RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 ING1Q9UK53 422 aaPredicted RBP12.13□□□□□ -0.47
DDX39A-201ENST00000242776 ARFGEF3Q5TH69 2177 aa12.12□□□□□ -0.47
DDX39A-201ENST00000242776 OR5H1A6NKK0 313 aa12.12□□□□□ -0.47
DDX39A-201ENST00000242776 GJE1A6NN92 205 aa12.12□□□□□ -0.47
DDX39A-201ENST00000242776 C5orf58C9J3I9 102 aa12.12□□□□□ -0.47
DDX39A-201ENST00000242776 HMGN4O00479 90 aa12.12□□□□□ -0.47
DDX39A-201ENST00000242776 NME4O00746 187 aa12.12□□□□□ -0.47
DDX39A-201ENST00000242776 DNAJC8O75937 253 aaPredicted RBP12.12□□□□□ -0.47
DDX39A-201ENST00000242776 APEHP13798 732 aaKnown RBP12.12□□□□□ -0.47
DDX39A-201ENST00000242776 HNF1AP20823 631 aa12.12□□□□□ -0.47
DDX39A-201ENST00000242776 CD40P25942 277 aa12.12□□□□□ -0.47
DDX39A-201ENST00000242776 EIF1P41567 113 aaKnown RBP12.12□□□□□ -0.47
DDX39A-201ENST00000242776 RBBP4Q09028 425 aa12.12□□□□□ -0.47
DDX39A-201ENST00000242776 C9orf135Q5VTT2 229 aa12.12□□□□□ -0.47
DDX39A-201ENST00000242776 LIPNQ5VXI9 398 aa12.12□□□□□ -0.47
DDX39A-201ENST00000242776 NET1Q7Z628 596 aaPredicted RBP12.12□□□□□ -0.47
DDX39A-201ENST00000242776 TMCO5AQ8N6Q1 288 aa12.12□□□□□ -0.47
DDX39A-201ENST00000242776 ZNF433Q8N7K0 673 aaPredicted RBP12.12□□□□□ -0.47
DDX39A-201ENST00000242776 C11orf65Q8NCR3 313 aa12.12□□□□□ -0.47
DDX39A-201ENST00000242776 OR2T12Q8NG77 320 aa12.12□□□□□ -0.47
DDX39A-201ENST00000242776 FAM110BQ8TC76 370 aa12.12□□□□□ -0.47
DDX39A-201ENST00000242776 PROX1Q92786 737 aa12.12□□□□□ -0.47
DDX39A-201ENST00000242776 CDS1Q92903 461 aa12.12□□□□□ -0.47
DDX39A-201ENST00000242776 ZNF524Q96C55 264 aa12.12□□□□□ -0.47
DDX39A-201ENST00000242776 OR5B2Q96R09 309 aa12.12□□□□□ -0.47
DDX39A-201ENST00000242776 CDRT15Q96T59 188 aa12.12□□□□□ -0.47
DDX39A-201ENST00000242776 KCTD14Q9BQ13 255 aaPredicted RBP12.12□□□□□ -0.47
DDX39A-201ENST00000242776 USB1Q9BQ65 265 aaKnown RBP12.12□□□□□ -0.47
DDX39A-201ENST00000242776 PRR14Q9BWN1 585 aa12.12□□□□□ -0.47
DDX39A-201ENST00000242776 TMEM38AQ9H6F2 299 aa12.12□□□□□ -0.47
DDX39A-201ENST00000242776 SMAD9O15198 467 aaKnown RBP12.11□□□□□ -0.47
DDX39A-201ENST00000242776 TGFAP01135 160 aa12.11□□□□□ -0.47
DDX39A-201ENST00000242776 C1QCP02747 245 aa12.11□□□□□ -0.47
DDX39A-201ENST00000242776 NGFRP08138 427 aa12.11□□□□□ -0.47
DDX39A-201ENST00000242776 ARAFP10398 606 aa12.11□□□□□ -0.47
DDX39A-201ENST00000242776 NR2F1P10589 423 aa12.11□□□□□ -0.47
DDX39A-201ENST00000242776 ATP6V1C1P21283 382 aa12.11□□□□□ -0.47
DDX39A-201ENST00000242776 ELK4P28324 431 aa12.11□□□□□ -0.47
DDX39A-201ENST00000242776 CCR4P51679 360 aa12.11□□□□□ -0.47
DDX39A-201ENST00000242776 EFNA4P52798 201 aa12.11□□□□□ -0.47
DDX39A-201ENST00000242776 CRISP3P54108 245 aa12.11□□□□□ -0.47
DDX39A-201ENST00000242776 LIPEQ05469 1076 aa12.11□□□□□ -0.47
DDX39A-201ENST00000242776 IQCCQ4KMZ1 466 aa12.11□□□□□ -0.47
DDX39A-201ENST00000242776 GPAT3Q53EU6 434 aa12.11□□□□□ -0.47
DDX39A-201ENST00000242776 DCST2Q5T1A1 773 aa12.11□□□□□ -0.47
DDX39A-201ENST00000242776 KLHL17Q6TDP4 642 aa12.11□□□□□ -0.47
DDX39A-201ENST00000242776 MISPQ8IVT2 679 aa12.11□□□□□ -0.47
DDX39A-201ENST00000242776 DEPDC4Q8N2C3 294 aa12.11□□□□□ -0.47
DDX39A-201ENST00000242776 SLC43A2Q8N370 569 aa12.11□□□□□ -0.47
DDX39A-201ENST00000242776 RAB8BQ92930 207 aa12.11□□□□□ -0.47
DDX39A-201ENST00000242776 FBXO17Q96EF6 278 aa12.11□□□□□ -0.47
DDX39A-201ENST00000242776 THTPAQ9BU02 230 aa12.11□□□□□ -0.47
DDX39A-201ENST00000242776 QRSL1Q9H0R6 528 aaKnown RBP12.11□□□□□ -0.47
DDX39A-201ENST00000242776 MMADHCQ9H3L0 296 aaPredicted RBP12.11□□□□□ -0.47
DDX39A-201ENST00000242776 A4GALTQ9NPC4 353 aa12.11□□□□□ -0.47
DDX39A-201ENST00000242776 POLE3Q9NRF9 147 aa12.11□□□□□ -0.47
DDX39A-201ENST00000242776 ANGPT4Q9Y264 503 aa12.11□□□□□ -0.47
DDX39A-201ENST00000242776 IGHV4-61A0A0C4DH41 118 aa12.1□□□□□ -0.47
DDX39A-201ENST00000242776 ELOVL7A1L3X0 281 aa12.1□□□□□ -0.47
DDX39A-201ENST00000242776 H7C417 338 aa12.1□□□□□ -0.47
DDX39A-201ENST00000242776 GTPBP1O00178 669 aaKnown RBP12.1□□□□□ -0.47
DDX39A-201ENST00000242776 GMNNO75496 209 aa12.1□□□□□ -0.47
DDX39A-201ENST00000242776 STAMBPO95630 424 aa12.1□□□□□ -0.47
DDX39A-201ENST00000242776 BCHEP06276 602 aa12.1□□□□□ -0.47
DDX39A-201ENST00000242776 HSD17B1P14061 328 aa12.1□□□□□ -0.47
DDX39A-201ENST00000242776 PRKCAP17252 672 aa12.1□□□□□ -0.47
DDX39A-201ENST00000242776 ITGA2P17301 1181 aa12.1□□□□□ -0.47
DDX39A-201ENST00000242776 THBS2P35442 1172 aa12.1□□□□□ -0.47
DDX39A-201ENST00000242776 PGM1P36871 562 aa12.1□□□□□ -0.47
DDX39A-201ENST00000242776 GSK3BP49841 420 aa12.1□□□□□ -0.47
DDX39A-201ENST00000242776 PDLIM4P50479 330 aa12.1□□□□□ -0.47
DDX39A-201ENST00000242776 FOXG1P55316 489 aaPredicted RBP12.1□□□□□ -0.47
DDX39A-201ENST00000242776 SCARB2Q14108 478 aa12.1□□□□□ -0.47
DDX39A-201ENST00000242776 CR1LQ2VPA4 569 aa12.1□□□□□ -0.47
DDX39A-201ENST00000242776 ARHGAP11BQ3KRB8 267 aa12.1□□□□□ -0.47
DDX39A-201ENST00000242776 INTS11Q5TA45 600 aaKnown RBP12.1□□□□□ -0.47
DDX39A-201ENST00000242776 PRAMEF8Q5VWM4 474 aa12.1□□□□□ -0.47
DDX39A-201ENST00000242776 PRAMEF7Q5VXH5 474 aa12.1□□□□□ -0.47
DDX39A-201ENST00000242776 C12orf54Q6X4T0 127 aa12.1□□□□□ -0.47
DDX39A-201ENST00000242776 CALHM3Q86XJ0 350 aa12.1□□□□□ -0.47
DDX39A-201ENST00000242776 MICU2Q8IYU8 434 aa12.1□□□□□ -0.47
DDX39A-201ENST00000242776 HIPK4Q8NE63 616 aa12.1□□□□□ -0.47
DDX39A-201ENST00000242776 ZNF583Q96ND8 569 aa12.1□□□□□ -0.47
DDX39A-201ENST00000242776 FOXN4Q96NZ1 517 aa12.1□□□□□ -0.47
DDX39A-201ENST00000242776 TRNT1Q96Q11 434 aaKnown RBP12.1□□□□□ -0.47
DDX39A-201ENST00000242776 PIMREGQ9BSJ6 248 aa12.1□□□□□ -0.47
DDX39A-201ENST00000242776 PIF1Q9H611 641 aa12.1□□□□□ -0.47
DDX39A-201ENST00000242776 BCO1Q9HAY6 547 aa12.1□□□□□ -0.47
DDX39A-201ENST00000242776 CACYBPQ9HB71 228 aaKnown RBP12.1□□□□□ -0.47
DDX39A-201ENST00000242776 GP6Q9HCN6 339 aa12.1□□□□□ -0.47
DDX39A-201ENST00000242776 MGAT4BQ9UQ53 548 aa12.1□□□□□ -0.47
DDX39A-201ENST00000242776 ERICH4A6NGS2 130 aa12.09□□□□□ -0.47
DDX39A-201ENST00000242776 GSTA4O15217 222 aa12.09□□□□□ -0.47
DDX39A-201ENST00000242776 SPRY1O43609 319 aaPredicted RBP12.09□□□□□ -0.47
DDX39A-201ENST00000242776 STX11O75558 287 aa12.09□□□□□ -0.47
DDX39A-201ENST00000242776 CYP7B1O75881 506 aa12.09□□□□□ -0.47
DDX39A-201ENST00000242776 PGM3O95394 542 aa12.09□□□□□ -0.47
DDX39A-201ENST00000242776 H6PDO95479 791 aa12.09□□□□□ -0.47
DDX39A-201ENST00000242776 COX5AP20674 150 aa12.09□□□□□ -0.47
DDX39A-201ENST00000242776 PTAFRP25105 342 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms