RNA–Protein interactions for RNA: ENST00000257262.12

TMEM258-201, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 468 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-201ENST00000257262 P2RY4P51582 365 aa7.55□□□□□ -1.2
TMEM258-201ENST00000257262 SLC16A1P53985 500 aa7.55□□□□□ -1.2
TMEM258-201ENST00000257262 LTBQ06643 244 aa7.55□□□□□ -1.2
TMEM258-201ENST00000257262 SLC17A1Q14916 467 aa7.55□□□□□ -1.2
TMEM258-201ENST00000257262 DAZAP2Q15038 168 aaPredicted RBP7.55□□□□□ -1.2
TMEM258-201ENST00000257262 CYBRD1Q53TN4 286 aa7.55□□□□□ -1.2
TMEM258-201ENST00000257262 ZNF613Q6PF04 617 aa7.55□□□□□ -1.2
TMEM258-201ENST00000257262 STAC2Q6ZMT1 411 aa7.55□□□□□ -1.2
TMEM258-201ENST00000257262 TSPYL5Q86VY4 417 aaPredicted RBP7.55□□□□□ -1.2
TMEM258-201ENST00000257262 CXorf67Q86X51 503 aaPredicted RBP7.55□□□□□ -1.2
TMEM258-201ENST00000257262 CARM1Q86X55 608 aa7.55□□□□□ -1.2
TMEM258-201ENST00000257262 ZNF100Q8IYN0 542 aa7.55□□□□□ -1.2
TMEM258-201ENST00000257262 GABRG1Q8N1C3 465 aa7.55□□□□□ -1.2
TMEM258-201ENST00000257262 RNF148Q8N7C7 305 aa7.55□□□□□ -1.2
TMEM258-201ENST00000257262 ADAMTS16Q8TE57 1224 aa7.55□□□□□ -1.2
TMEM258-201ENST00000257262 PROX1Q92786 737 aa7.55□□□□□ -1.2
TMEM258-201ENST00000257262 TPD52L3Q96J77 140 aa7.55□□□□□ -1.2
TMEM258-201ENST00000257262 DACH2Q96NX9 599 aa7.55□□□□□ -1.2
TMEM258-201ENST00000257262 SPAG4Q9NPE6 437 aa7.55□□□□□ -1.2
TMEM258-201ENST00000257262 FANCFQ9NPI8 374 aa7.55□□□□□ -1.2
TMEM258-201ENST00000257262 ADA2Q9NZK5 511 aa7.55□□□□□ -1.2
TMEM258-201ENST00000257262 EMC3Q9P0I2 261 aa7.55□□□□□ -1.2
TMEM258-201ENST00000257262 ABCD2Q9UBJ2 740 aa7.55□□□□□ -1.2
TMEM258-201ENST00000257262 SEC14L4Q9UDX3 406 aa7.55□□□□□ -1.2
TMEM258-201ENST00000257262 SLC7A7Q9UM01 511 aa7.55□□□□□ -1.2
TMEM258-201ENST00000257262 NOSIPQ9Y314 301 aaKnown RBP7.55□□□□□ -1.2
TMEM258-201ENST00000257262 FLVCR1Q9Y5Y0 555 aa7.55□□□□□ -1.2
TMEM258-201ENST00000257262 SPTBN1Q01082 2364 aaKnown RBP7.55□□□□□ -1.2
TMEM258-201ENST00000257262 PDZD2O15018 2839 aa7.54□□□□□ -1.2
TMEM258-201ENST00000257262 APCP25054 2843 aa7.54□□□□□ -1.2
TMEM258-201ENST00000257262 TRAV36DV7A0A075B6V5 113 aa7.54□□□□□ -1.2
TMEM258-201ENST00000257262 TRAPPC13A5PLN9 417 aa7.54□□□□□ -1.2
TMEM258-201ENST00000257262 A6NNC1 897 aa7.54□□□□□ -1.2
TMEM258-201ENST00000257262 CHP2O43745 196 aa7.54□□□□□ -1.2
TMEM258-201ENST00000257262 CTAG2O75638 210 aa7.54□□□□□ -1.2
TMEM258-201ENST00000257262 IGHV3-9P01782 118 aa7.54□□□□□ -1.2
TMEM258-201ENST00000257262 GTF2E2P29084 291 aaKnown RBP7.54□□□□□ -1.2
TMEM258-201ENST00000257262 CCKARP32238 428 aa7.54□□□□□ -1.2
TMEM258-201ENST00000257262 SLC25A3Q00325 362 aa7.54□□□□□ -1.2
TMEM258-201ENST00000257262 KRT72Q14CN4 511 aa7.54□□□□□ -1.2
TMEM258-201ENST00000257262 TSC22D1Q15714 1073 aa7.54□□□□□ -1.2
TMEM258-201ENST00000257262 SFRP5Q5T4F7 317 aa7.54□□□□□ -1.2
TMEM258-201ENST00000257262 FAM69AQ5T7M9 428 aa7.54□□□□□ -1.2
TMEM258-201ENST00000257262 GLYATQ6IB77 296 aa7.54□□□□□ -1.2
TMEM258-201ENST00000257262 TTC33Q6PID6 262 aaPredicted RBP7.54□□□□□ -1.2
TMEM258-201ENST00000257262 C5orf46Q6UWT4 87 aa7.54□□□□□ -1.2
TMEM258-201ENST00000257262 WDR88Q6ZMY6 472 aa7.54□□□□□ -1.2
TMEM258-201ENST00000257262 DEF8Q6ZN54 512 aa7.54□□□□□ -1.2
TMEM258-201ENST00000257262 Q6ZT83 130 aa7.54□□□□□ -1.2
TMEM258-201ENST00000257262 CREB3L2Q70SY1 520 aa7.54□□□□□ -1.2
TMEM258-201ENST00000257262 CBLL1Q75N03 491 aa7.54□□□□□ -1.2
TMEM258-201ENST00000257262 GPAT4Q86UL3 456 aa7.54□□□□□ -1.2
TMEM258-201ENST00000257262 TMEM200AQ86VY9 491 aa7.54□□□□□ -1.2
TMEM258-201ENST00000257262 KDM8Q8N371 416 aa7.54□□□□□ -1.2
TMEM258-201ENST00000257262 ZIC4Q8N9L1 334 aa7.54□□□□□ -1.2
TMEM258-201ENST00000257262 CCDC197Q8NCU1 140 aa7.54□□□□□ -1.2
TMEM258-201ENST00000257262 FAM156AQ8NDB6 213 aa7.54□□□□□ -1.2
TMEM258-201ENST00000257262 SLC41A3Q96GZ6 507 aa7.54□□□□□ -1.2
TMEM258-201ENST00000257262 ZC3HAV1LQ96H79 300 aaKnown RBP7.54□□□□□ -1.2
TMEM258-201ENST00000257262 NSL1Q96IY1 281 aa7.54□□□□□ -1.2
TMEM258-201ENST00000257262 LURAP1Q96LR2 239 aa7.54□□□□□ -1.2
TMEM258-201ENST00000257262 ZNF385AQ96PM9 386 aaKnown RBP7.54□□□□□ -1.2
TMEM258-201ENST00000257262 KCTD14Q9BQ13 255 aaPredicted RBP7.54□□□□□ -1.2
TMEM258-201ENST00000257262 PRSS27Q9BQR3 290 aa7.54□□□□□ -1.2
TMEM258-201ENST00000257262 TMEM43Q9BTV4 400 aa7.54□□□□□ -1.2
TMEM258-201ENST00000257262 MED18Q9BUE0 208 aa7.54□□□□□ -1.2
TMEM258-201ENST00000257262 SF3B5Q9BWJ5 86 aaKnown RBP7.54□□□□□ -1.2
TMEM258-201ENST00000257262 POLDIP3Q9BY77 421 aaKnown RBP7.54□□□□□ -1.2
TMEM258-201ENST00000257262 PCDHAC1Q9H158 963 aa7.54□□□□□ -1.2
TMEM258-201ENST00000257262 RASSF1Q9NS23 344 aa7.54□□□□□ -1.2
TMEM258-201ENST00000257262 PARPBPQ9NWS1 579 aa7.54□□□□□ -1.2
TMEM258-201ENST00000257262 EGFL7Q9UHF1 273 aa7.54□□□□□ -1.2
TMEM258-201ENST00000257262 SLC9A8Q9Y2E8 581 aa7.54□□□□□ -1.2
TMEM258-201ENST00000257262 GPR52Q9Y2T5 361 aa7.54□□□□□ -1.2
TMEM258-201ENST00000257262 TESMINQ9Y4I5 508 aa7.54□□□□□ -1.2
TMEM258-201ENST00000257262 ADGRG4Q8IZF6 3080 aa7.54□□□□□ -1.2
TMEM258-201ENST00000257262 MPDZO75970 2070 aa7.53□□□□□ -1.2
TMEM258-201ENST00000257262 NOTCH2Q04721 2471 aa7.53□□□□□ -1.2
TMEM258-201ENST00000257262 LRRN3E7EW58 273 aa7.53□□□□□ -1.2
TMEM258-201ENST00000257262 MS4A18H0YCH9 400 aa7.53□□□□□ -1.2
TMEM258-201ENST00000257262 M0R082 166 aa7.53□□□□□ -1.2
TMEM258-201ENST00000257262 VAMP5O95183 116 aa7.53□□□□□ -1.2
TMEM258-201ENST00000257262 ZNF682O95780 498 aa7.53□□□□□ -1.2
TMEM258-201ENST00000257262 SERPINA1P01009 418 aa7.53□□□□□ -1.2
TMEM258-201ENST00000257262 BGLAPP02818 100 aa7.53□□□□□ -1.2
TMEM258-201ENST00000257262 THBDP07204 575 aa7.53□□□□□ -1.2
TMEM258-201ENST00000257262 GGT1P19440 569 aa7.53□□□□□ -1.2
TMEM258-201ENST00000257262 TCN1P20061 433 aaPredicted RBP7.53□□□□□ -1.2
TMEM258-201ENST00000257262 PSMB1P20618 241 aaKnown RBP7.53□□□□□ -1.2
TMEM258-201ENST00000257262 IGHV1-2P23083 117 aa7.53□□□□□ -1.2
TMEM258-201ENST00000257262 GRPRP30550 384 aa7.53□□□□□ -1.2
TMEM258-201ENST00000257262 MSX2P35548 267 aaPredicted RBP7.53□□□□□ -1.2
TMEM258-201ENST00000257262 TAS2R41P59536 307 aa7.53□□□□□ -1.2
TMEM258-201ENST00000257262 MXRA7P84157 204 aa7.53□□□□□ -1.2
TMEM258-201ENST00000257262 FAPQ12884 760 aa7.53□□□□□ -1.2
TMEM258-201ENST00000257262 FOXD4Q12950 439 aaPredicted RBP7.53□□□□□ -1.2
TMEM258-201ENST00000257262 ITGADQ13349 1161 aa7.53□□□□□ -1.2
TMEM258-201ENST00000257262 PIN1Q13526 163 aaPredicted RBP7.53□□□□□ -1.2
TMEM258-201ENST00000257262 P2RY6Q15077 328 aa7.53□□□□□ -1.2
TMEM258-201ENST00000257262 MS4A18Q3C1V0 323 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms