RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 OR5K4A6NMS3 321 aa7.19□□□□□ -1.26
CXCR4-201ENST00000241393 C10orf142B7Z368 130 aa7.19□□□□□ -1.26
CXCR4-201ENST00000241393 RAB27BO00194 218 aa7.19□□□□□ -1.26
CXCR4-201ENST00000241393 GABRPO00591 440 aa7.19□□□□□ -1.26
CXCR4-201ENST00000241393 CYR61O00622 381 aa7.19□□□□□ -1.26
CXCR4-201ENST00000241393 BHLHE40O14503 412 aa7.19□□□□□ -1.26
CXCR4-201ENST00000241393 CDC42EP2O14613 210 aa7.19□□□□□ -1.26
CXCR4-201ENST00000241393 P2RX6O15547 441 aa7.19□□□□□ -1.26
CXCR4-201ENST00000241393 COQ9O75208 318 aa7.19□□□□□ -1.26
CXCR4-201ENST00000241393 TRIM3O75382 744 aaPredicted RBP7.19□□□□□ -1.26
CXCR4-201ENST00000241393 NKX2-2O95096 273 aa7.19□□□□□ -1.26
CXCR4-201ENST00000241393 KLF8O95600 359 aaPredicted RBP7.19□□□□□ -1.26
CXCR4-201ENST00000241393 LALBAP00709 142 aa7.19□□□□□ -1.26
CXCR4-201ENST00000241393 ZNF20P17024 532 aa7.19□□□□□ -1.26
CXCR4-201ENST00000241393 F8A1P23610 371 aa7.19□□□□□ -1.26
CXCR4-201ENST00000241393 AKT2P31751 481 aa7.19□□□□□ -1.26
CXCR4-201ENST00000241393 ATP6V1E1P36543 226 aa7.19□□□□□ -1.26
CXCR4-201ENST00000241393 RBM34P42696 430 aaKnown RBP7.19□□□□□ -1.26
CXCR4-201ENST00000241393 TAS2R43P59537 309 aa7.19□□□□□ -1.26
CXCR4-201ENST00000241393 SRP54P61011 504 aaKnown RBP7.19□□□□□ -1.26
CXCR4-201ENST00000241393 SIM1P81133 766 aaPredicted RBP7.19□□□□□ -1.26
CXCR4-201ENST00000241393 SHC2P98077 582 aa7.19□□□□□ -1.26
CXCR4-201ENST00000241393 OR1Q1Q15612 314 aa7.19□□□□□ -1.26
CXCR4-201ENST00000241393 BEAN1Q3B7T3 259 aa7.19□□□□□ -1.26
CXCR4-201ENST00000241393 EOGTQ5NDL2 527 aa7.19□□□□□ -1.26
CXCR4-201ENST00000241393 LCN1P1Q5VSP4 162 aa7.19□□□□□ -1.26
CXCR4-201ENST00000241393 FAM109BQ6ICB4 259 aaPredicted RBP7.19□□□□□ -1.26
CXCR4-201ENST00000241393 LHFPL3Q86UP9 236 aa7.19□□□□□ -1.26
CXCR4-201ENST00000241393 MARCH9Q86YJ5 346 aa7.19□□□□□ -1.26
CXCR4-201ENST00000241393 GRAMD2AQ8IUY3 354 aa7.19□□□□□ -1.26
CXCR4-201ENST00000241393 CPOQ8IVL8 374 aa7.19□□□□□ -1.26
CXCR4-201ENST00000241393 GPALPP1Q8IXQ4 340 aa7.19□□□□□ -1.26
CXCR4-201ENST00000241393 COX18Q8N8Q8 333 aa7.19□□□□□ -1.26
CXCR4-201ENST00000241393 ZNF527Q8NB42 609 aa7.19□□□□□ -1.26
CXCR4-201ENST00000241393 CPEB3Q8NE35 698 aaKnown RBP7.19□□□□□ -1.26
CXCR4-201ENST00000241393 ATP6V1C2Q8NEY4 427 aa7.19□□□□□ -1.26
CXCR4-201ENST00000241393 OR4F15Q8NGB8 312 aa7.19□□□□□ -1.26
CXCR4-201ENST00000241393 NEIL3Q8TAT5 605 aa7.19□□□□□ -1.26
CXCR4-201ENST00000241393 ZCCHC10Q8TBK6 192 aa7.19□□□□□ -1.26
CXCR4-201ENST00000241393 FANK1Q8TC84 345 aa7.19□□□□□ -1.26
CXCR4-201ENST00000241393 SPRYD4Q8WW59 207 aaPredicted RBP7.19□□□□□ -1.26
CXCR4-201ENST00000241393 CTHRC1Q96CG8 243 aa7.19□□□□□ -1.26
CXCR4-201ENST00000241393 MRPL38Q96DV4 380 aaKnown RBP7.19□□□□□ -1.26
CXCR4-201ENST00000241393 FCRL4Q96PJ5 515 aa7.19□□□□□ -1.26
CXCR4-201ENST00000241393 PPP1R3EQ9H7J1 279 aa7.19□□□□□ -1.26
CXCR4-201ENST00000241393 NEK6Q9HC98 313 aa7.19□□□□□ -1.26
CXCR4-201ENST00000241393 TIGARQ9NQ88 270 aa7.19□□□□□ -1.26
CXCR4-201ENST00000241393 CMC2Q9NRP2 79 aa7.19□□□□□ -1.26
CXCR4-201ENST00000241393 BABAM2Q9NXR7 383 aa7.19□□□□□ -1.26
CXCR4-201ENST00000241393 HAO2Q9NYQ3 351 aa7.19□□□□□ -1.26
CXCR4-201ENST00000241393 SLC35A3Q9Y2D2 325 aa7.19□□□□□ -1.26
CXCR4-201ENST00000241393 YARS2Q9Y2Z4 477 aaKnown RBP7.19□□□□□ -1.26
CXCR4-201ENST00000241393 MED31Q9Y3C7 131 aa7.19□□□□□ -1.26
CXCR4-201ENST00000241393 HS3ST3A1Q9Y663 406 aa7.19□□□□□ -1.26
CXCR4-201ENST00000241393 KIR2DS5A0A0G2JLQ3 304 aa7.19□□□□□ -1.26
CXCR4-201ENST00000241393 A0A0G2JNG1 304 aa7.19□□□□□ -1.26
CXCR4-201ENST00000241393 A0A0J9YY10 115 aa7.19□□□□□ -1.26
CXCR4-201ENST00000241393 MEIOCA2RUB1 952 aa7.19□□□□□ -1.26
CXCR4-201ENST00000241393 FAM172BPA6NC97 362 aa7.19□□□□□ -1.26
CXCR4-201ENST00000241393 OR6C74A6NCV1 312 aa7.19□□□□□ -1.26
CXCR4-201ENST00000241393 CCDC182A6NF36 153 aa7.19□□□□□ -1.26
CXCR4-201ENST00000241393 H0YGG7 62 aa7.19□□□□□ -1.26
CXCR4-201ENST00000241393 KIR2DS3K7RE56 304 aa7.19□□□□□ -1.26
CXCR4-201ENST00000241393 SGK494L7N484 410 aa7.19□□□□□ -1.26
CXCR4-201ENST00000241393 GTPBP1O00178 669 aaKnown RBP7.19□□□□□ -1.26
CXCR4-201ENST00000241393 SSX4O60224 188 aa7.19□□□□□ -1.26
CXCR4-201ENST00000241393 PIP5K1CO60331 668 aa7.19□□□□□ -1.26
CXCR4-201ENST00000241393 GALR3O60755 368 aaPredicted RBP7.19□□□□□ -1.26
CXCR4-201ENST00000241393 CH25HO95992 272 aa7.19□□□□□ -1.26
CXCR4-201ENST00000241393 IFI30P13284 250 aa7.19□□□□□ -1.26
CXCR4-201ENST00000241393 CELP19835 753 aa7.19□□□□□ -1.26
CXCR4-201ENST00000241393 BTF3P20290 206 aaKnown RBP7.19□□□□□ -1.26
CXCR4-201ENST00000241393 DRD1P21728 446 aa7.19□□□□□ -1.26
CXCR4-201ENST00000241393 TBXA2RP21731 343 aa7.19□□□□□ -1.26
CXCR4-201ENST00000241393 DRD5P21918 477 aa7.19□□□□□ -1.26
CXCR4-201ENST00000241393 AZGP1P25311 298 aaKnown RBP7.19□□□□□ -1.26
CXCR4-201ENST00000241393 HLA-DMAP28067 261 aa7.19□□□□□ -1.26
CXCR4-201ENST00000241393 HTR2AP28223 471 aa7.19□□□□□ -1.26
CXCR4-201ENST00000241393 HOXD12P35452 270 aa7.19□□□□□ -1.26
CXCR4-201ENST00000241393 EVX1P49640 407 aa7.19□□□□□ -1.26
CXCR4-201ENST00000241393 LBX1P52954 281 aa7.19□□□□□ -1.26
CXCR4-201ENST00000241393 RAB38P57729 211 aa7.19□□□□□ -1.26
CXCR4-201ENST00000241393 CLDN2P57739 230 aa7.19□□□□□ -1.26
CXCR4-201ENST00000241393 ARF3P61204 181 aaPredicted RBP7.19□□□□□ -1.26
CXCR4-201ENST00000241393 UBE2IP63279 158 aaKnown RBP7.19□□□□□ -1.26
CXCR4-201ENST00000241393 HOXC5Q00444 222 aa7.19□□□□□ -1.26
CXCR4-201ENST00000241393 ILF3Q12906 894 aaKnown RBP eCLIP7.19□□□□□ -1.26
CXCR4-201ENST00000241393 GPR18Q14330 331 aa7.19□□□□□ -1.26
CXCR4-201ENST00000241393 KIR2DS5Q14953 304 aa7.19□□□□□ -1.26
CXCR4-201ENST00000241393 GPR68Q15743 365 aa7.19□□□□□ -1.26
CXCR4-201ENST00000241393 ALG11Q2TAA5 492 aa7.19□□□□□ -1.26
CXCR4-201ENST00000241393 PRICKLE4Q2TBC4 344 aa7.19□□□□□ -1.26
CXCR4-201ENST00000241393 AMZ1Q400G9 498 aa7.19□□□□□ -1.26
CXCR4-201ENST00000241393 TRMT12Q53H54 448 aaKnown RBP7.19□□□□□ -1.26
CXCR4-201ENST00000241393 PYDC2Q56P42 97 aa7.19□□□□□ -1.26
CXCR4-201ENST00000241393 MRPL2Q5T653 305 aaKnown RBP7.19□□□□□ -1.26
CXCR4-201ENST00000241393 B3GNTL1Q67FW5 361 aaPredicted RBP7.19□□□□□ -1.26
CXCR4-201ENST00000241393 MZT2BQ6NZ67 158 aa7.19□□□□□ -1.26
CXCR4-201ENST00000241393 MEX3DQ86XN8 651 aaKnown RBP7.19□□□□□ -1.26
CXCR4-201ENST00000241393 SYT14Q8NB59 555 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms