RNA–Protein interactions for RNA: ENST00000258349.8

RC3H1-201, Transcript of ring finger and CCCH-type domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RC3H1, Length 10,988 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-201ENST00000258349 RAB3CQ96E17 227 aa4.48□□□□□ -1.69
RC3H1-201ENST00000258349 DTD2Q96FN9 168 aa4.48□□□□□ -1.69
RC3H1-201ENST00000258349 RNF170Q96K19 258 aa4.48□□□□□ -1.69
RC3H1-201ENST00000258349 PCYT2Q99447 389 aa4.48□□□□□ -1.69
RC3H1-201ENST00000258349 EGLN3Q9H6Z9 239 aa4.48□□□□□ -1.69
RC3H1-201ENST00000258349 LIN7BQ9HAP6 207 aa4.48□□□□□ -1.69
RC3H1-201ENST00000258349 C1GALT1Q9NS00 363 aa4.48□□□□□ -1.69
RC3H1-201ENST00000258349 FTSJ1Q9UET6 329 aa4.48□□□□□ -1.69
RC3H1-201ENST00000258349 GPR160Q9UJ42 338 aa4.48□□□□□ -1.69
RC3H1-201ENST00000258349 MOKQ9UQ07 419 aa4.48□□□□□ -1.69
RC3H1-201ENST00000258349 TMX2-CTNND1H3BSU7 103 aa4.48□□□□□ -1.69
RC3H1-201ENST00000258349 SGK494L7N484 410 aa4.48□□□□□ -1.69
RC3H1-201ENST00000258349 SEC14L5O43304 696 aa4.48□□□□□ -1.69
RC3H1-201ENST00000258349 CLN5O75503 358 aa4.48□□□□□ -1.69
RC3H1-201ENST00000258349 PROS1P07225 676 aa4.48□□□□□ -1.69
RC3H1-201ENST00000258349 CNR1P21554 472 aa4.48□□□□□ -1.69
RC3H1-201ENST00000258349 RPS25P62851 125 aaKnown RBP4.48□□□□□ -1.69
RC3H1-201ENST00000258349 SLC10A1Q14973 349 aa4.48□□□□□ -1.69
RC3H1-201ENST00000258349 EBPQ15125 230 aaKnown RBP4.48□□□□□ -1.69
RC3H1-201ENST00000258349 MRPL10Q7Z7H8 261 aaKnown RBP4.48□□□□□ -1.69
RC3H1-201ENST00000258349 C1orf87Q8N0U7 546 aa4.48□□□□□ -1.69
RC3H1-201ENST00000258349 FAM174AQ8TBP5 190 aa4.48□□□□□ -1.69
RC3H1-201ENST00000258349 COQ3Q9NZJ6 369 aa4.48□□□□□ -1.69
RC3H1-201ENST00000258349 SUSD2Q9UGT4 822 aa4.48□□□□□ -1.69
RC3H1-201ENST00000258349 PRELID3BQ9Y3B1 194 aa4.48□□□□□ -1.69
RC3H1-201ENST00000258349 UGT2A1Q9Y4X1 527 aa4.48□□□□□ -1.69
RC3H1-201ENST00000258349 SHANK3Q9BYB0 1731 aa4.48□□□□□ -1.69
RC3H1-201ENST00000258349 LRRK1Q38SD2 2015 aa4.48□□□□□ -1.69
RC3H1-201ENST00000258349 RPS10-NUDT3A0A1W2PQS6 291 aa4.48□□□□□ -1.69
RC3H1-201ENST00000258349 PLSCR5A0PG75 271 aa4.48□□□□□ -1.69
RC3H1-201ENST00000258349 POM121CA8CG34 1229 aa4.48□□□□□ -1.69
RC3H1-201ENST00000258349 GABARAPH6UMI1 98 aa4.48□□□□□ -1.69
RC3H1-201ENST00000258349 IMPA2O14732 288 aa4.48□□□□□ -1.69
RC3H1-201ENST00000258349 GABARAPO95166 117 aa4.48□□□□□ -1.69
RC3H1-201ENST00000258349 SEMA4FO95754 770 aa4.48□□□□□ -1.69
RC3H1-201ENST00000258349 SNAI1O95863 264 aaPredicted RBP4.48□□□□□ -1.69
RC3H1-201ENST00000258349 SRMP19623 302 aa4.48□□□□□ -1.69
RC3H1-201ENST00000258349 C21orf33P30042 268 aaPredicted RBP4.48□□□□□ -1.69
RC3H1-201ENST00000258349 OTX2P32243 289 aa4.48□□□□□ -1.69
RC3H1-201ENST00000258349 RPS10P46783 165 aaKnown RBP4.48□□□□□ -1.69
RC3H1-201ENST00000258349 HOXA1P49639 335 aaPredicted RBP4.48□□□□□ -1.69
RC3H1-201ENST00000258349 TLE1Q04724 770 aa4.48□□□□□ -1.69
RC3H1-201ENST00000258349 RPE65Q16518 533 aa4.48□□□□□ -1.69
RC3H1-201ENST00000258349 BAK1Q16611 211 aa4.48□□□□□ -1.69
RC3H1-201ENST00000258349 ZNF684Q5T5D7 378 aa4.48□□□□□ -1.69
RC3H1-201ENST00000258349 CBLL1Q75N03 491 aa4.48□□□□□ -1.69
RC3H1-201ENST00000258349 GPR155Q7Z3F1 870 aa4.48□□□□□ -1.69
RC3H1-201ENST00000258349 APCDD1Q8J025 514 aa4.48□□□□□ -1.69
RC3H1-201ENST00000258349 PRR18Q8N4B5 295 aa4.48□□□□□ -1.69
RC3H1-201ENST00000258349 KHSRPQ92945 711 aaKnown RBP eCLIP4.48□□□□□ -1.696e-7■■■□□ 19.2
RC3H1-201ENST00000258349 DNAJA3Q96EY1 480 aa4.48□□□□□ -1.69
RC3H1-201ENST00000258349 GPR174Q9BXC1 333 aa4.48□□□□□ -1.69
RC3H1-201ENST00000258349 WDR76Q9H967 626 aa4.48□□□□□ -1.69
RC3H1-201ENST00000258349 PRDM9Q9NQV7 894 aa4.48□□□□□ -1.69
RC3H1-201ENST00000258349 NENFQ9UMX5 172 aa4.48□□□□□ -1.69
RC3H1-201ENST00000258349 A3GALT2U3KPV4 340 aa4.48□□□□□ -1.69
RC3H1-201ENST00000258349 CEP192Q8TEP8 1941 aa4.48□□□□□ -1.69
RC3H1-201ENST00000258349 OR2C1O95371 312 aa4.47□□□□□ -1.69
RC3H1-201ENST00000258349 NSA2O95478 260 aaKnown RBP4.47□□□□□ -1.69
RC3H1-201ENST00000258349 SFTPDP35247 375 aa4.47□□□□□ -1.69
RC3H1-201ENST00000258349 HBA1P69905 142 aa4.47□□□□□ -1.69
RC3H1-201ENST00000258349 CXADRP78310 365 aa4.47□□□□□ -1.69
RC3H1-201ENST00000258349 MRPS34P82930 218 aaKnown RBP4.47□□□□□ -1.69
RC3H1-201ENST00000258349 RNLSQ5VYX0 342 aa4.47□□□□□ -1.69
RC3H1-201ENST00000258349 PTRH1Q86Y79 214 aaKnown RBP4.47□□□□□ -1.69
RC3H1-201ENST00000258349 MFSD9Q8NBP5 474 aa4.47□□□□□ -1.69
RC3H1-201ENST00000258349 OR1J2Q8NGS2 313 aa4.47□□□□□ -1.69
RC3H1-201ENST00000258349 GGHQ92820 318 aa4.47□□□□□ -1.69
RC3H1-201ENST00000258349 RSPRY1Q96DX4 576 aa4.47□□□□□ -1.69
RC3H1-201ENST00000258349 HHIPL1Q96JK4 782 aa4.47□□□□□ -1.69
RC3H1-201ENST00000258349 PAPPA2Q9BXP8 1791 aa4.47□□□□□ -1.69
RC3H1-201ENST00000258349 TRDV1A0A1B0GX56 115 aa4.47□□□□□ -1.69
RC3H1-201ENST00000258349 POU3F2P20265 443 aaPredicted RBP4.47□□□□□ -1.69
RC3H1-201ENST00000258349 PSMB1P20618 241 aaKnown RBP4.47□□□□□ -1.69
RC3H1-201ENST00000258349 HOXC13P31276 330 aa4.47□□□□□ -1.69
RC3H1-201ENST00000258349 S100A11P31949 105 aa4.47□□□□□ -1.69
RC3H1-201ENST00000258349 PSMB10P40306 273 aa4.47□□□□□ -1.69
RC3H1-201ENST00000258349 PSMB3P49720 205 aa4.47□□□□□ -1.69
RC3H1-201ENST00000258349 CAMK2BQ13554 666 aa4.47□□□□□ -1.69
RC3H1-201ENST00000258349 C11orf91Q3C1V1 193 aa4.47□□□□□ -1.69
RC3H1-201ENST00000258349 MRPL2Q5T653 305 aaKnown RBP4.47□□□□□ -1.69
RC3H1-201ENST00000258349 KDM4DQ6B0I6 523 aa4.47□□□□□ -1.69
RC3H1-201ENST00000258349 SLC51BQ86UW2 128 aa4.47□□□□□ -1.69
RC3H1-201ENST00000258349 CD163Q86VB7 1156 aa4.47□□□□□ -1.69
RC3H1-201ENST00000258349 CYB561A3Q8NBI2 242 aa4.47□□□□□ -1.69
RC3H1-201ENST00000258349 OR9K2Q8NGE7 335 aa4.47□□□□□ -1.69
RC3H1-201ENST00000258349 FAM71F1Q96KD3 344 aaPredicted RBP4.47□□□□□ -1.69
RC3H1-201ENST00000258349 TMEM59Q9BXS4 323 aa4.47□□□□□ -1.69
RC3H1-201ENST00000258349 KCMF1Q9P0J7 381 aa4.47□□□□□ -1.69
RC3H1-201ENST00000258349 C5AR2Q9P296 337 aa4.47□□□□□ -1.69
RC3H1-201ENST00000258349 DNAJB11Q9UBS4 358 aa4.47□□□□□ -1.69
RC3H1-201ENST00000258349 PSORS1C1Q9UIG5 152 aa4.47□□□□□ -1.69
RC3H1-201ENST00000258349 RAB22AQ9UL26 194 aa4.47□□□□□ -1.69
RC3H1-201ENST00000258349 CAMK2AQ9UQM7 478 aa4.47□□□□□ -1.69
RC3H1-201ENST00000258349 HCFC1P51610 2035 aa4.47□□□□□ -1.69
RC3H1-201ENST00000258349 F6UZH7 168 aa4.47□□□□□ -1.69
RC3H1-201ENST00000258349 SLC16A6O15403 523 aa4.47□□□□□ -1.69
RC3H1-201ENST00000258349 SUSD5O60279 629 aa4.47□□□□□ -1.69
RC3H1-201ENST00000258349 GNB3P16520 340 aa4.47□□□□□ -1.69
RC3H1-201ENST00000258349 JUNBP17275 347 aaPredicted RBP4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms