RNA–Protein interactions for RNA: ENST00000258499.7

USP44-201, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 4,022 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-201ENST00000258499 EMDP50402 254 aa4.37□□□□□ -1.71
USP44-201ENST00000258499 HHEXQ03014 270 aa4.37□□□□□ -1.71
USP44-201ENST00000258499 HTR4Q13639 388 aa4.37□□□□□ -1.71
USP44-201ENST00000258499 GRM7Q14831 915 aa4.37□□□□□ -1.71
USP44-201ENST00000258499 OPCMLQ14982 345 aa4.37□□□□□ -1.71
USP44-201ENST00000258499 ST3GAL2Q16842 350 aa4.37□□□□□ -1.71
USP44-201ENST00000258499 NKPD1Q17RQ9 610 aa4.37□□□□□ -1.71
USP44-201ENST00000258499 FAM209AQ5JX71 171 aa4.37□□□□□ -1.71
USP44-201ENST00000258499 CD276Q5ZPR3 534 aa4.37□□□□□ -1.71
USP44-201ENST00000258499 FBXO42Q6P3S6 717 aa4.37□□□□□ -1.71
USP44-201ENST00000258499 RPL22L1Q6P5R6 122 aaKnown RBP4.37□□□□□ -1.71
USP44-201ENST00000258499 LRFN4Q6PJG9 635 aa4.37□□□□□ -1.71
USP44-201ENST00000258499 FAM198BQ6UWH4 519 aa4.37□□□□□ -1.71
USP44-201ENST00000258499 C3P1Q6ZMU1 363 aa4.37□□□□□ -1.71
USP44-201ENST00000258499 Q6ZSR6 202 aa4.37□□□□□ -1.71
USP44-201ENST00000258499 KRT77Q7Z794 578 aa4.37□□□□□ -1.71
USP44-201ENST00000258499 RASGRP3Q8IV61 690 aa4.37□□□□□ -1.71
USP44-201ENST00000258499 LSM14AQ8ND56 463 aaKnown RBP4.37□□□□□ -1.71
USP44-201ENST00000258499 ZNF248Q8NDW4 579 aa4.37□□□□□ -1.71
USP44-201ENST00000258499 OR11H7Q8NGC8 314 aa4.37□□□□□ -1.71
USP44-201ENST00000258499 DVL3Q92997 716 aaPredicted RBP4.37□□□□□ -1.71
USP44-201ENST00000258499 ZNF707Q96C28 371 aaPredicted RBP4.37□□□□□ -1.71
USP44-201ENST00000258499 PELI1Q96FA3 418 aa4.37□□□□□ -1.71
USP44-201ENST00000258499 MED30Q96HR3 178 aa4.37□□□□□ -1.71
USP44-201ENST00000258499 CMKLR1Q99788 373 aa4.37□□□□□ -1.71
USP44-201ENST00000258499 TBL1XR1Q9BZK7 514 aa4.37□□□□□ -1.71
USP44-201ENST00000258499 EMC7Q9NPA0 242 aa4.37□□□□□ -1.71
USP44-201ENST00000258499 FBXL21Q9UKT6 434 aa4.37□□□□□ -1.71
USP44-201ENST00000258499 COPS3Q9UNS2 423 aa4.37□□□□□ -1.71
USP44-201ENST00000258499 CAMK2AQ9UQM7 478 aa4.37□□□□□ -1.71
USP44-201ENST00000258499 PLEKHA6Q9Y2H5 1048 aa4.37□□□□□ -1.71
USP44-201ENST00000258499 ZNF281Q9Y2X9 895 aa4.37□□□□□ -1.71
USP44-201ENST00000258499 NOP16Q9Y3C1 178 aaKnown RBP4.37□□□□□ -1.71
USP44-201ENST00000258499 IMPA2O14732 288 aa4.36□□□□□ -1.71
USP44-201ENST00000258499 GMDSO60547 372 aa4.36□□□□□ -1.71
USP44-201ENST00000258499 PPM1BO75688 479 aa4.36□□□□□ -1.71
USP44-201ENST00000258499 TNFP01375 233 aa4.36□□□□□ -1.71
USP44-201ENST00000258499 ZNF250P15622 560 aa4.36□□□□□ -1.71
USP44-201ENST00000258499 MAPK3P27361 379 aaPredicted RBP4.36□□□□□ -1.71
USP44-201ENST00000258499 RAD52P43351 418 aa4.36□□□□□ -1.71
USP44-201ENST00000258499 ADPRHP54922 357 aa4.36□□□□□ -1.71
USP44-201ENST00000258499 PER3P56645 1201 aa4.36□□□□□ -1.71
USP44-201ENST00000258499 KCNAB1Q14722 419 aa4.36□□□□□ -1.71
USP44-201ENST00000258499 CDK5R1Q15078 307 aa4.36□□□□□ -1.71
USP44-201ENST00000258499 TAF13Q15543 124 aa4.36□□□□□ -1.71
USP44-201ENST00000258499 SMAD2Q15796 467 aaKnown RBP4.36□□□□□ -1.71
USP44-201ENST00000258499 SLC25A30Q5SVS4 291 aa4.36□□□□□ -1.71
USP44-201ENST00000258499 LIPNQ5VXI9 398 aa4.36□□□□□ -1.71
USP44-201ENST00000258499 RNLSQ5VYX0 342 aa4.36□□□□□ -1.71
USP44-201ENST00000258499 ELP2Q6IA86 826 aa4.36□□□□□ -1.71
USP44-201ENST00000258499 MRM1Q6IN84 353 aaKnown RBP4.36□□□□□ -1.71
USP44-201ENST00000258499 TEX261Q6UWH6 196 aa4.36□□□□□ -1.71
USP44-201ENST00000258499 KIRREL2Q6UWL6 708 aa4.36□□□□□ -1.71
USP44-201ENST00000258499 AVL9Q8NBF6 648 aa4.36□□□□□ -1.71
USP44-201ENST00000258499 OR51D1Q8NGF3 324 aa4.36□□□□□ -1.71
USP44-201ENST00000258499 THAP3Q8WTV1 239 aaPredicted RBP4.36□□□□□ -1.71
USP44-201ENST00000258499 VOPP1Q96AW1 172 aa4.36□□□□□ -1.71
USP44-201ENST00000258499 SMIM19Q96E16 107 aa4.36□□□□□ -1.71
USP44-201ENST00000258499 ZNF681Q96N22 645 aa4.36□□□□□ -1.71
USP44-201ENST00000258499 SFXN2Q96NB2 322 aa4.36□□□□□ -1.71
USP44-201ENST00000258499 ADOQ96SZ5 270 aa4.36□□□□□ -1.71
USP44-201ENST00000258499 RPP25Q9BUL9 199 aaKnown RBP4.36□□□□□ -1.71
USP44-201ENST00000258499 ZNF436Q9C0F3 470 aaPredicted RBP4.36□□□□□ -1.71
USP44-201ENST00000258499 AICDAQ9GZX7 198 aa4.36□□□□□ -1.71
USP44-201ENST00000258499 SFXN1Q9H9B4 322 aa4.36□□□□□ -1.71
USP44-201ENST00000258499 CD93Q9NPY3 652 aa4.36□□□□□ -1.71
USP44-201ENST00000258499 DUSP22Q9NRW4 184 aa4.36□□□□□ -1.71
USP44-201ENST00000258499 B3GNT2Q9NY97 397 aa4.36□□□□□ -1.71
USP44-201ENST00000258499 LRIT1Q9P2V4 623 aa4.36□□□□□ -1.71
USP44-201ENST00000258499 CPNE7Q9UBL6 633 aa4.36□□□□□ -1.71
USP44-201ENST00000258499 RWDD3Q9Y3V2 267 aa4.36□□□□□ -1.71
USP44-201ENST00000258499 U3KQ87 197 aa4.36□□□□□ -1.71
USP44-201ENST00000258499 A0A1B0GTH9 108 aa4.36□□□□□ -1.71
USP44-201ENST00000258499 ACOT7O00154 380 aa4.36□□□□□ -1.71
USP44-201ENST00000258499 SOX1O00570 391 aaPredicted RBP4.36□□□□□ -1.71
USP44-201ENST00000258499 ZIC2O95409 532 aaPredicted RBP4.36□□□□□ -1.71
USP44-201ENST00000258499 APBB3O95704 486 aa4.36□□□□□ -1.71
USP44-201ENST00000258499 PLATP00750 562 aa4.36□□□□□ -1.71
USP44-201ENST00000258499 IGHA1P01876 353 aa4.36□□□□□ -1.71
USP44-201ENST00000258499 HPXP02790 462 aa4.36□□□□□ -1.71
USP44-201ENST00000258499 IFNA6P05013 189 aa4.36□□□□□ -1.71
USP44-201ENST00000258499 THBS1P07996 1170 aa4.36□□□□□ -1.71
USP44-201ENST00000258499 CT62P0C5K7 136 aa4.36□□□□□ -1.71
USP44-201ENST00000258499 APEHP13798 732 aaKnown RBP4.36□□□□□ -1.71
USP44-201ENST00000258499 MAOAP21397 527 aa4.36□□□□□ -1.71
USP44-201ENST00000258499 PTBP1P26599 531 aaKnown RBP eCLIP4.36□□□□□ -1.71
USP44-201ENST00000258499 NUP62P37198 522 aaPredicted RBP4.36□□□□□ -1.71
USP44-201ENST00000258499 FRKP42685 505 aaPredicted RBP4.36□□□□□ -1.71
USP44-201ENST00000258499 LTBQ06643 244 aa4.36□□□□□ -1.71
USP44-201ENST00000258499 CAMK2BQ13554 666 aa4.36□□□□□ -1.71
USP44-201ENST00000258499 ZIC1Q15915 447 aa4.36□□□□□ -1.71
USP44-201ENST00000258499 COL28A1Q2UY09 1125 aa4.36□□□□□ -1.71
USP44-201ENST00000258499 BEX5Q5H9J7 111 aa4.36□□□□□ -1.71
USP44-201ENST00000258499 GARNL3Q5VVW2 1013 aa4.36□□□□□ -1.71
USP44-201ENST00000258499 OLFML2AQ68BL7 652 aa4.36□□□□□ -1.71
USP44-201ENST00000258499 HEPHL1Q6MZM0 1159 aa4.36□□□□□ -1.71
USP44-201ENST00000258499 BTN2A1Q7KYR7 527 aa4.36□□□□□ -1.71
USP44-201ENST00000258499 NR2C2APQ86WQ0 139 aa4.36□□□□□ -1.71
USP44-201ENST00000258499 SFTPA2Q8IWL1 248 aa4.36□□□□□ -1.71
USP44-201ENST00000258499 ZNF687Q8N1G0 1237 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms