RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 CELA3AP09093 270 aa10.03□□□□□ -0.8
TNFAIP3-201ENST00000237289 ZNF84P51523 738 aa10.03□□□□□ -0.8
TNFAIP3-201ENST00000237289 CRISP1P54107 249 aa10.03□□□□□ -0.8
TNFAIP3-201ENST00000237289 CLDN17P56750 224 aa10.03□□□□□ -0.8
TNFAIP3-201ENST00000237289 B3GNT6Q6ZMB0 384 aa10.03□□□□□ -0.8
TNFAIP3-201ENST00000237289 TRILQ7L0X0 811 aa10.03□□□□□ -0.8
TNFAIP3-201ENST00000237289 MOSPD2Q8NHP6 518 aa10.03□□□□□ -0.8
TNFAIP3-201ENST00000237289 FRMD6Q96NE9 622 aa10.03□□□□□ -0.8
TNFAIP3-201ENST00000237289 RTN4RQ9BZR6 473 aa10.03□□□□□ -0.8
TNFAIP3-201ENST00000237289 PRORYQ9H606 182 aa10.03□□□□□ -0.8
TNFAIP3-201ENST00000237289 A6NIZ1 184 aa10.03□□□□□ -0.8
TNFAIP3-201ENST00000237289 PTGER4P35408 488 aa10.03□□□□□ -0.8
TNFAIP3-201ENST00000237289 ACVR1BP36896 505 aa10.03□□□□□ -0.8
TNFAIP3-201ENST00000237289 MAGEA2P43356 314 aa10.03□□□□□ -0.8
TNFAIP3-201ENST00000237289 RAP1BP61224 184 aa10.03□□□□□ -0.8
TNFAIP3-201ENST00000237289 RAP1AP62834 184 aa10.03□□□□□ -0.8
TNFAIP3-201ENST00000237289 ERVK-25P63136 954 aa10.03□□□□□ -0.8
TNFAIP3-201ENST00000237289 HSF1Q00613 529 aa10.03□□□□□ -0.8
TNFAIP3-201ENST00000237289 IGFL2Q6UWQ7 119 aa10.03□□□□□ -0.8
TNFAIP3-201ENST00000237289 DUS3LQ96G46 650 aaKnown RBP10.03□□□□□ -0.8
TNFAIP3-201ENST00000237289 ARL5BQ96KC2 179 aa10.03□□□□□ -0.8
TNFAIP3-201ENST00000237289 NOX1Q9Y5S8 564 aa10.03□□□□□ -0.8
TNFAIP3-201ENST00000237289 IER3IP1Q9Y5U9 82 aa10.03□□□□□ -0.8
TNFAIP3-201ENST00000237289 MED13Q9UHV7 2174 aa10.02□□□□□ -0.8
TNFAIP3-201ENST00000237289 IGLV3-32A0A0A0MS00 114 aa10.02□□□□□ -0.8
TNFAIP3-201ENST00000237289 ZNF823P16415 610 aa10.02□□□□□ -0.8
TNFAIP3-201ENST00000237289 FPR3P25089 353 aa10.02□□□□□ -0.8
TNFAIP3-201ENST00000237289 ESRRGP62508 458 aa10.02□□□□□ -0.8
TNFAIP3-201ENST00000237289 GXYLT1Q4G148 440 aa10.02□□□□□ -0.8
TNFAIP3-201ENST00000237289 RPUSD3Q6P087 351 aaKnown RBP10.02□□□□□ -0.8
TNFAIP3-201ENST00000237289 C3P1Q6ZMU1 363 aa10.02□□□□□ -0.8
TNFAIP3-201ENST00000237289 ABHD12BQ7Z5M8 362 aaPredicted RBP10.02□□□□□ -0.8
TNFAIP3-201ENST00000237289 TMEM99Q8N816 258 aa10.02□□□□□ -0.8
TNFAIP3-201ENST00000237289 PROKR2Q8NFJ6 384 aa10.02□□□□□ -0.8
TNFAIP3-201ENST00000237289 TAAR8Q969N4 342 aa10.02□□□□□ -0.8
TNFAIP3-201ENST00000237289 SLCO4A1Q96BD0 722 aa10.02□□□□□ -0.8
TNFAIP3-201ENST00000237289 SNRNP40Q96DI7 357 aaKnown RBP10.02□□□□□ -0.8
TNFAIP3-201ENST00000237289 MRPL48Q96GC5 212 aaKnown RBP10.02□□□□□ -0.8
TNFAIP3-201ENST00000237289 TM9SF2Q99805 663 aa10.02□□□□□ -0.8
TNFAIP3-201ENST00000237289 TP63Q9H3D4 680 aaPredicted RBP10.02□□□□□ -0.8
TNFAIP3-201ENST00000237289 TRAPPC4Q9Y296 219 aa10.02□□□□□ -0.8
TNFAIP3-201ENST00000237289 MRPS18CQ9Y3D5 142 aaKnown RBP10.02□□□□□ -0.8
TNFAIP3-201ENST00000237289 MAGED1Q9Y5V3 778 aaPredicted RBP10.02□□□□□ -0.8
TNFAIP3-201ENST00000237289 FER1L5A0AVI2 2057 aa10.02□□□□□ -0.8
TNFAIP3-201ENST00000237289 VPS13AQ96RL7 3174 aa10.02□□□□□ -0.81
TNFAIP3-201ENST00000237289 LRRC3CA6NJW4 275 aa10.02□□□□□ -0.81
TNFAIP3-201ENST00000237289 EEF1E1-BLOC1S5C9J1V9 151 aa10.02□□□□□ -0.81
TNFAIP3-201ENST00000237289 LRRN3E7EW58 273 aa10.02□□□□□ -0.81
TNFAIP3-201ENST00000237289 PRR23D1E9PI22 279 aaPredicted RBP10.02□□□□□ -0.81
TNFAIP3-201ENST00000237289 EEF1E1O43324 174 aaKnown RBP10.02□□□□□ -0.81
TNFAIP3-201ENST00000237289 MPZL2O60487 215 aa10.02□□□□□ -0.81
TNFAIP3-201ENST00000237289 FARS2O95363 451 aaKnown RBP10.02□□□□□ -0.81
TNFAIP3-201ENST00000237289 PPP1R3DO95685 299 aa10.02□□□□□ -0.81
TNFAIP3-201ENST00000237289 PRR23D2P0DMB1 279 aaPredicted RBP10.02□□□□□ -0.81
TNFAIP3-201ENST00000237289 PRKCDQ05655 676 aa10.02□□□□□ -0.81
TNFAIP3-201ENST00000237289 TAF13Q15543 124 aa10.02□□□□□ -0.81
TNFAIP3-201ENST00000237289 NIPAL3Q6P499 406 aa10.02□□□□□ -0.81
TNFAIP3-201ENST00000237289 FAM71CQ8NEG0 241 aa10.02□□□□□ -0.81
TNFAIP3-201ENST00000237289 OR6K6Q8NGW6 343 aa10.02□□□□□ -0.81
TNFAIP3-201ENST00000237289 GPR137Q96N19 417 aa10.02□□□□□ -0.81
TNFAIP3-201ENST00000237289 ADAM19Q9H013 955 aa10.02□□□□□ -0.81
TNFAIP3-201ENST00000237289 RASSF1Q9NS23 344 aa10.02□□□□□ -0.81
TNFAIP3-201ENST00000237289 NKX1-2Q9UD57 310 aaPredicted RBP10.02□□□□□ -0.81
TNFAIP3-201ENST00000237289 OSGIN2Q9Y236 505 aa10.02□□□□□ -0.81
TNFAIP3-201ENST00000237289 SNX5Q9Y5X3 404 aa10.02□□□□□ -0.81
TNFAIP3-201ENST00000237289 CHD8Q9HCK8 2581 aa10.02□□□□□ -0.81
TNFAIP3-201ENST00000237289 OR14I1A6ND48 311 aa10.02□□□□□ -0.81
TNFAIP3-201ENST00000237289 ZIC3O60481 467 aa10.02□□□□□ -0.81
TNFAIP3-201ENST00000237289 PTGDSP41222 190 aa10.02□□□□□ -0.81
TNFAIP3-201ENST00000237289 CSNK1A1P48729 337 aa10.02□□□□□ -0.81
TNFAIP3-201ENST00000237289 CD97P48960 835 aa10.02□□□□□ -0.81
TNFAIP3-201ENST00000237289 GPR139Q6DWJ6 353 aa10.02□□□□□ -0.81
TNFAIP3-201ENST00000237289 PGBD2Q6P3X8 592 aa10.02□□□□□ -0.81
TNFAIP3-201ENST00000237289 ZNF184Q99676 751 aaPredicted RBP10.02□□□□□ -0.81
TNFAIP3-201ENST00000237289 COL6A6A6NMZ7 2263 aa10.02□□□□□ -0.81
TNFAIP3-201ENST00000237289 AHRRA9YTQ3 701 aa10.02□□□□□ -0.81
TNFAIP3-201ENST00000237289 SLC43A1O75387 559 aa10.02□□□□□ -0.81
TNFAIP3-201ENST00000237289 HPRP00739 348 aa10.02□□□□□ -0.81
TNFAIP3-201ENST00000237289 HOXD4P09016 255 aaPredicted RBP10.02□□□□□ -0.81
TNFAIP3-201ENST00000237289 CLDN20P56880 219 aa10.02□□□□□ -0.81
TNFAIP3-201ENST00000237289 TGFBR3Q03167 851 aa10.02□□□□□ -0.81
TNFAIP3-201ENST00000237289 ZNF74Q16587 644 aa10.02□□□□□ -0.81
TNFAIP3-201ENST00000237289 PAQR6Q6TCH4 344 aa10.02□□□□□ -0.81
TNFAIP3-201ENST00000237289 SLC35D2Q76EJ3 337 aa10.02□□□□□ -0.81
TNFAIP3-201ENST00000237289 OR4K13Q8NH42 304 aa10.02□□□□□ -0.81
TNFAIP3-201ENST00000237289 INTS12Q96CB8 462 aaKnown RBP10.02□□□□□ -0.81
TNFAIP3-201ENST00000237289 OXGR1Q96P68 337 aa10.02□□□□□ -0.81
TNFAIP3-201ENST00000237289 PTPRBP23467 1997 aa10.01□□□□□ -0.81
TNFAIP3-201ENST00000237289 ZC3H12DA2A288 527 aaKnown RBP10.01□□□□□ -0.81
TNFAIP3-201ENST00000237289 WDR1O75083 606 aa10.01□□□□□ -0.81
TNFAIP3-201ENST00000237289 IGHG1P01857 330 aa10.01□□□□□ -0.81
TNFAIP3-201ENST00000237289 PDGFAP04085 211 aa10.01□□□□□ -0.81
TNFAIP3-201ENST00000237289 NPRL3Q12980 569 aa10.01□□□□□ -0.81
TNFAIP3-201ENST00000237289 RNPS1Q15287 305 aaKnown RBP10.01□□□□□ -0.81
TNFAIP3-201ENST00000237289 FNDC7Q5VTL7 733 aa10.01□□□□□ -0.81
TNFAIP3-201ENST00000237289 RASSF6Q6ZTQ3 369 aa10.01□□□□□ -0.81
TNFAIP3-201ENST00000237289 ZER1Q7Z7L7 766 aa10.01□□□□□ -0.81
TNFAIP3-201ENST00000237289 OR52E2Q8NGJ4 325 aa10.01□□□□□ -0.81
TNFAIP3-201ENST00000237289 RFKQ969G6 155 aa10.01□□□□□ -0.81
TNFAIP3-201ENST00000237289 IL4I1Q96RQ9 567 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms