RNA–Protein interactions for RNA: ENST00000229328.9

PRKAB1-201, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKAB1, Length 2,610 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-201ENST00000229328 TSSK2Q96PF2 358 aa13.11□□□□□ -0.31
PRKAB1-201ENST00000229328 SEMA4CQ9C0C4 833 aa13.11□□□□□ -0.31
PRKAB1-201ENST00000229328 ISPDA4D126 451 aa13.11□□□□□ -0.31
PRKAB1-201ENST00000229328 SELENOFO60613 162 aa13.11□□□□□ -0.31
PRKAB1-201ENST00000229328 UQCRC1P31930 480 aa13.11□□□□□ -0.31
PRKAB1-201ENST00000229328 CTXN1P60606 82 aa13.11□□□□□ -0.31
PRKAB1-201ENST00000229328 SLC3A1Q07837 685 aa13.11□□□□□ -0.31
PRKAB1-201ENST00000229328 POU4F2Q12837 409 aa13.11□□□□□ -0.31
PRKAB1-201ENST00000229328 GPR50Q13585 617 aa13.11□□□□□ -0.31
PRKAB1-201ENST00000229328 ZNF79Q15937 498 aa13.11□□□□□ -0.31
PRKAB1-201ENST00000229328 TP53I3Q53FA7 332 aa13.11□□□□□ -0.31
PRKAB1-201ENST00000229328 LEG1Q6P5S2 330 aa13.11□□□□□ -0.31
PRKAB1-201ENST00000229328 OVCH1Q7RTY7 1134 aa13.11□□□□□ -0.31
PRKAB1-201ENST00000229328 C1orf210Q8IVY1 113 aa13.11□□□□□ -0.31
PRKAB1-201ENST00000229328 WDFY2Q96P53 400 aa13.11□□□□□ -0.31
PRKAB1-201ENST00000229328 CNN2Q99439 309 aaKnown RBP13.11□□□□□ -0.31
PRKAB1-201ENST00000229328 COQ7Q99807 217 aa13.11□□□□□ -0.31
PRKAB1-201ENST00000229328 WDR77Q9BQA1 342 aaPredicted RBP13.11□□□□□ -0.31
PRKAB1-201ENST00000229328 SLC35F4A4IF30 521 aa13.1□□□□□ -0.31
PRKAB1-201ENST00000229328 C2orf72A6NCS6 295 aa13.1□□□□□ -0.31
PRKAB1-201ENST00000229328 BOLA2-SMG1P6H3BVE0 249 aa13.1□□□□□ -0.31
PRKAB1-201ENST00000229328 EIF4E2O60573 245 aaKnown RBP13.1□□□□□ -0.31
PRKAB1-201ENST00000229328 RGS9O75916 674 aaPredicted RBP13.1□□□□□ -0.31
PRKAB1-201ENST00000229328 SNX4O95219 450 aa13.1□□□□□ -0.31
PRKAB1-201ENST00000229328 ACVR1BP36896 505 aa13.1□□□□□ -0.31
PRKAB1-201ENST00000229328 DIO1P49895 249 aa13.1□□□□□ -0.31
PRKAB1-201ENST00000229328 RPL18Q07020 188 aaKnown RBP13.1□□□□□ -0.31
PRKAB1-201ENST00000229328 GGTLC2Q14390 218 aa13.1□□□□□ -0.31
PRKAB1-201ENST00000229328 PON3Q15166 354 aa13.1□□□□□ -0.31
PRKAB1-201ENST00000229328 FAM27D1Q5T7N8 215 aa13.1□□□□□ -0.31
PRKAB1-201ENST00000229328 PEAR1Q5VY43 1037 aaPredicted RBP13.1□□□□□ -0.31
PRKAB1-201ENST00000229328 OR5M10Q6IEU7 315 aa13.1□□□□□ -0.31
PRKAB1-201ENST00000229328 MINDY2Q8NBR6 621 aa13.1□□□□□ -0.31
PRKAB1-201ENST00000229328 OR6K6Q8NGW6 343 aa13.1□□□□□ -0.31
PRKAB1-201ENST00000229328 DUSP19Q8WTR2 217 aa13.1□□□□□ -0.31
PRKAB1-201ENST00000229328 HTRA1Q92743 480 aa13.1□□□□□ -0.31
PRKAB1-201ENST00000229328 NAT6Q93015 286 aa13.1□□□□□ -0.31
PRKAB1-201ENST00000229328 TP53INP1Q96A56 240 aa13.1□□□□□ -0.31
PRKAB1-201ENST00000229328 C8orf44Q96CB5 159 aa13.1□□□□□ -0.31
PRKAB1-201ENST00000229328 COPS3Q9UNS2 423 aa13.1□□□□□ -0.31
PRKAB1-201ENST00000229328 NPFFR2Q9Y5X5 522 aa13.1□□□□□ -0.31
PRKAB1-201ENST00000229328 TECTAO75443 2155 aa13.1□□□□□ -0.31
PRKAB1-201ENST00000229328 B4DXG7 233 aa13.1□□□□□ -0.31
PRKAB1-201ENST00000229328 CD14P08571 375 aa13.1□□□□□ -0.31
PRKAB1-201ENST00000229328 SPNP16150 400 aa13.1□□□□□ -0.31
PRKAB1-201ENST00000229328 CXCR1P25024 350 aa13.1□□□□□ -0.31
PRKAB1-201ENST00000229328 PYCR1P32322 319 aa13.1□□□□□ -0.31
PRKAB1-201ENST00000229328 EMP2P54851 167 aa13.1□□□□□ -0.31
PRKAB1-201ENST00000229328 FBXW4P57775 412 aa13.1□□□□□ -0.31
PRKAB1-201ENST00000229328 ACTC1P68032 377 aa13.1□□□□□ -0.31
PRKAB1-201ENST00000229328 ACTA1P68133 377 aa13.1□□□□□ -0.31
PRKAB1-201ENST00000229328 MADCAM1Q13477 382 aa13.1□□□□□ -0.31
PRKAB1-201ENST00000229328 ISXQ2M1V0 245 aa13.1□□□□□ -0.31
PRKAB1-201ENST00000229328 PPP1R3BQ86XI6 285 aa13.1□□□□□ -0.31
PRKAB1-201ENST00000229328 SLC35F2Q8IXU6 374 aa13.1□□□□□ -0.31
PRKAB1-201ENST00000229328 LSM14AQ8ND56 463 aaKnown RBP13.1□□□□□ -0.31
PRKAB1-201ENST00000229328 C12orf10Q9HB07 376 aa13.1□□□□□ -0.31
PRKAB1-201ENST00000229328 RPRD1BQ9NQG5 326 aaKnown RBP13.1□□□□□ -0.31
PRKAB1-201ENST00000229328 ZNF229Q9UJW7 825 aa13.1□□□□□ -0.31
PRKAB1-201ENST00000229328 OR6C70A6NIJ9 312 aa13.09□□□□□ -0.31
PRKAB1-201ENST00000229328 TMEM200CA6NKL6 621 aa13.09□□□□□ -0.31
PRKAB1-201ENST00000229328 PLPP2O43688 288 aa13.09□□□□□ -0.31
PRKAB1-201ENST00000229328 IDH3BO43837 385 aa13.09□□□□□ -0.31
PRKAB1-201ENST00000229328 PGCP20142 388 aa13.09□□□□□ -0.31
PRKAB1-201ENST00000229328 AZGP1P25311 298 aaKnown RBP13.09□□□□□ -0.31
PRKAB1-201ENST00000229328 QPRTQ15274 297 aa13.09□□□□□ -0.31
PRKAB1-201ENST00000229328 PAPD4Q6PIY7 484 aaKnown RBP13.09□□□□□ -0.31
PRKAB1-201ENST00000229328 NR2C2APQ86WQ0 139 aa13.09□□□□□ -0.31
PRKAB1-201ENST00000229328 PGLYRP3Q96LB9 341 aa13.09□□□□□ -0.31
PRKAB1-201ENST00000229328 NECAB3Q96P71 396 aaPredicted RBP13.09□□□□□ -0.31
PRKAB1-201ENST00000229328 SPSB2Q99619 263 aa13.09□□□□□ -0.31
PRKAB1-201ENST00000229328 RNF32Q9H0A6 362 aa13.09□□□□□ -0.31
PRKAB1-201ENST00000229328 POLHQ9Y253 713 aa13.09□□□□□ -0.31
PRKAB1-201ENST00000229328 HTR3EA5X5Y0 456 aa13.09□□□□□ -0.31
PRKAB1-201ENST00000229328 VSTM2BA6NLU5 285 aa13.09□□□□□ -0.31
PRKAB1-201ENST00000229328 H7C1C5 153 aa13.09□□□□□ -0.31
PRKAB1-201ENST00000229328 CDC40O60508 579 aaKnown RBP eCLIP13.09□□□□□ -0.31
PRKAB1-201ENST00000229328 OR2T7P0C7T2 308 aa13.09□□□□□ -0.31
PRKAB1-201ENST00000229328 GP1BBP13224 206 aa13.09□□□□□ -0.31
PRKAB1-201ENST00000229328 P2RX1P51575 399 aa13.09□□□□□ -0.31
PRKAB1-201ENST00000229328 LCN6P62502 163 aa13.09□□□□□ -0.31
PRKAB1-201ENST00000229328 DAB2P98082 770 aa13.09□□□□□ -0.31
PRKAB1-201ENST00000229328 SIGLEC14Q08ET2 396 aa13.09□□□□□ -0.31
PRKAB1-201ENST00000229328 CBFBQ13951 182 aa13.09□□□□□ -0.31
PRKAB1-201ENST00000229328 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.09□□□□□ -0.31
PRKAB1-201ENST00000229328 LINC01590Q5TEZ4 76 aa13.09□□□□□ -0.31
PRKAB1-201ENST00000229328 NANOGNBQ7Z5D8 188 aa13.09□□□□□ -0.31
PRKAB1-201ENST00000229328 GPALPP1Q8IXQ4 340 aa13.09□□□□□ -0.31
PRKAB1-201ENST00000229328 POMGNT2Q8NAT1 580 aa13.09□□□□□ -0.31
PRKAB1-201ENST00000229328 OR2T27Q8NH04 317 aa13.09□□□□□ -0.31
PRKAB1-201ENST00000229328 GPR119Q8TDV5 335 aa13.09□□□□□ -0.31
PRKAB1-201ENST00000229328 NPAS1Q99742 590 aa13.09□□□□□ -0.31
PRKAB1-201ENST00000229328 ATF6BQ99941 703 aa13.09□□□□□ -0.31
PRKAB1-201ENST00000229328 SMOC1Q9H4F8 434 aa13.09□□□□□ -0.31
PRKAB1-201ENST00000229328 COMMD3Q9UBI1 195 aa13.09□□□□□ -0.31
PRKAB1-201ENST00000229328 ST6GALNAC2Q9UJ37 374 aa13.09□□□□□ -0.31
PRKAB1-201ENST00000229328 TRAPPC4Q9Y296 219 aa13.09□□□□□ -0.31
PRKAB1-201ENST00000229328 NOX1Q9Y5S8 564 aa13.09□□□□□ -0.31
PRKAB1-201ENST00000229328 DCTN6O00399 190 aa13.09□□□□□ -0.31
PRKAB1-201ENST00000229328 BGLAPP02818 100 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms