 0.11
SRSF1-201ENST00000258962 AADACL4Q5VUY2 407 aa15.77■□□□□ 0.11
SRSF1-201ENST00000258962 C1QL3Q5VWW1 255 aa15.77■□□□□ 0.11
SRSF1-201ENST00000258962 ARSKQ6UWY0 536 aa15.77■□□□□ 0.11
SRSF1-201ENST00000258962 RTL4Q6ZR62 310 aa15.77■□□□□ 0.11
SRSF1-201ENST00000258962 DND1Q8IYX4 353 aaKnown RBP15.77■□□□□ 0.11
SRSF1-201ENST00000258962 CYP4Z2PQ8N1L4 340 aa15.77■□□□□ 0.11
SRSF1-201ENST00000258962 ANKK1Q8NFD2 765 aa15.77■□□□□ 0.11
SRSF1-201ENST00000258962 OR2M3Q8NG83 312 aa15.77■□□□□ 0.11
SRSF1-201ENST00000258962 TMEM234Q8WY98 164 aa15.77■□□□□ 0.11
SRSF1-201ENST00000258962 FCGR1BQ92637 280 aa15.77■□□□□ 0.11
SRSF1-201ENST00000258962 TAAR8Q969N4 342 aa15.77■□□□□ 0.11
SRSF1-201ENST00000258962 PLEKHA8Q96JA3 519 aa15.77■□□□□ 0.11
SRSF1-201ENST00000258962 SECISBP2Q96T21 854 aaKnown RBP15.77■□□□□ 0.11
SRSF1-201ENST00000258962 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.77■□□□□ 0.11
SRSF1-201ENST00000258962 HINT3Q9NQE9 182 aaKnown RBP15.77■□□□□ 0.11
SRSF1-201ENST00000258962 SDHAF3Q9NRP4 125 aa15.77■□□□□ 0.11
SRSF1-201ENST00000258962 PCDHGB6Q9Y5F9 930 aa15.77■□□□□ 0.11
SRSF1-201ENST00000258962 SNTNA6NMZ2 147 aa15.76■□□□□ 0.11
SRSF1-201ENST00000258962 MCIDASD6RGH6 385 aa15.76■□□□□ 0.11
SRSF1-201ENST00000258962 ETV2O00321 342 aaPredicted RBP15.76■□□□□ 0.11
SRSF1-201ENST00000258962 NPIPB7O75200 414 aa15.76■□□□□ 0.11
SRSF1-201ENST00000258962 NDUFB2O95178 105 aa15.76■□□□□ 0.11
SRSF1-201ENST00000258962 WDPCPO95876 746 aa15.76■□□□□ 0.11
SRSF1-201ENST00000258962 ASAH2BP0C7U1 165 aa15.76■□□□□ 0.11
SRSF1-201ENST00000258962 CCL3P10147 92 aa15.76■□□□□ 0.11
SRSF1-201ENST00000258962 PLA2G2AP14555 144 aa15.76■□□□□ 0.11
SRSF1-201ENST00000258962 SNTA1Q13424 505 aa15.76■□□□□ 0.11
SRSF1-201ENST00000258962 SLC35F1Q5T1Q4 408 aa15.76■□□□□ 0.11
SRSF1-201ENST00000258962 CLVS1Q8IUQ0 354 aaPredicted RBP15.76■□□□□ 0.11
SRSF1-201ENST00000258962 STX19Q8N4C7 294 aa15.76■□□□□ 0.11
SRSF1-201ENST00000258962 TMEM156Q8N614 296 aa15.76■□□□□ 0.11
SRSF1-201ENST00000258962 FADS6Q8N9I5 356 aa15.76■□□□□ 0.11
SRSF1-201ENST00000258962 WDSUB1Q8N9V3 476 aa15.76■□□□□ 0.11
SRSF1-201ENST00000258962 PAQR8Q8TEZ7 354 aa15.76■□□□□ 0.11
SRSF1-201ENST00000258962 RORBQ92753 470 aa15.76■□□□□ 0.11
SRSF1-201ENST00000258962 PTDSS2Q9BVG9 487 aa15.76■□□□□ 0.11
SRSF1-201ENST00000258962 RNF32Q9H0A6 362 aa15.76■□□□□ 0.11
SRSF1-201ENST00000258962 PROK2Q9HC23 129 aa15.76■□□□□ 0.11
SRSF1-201ENST00000258962 CMC2Q9NRP2 79 aa15.76■□□□□ 0.11
SRSF1-201ENST00000258962 RYDENQ9NUL5 291 aaKnown RBP15.76■□□□□ 0.11
SRSF1-201ENST00000258962 BAIAP2Q9UQB8 552 aa15.76■□□□□ 0.11
SRSF1-201ENST00000258962 RPL36Q9Y3U8 105 aaKnown RBP15.76■□□□□ 0.11
SRSF1-201ENST00000258962 TRAV36DV7A0A075B6V5 113 aa15.75■□□□□ 0.11
SRSF1-201ENST00000258962 ZNF99A8MXY4 864 aaPredicted RBP15.75■□□□□ 0.11
SRSF1-201ENST00000258962 PRODHO43272 600 aa15.75■□□□□ 0.11
SRSF1-201ENST00000258962 BGLAPP02818 100 aa15.75■□□□□ 0.11
SRSF1-201ENST00000258962 ACVR2AP27037 513 aa15.75■□□□□ 0.11
SRSF1-201ENST00000258962 HTR3AP46098 478 aa15.75■□□□□ 0.11
SRSF1-201ENST00000258962 RPS5P46782 204 aaKnown RBP15.75■□□□□ 0.11
SRSF1-201ENST00000258962 TMBIM6P55061 237 aa15.75■□□□□ 0.11
SRSF1-201ENST00000258962 FOXF1Q12946 379 aa15.75■□□□□ 0.11
SRSF1-201ENST00000258962 ZNF169Q14929 603 aaPredicted RBP15.75■□□□□ 0.11
SRSF1-201ENST00000258962 TBCEQ15813 527 aaPredicted RBP15.75■□□□□ 0.11
SRSF1-201ENST00000258962 ZNF362Q5T0B9 420 aaPredicted RBP15.75■□□□□ 0.11
SRSF1-201ENST00000258962 IGFN1Q86VF2 1251 aa15.75■□□□□ 0.11
SRSF1-201ENST00000258962 BEST3Q8N1M1 668 aa15.75■□□□□ 0.11
SRSF1-201ENST00000258962 C10orf53Q8N6V4 93 aa15.75■□□□□ 0.11
SRSF1-201ENST00000258962 BBS1Q8NFJ9 593 aa15.75■□□□□ 0.11
SRSF1-201ENST00000258962 MOSPD2Q8NHP6 518 aa15.75■□□□□ 0.11
SRSF1-201ENST00000258962 NMD3Q96D46 503 aaKnown RBP15.75■□□□□ 0.11
SRSF1-201ENST00000258962 UTP23Q9BRU9 249 aaKnown RBP15.75■□□□□ 0.11
SRSF1-201ENST00000258962 TAPBPLQ9BX59 468 aa15.75■□□□□ 0.11
SRSF1-201ENST00000258962 ANGPTL4Q9BY76 406 aa15.75■□□□□ 0.11
SRSF1-201ENST00000258962 FN3KQ9H479 309 aa15.75■□□□□ 0.11
SRSF1-201ENST00000258962 NANSQ9NR45 359 aa15.75■□□□□ 0.11
SRSF1-201ENST00000258962 HPF1Q9NWY4 346 aa15.75■□□□□ 0.11
SRSF1-201ENST00000258962 TAS2R16Q9NYV7 291 aa15.75■□□□□ 0.11
SRSF1-201ENST00000258962 CHRNA9Q9UGM1 479 aa15.75■□□□□ 0.11
SRSF1-201ENST00000258962 FBXL2Q9UKC9 423 aa15.75■□□□□ 0.11
SRSF1-201ENST00000258962 VDAC3Q9Y277 283 aa15.75■□□□□ 0.11
SRSF1-201ENST00000258962 HIF3AQ9Y2N7 669 aa15.75■□□□□ 0.11
SRSF1-201ENST00000258962 CSAG2Q9Y5P2 127 aa15.75■□□□□ 0.11
SRSF1-201ENST00000258962 TRAV17A0A0B4J275 112 aa15.74■□□□□ 0.11
SRSF1-201ENST00000258962 OR5H15A6NDH6 313 aa15.74■□□□□ 0.11
SRSF1-201ENST00000258962 FAM183AA6NL82 134 aa15.74■□□□□ 0.11
SRSF1-201ENST00000258962 J3QKU1 62 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms