RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 MAGEA2P43356 314 aa12.69□□□□□ -0.38
SIX4-201ENST00000216513 ZNF773Q6PK81 442 aa12.69□□□□□ -0.38
SIX4-201ENST00000216513 LYSMD1Q96S90 227 aa12.69□□□□□ -0.38
SIX4-201ENST00000216513 EMCNQ9ULC0 261 aa12.69□□□□□ -0.38
SIX4-201ENST00000216513 C8BP07358 591 aa12.69□□□□□ -0.38
SIX4-201ENST00000216513 HTR1EP28566 365 aa12.69□□□□□ -0.38
SIX4-201ENST00000216513 PSPHP78330 225 aa12.69□□□□□ -0.38
SIX4-201ENST00000216513 TBRG1Q3YBR2 411 aa12.69□□□□□ -0.38
SIX4-201ENST00000216513 ZNF404Q494X3 552 aa12.69□□□□□ -0.38
SIX4-201ENST00000216513 KIF18BQ86Y91 864 aa12.69□□□□□ -0.38
SIX4-201ENST00000216513 CPEB3Q8NE35 698 aaKnown RBP12.69□□□□□ -0.38
SIX4-201ENST00000216513 OR5AK2Q8NH90 309 aa12.69□□□□□ -0.38
SIX4-201ENST00000216513 ABHD4Q8TB40 342 aa12.69□□□□□ -0.38
SIX4-201ENST00000216513 IL1F10Q8WWZ1 152 aa12.69□□□□□ -0.38
SIX4-201ENST00000216513 PKMYT1Q99640 499 aa12.69□□□□□ -0.38
SIX4-201ENST00000216513 PAK1IP1Q9NWT1 392 aaPredicted RBP12.69□□□□□ -0.38
SIX4-201ENST00000216513 VAPAQ9P0L0 249 aa12.69□□□□□ -0.38
SIX4-201ENST00000216513 CDH10Q9Y6N8 788 aa12.69□□□□□ -0.38
SIX4-201ENST00000216513 CR2P20023 1033 aa12.68□□□□□ -0.38
SIX4-201ENST00000216513 STARD6P59095 220 aa12.68□□□□□ -0.38
SIX4-201ENST00000216513 FXYD4P59646 89 aa12.68□□□□□ -0.38
SIX4-201ENST00000216513 RPS23P62266 143 aaKnown RBP12.68□□□□□ -0.38
SIX4-201ENST00000216513 DCDC5Q6ZRR9 648 aa12.68□□□□□ -0.38
SIX4-201ENST00000216513 GCNT2Q8N0V5 402 aa12.68□□□□□ -0.38
SIX4-201ENST00000216513 TRAPPC2LH3BP13 241 aa12.68□□□□□ -0.38
SIX4-201ENST00000216513 TAPBPO15533 448 aa12.68□□□□□ -0.38
SIX4-201ENST00000216513 DIRAS3O95661 229 aa12.68□□□□□ -0.38
SIX4-201ENST00000216513 CRYBA1P05813 215 aa12.68□□□□□ -0.38
SIX4-201ENST00000216513 EVI2BP34910 448 aa12.68□□□□□ -0.38
SIX4-201ENST00000216513 DRD3P35462 400 aa12.68□□□□□ -0.38
SIX4-201ENST00000216513 DTWD1Q8N5C7 304 aa12.68□□□□□ -0.38
SIX4-201ENST00000216513 KISS1RQ969F8 398 aaPredicted RBP12.68□□□□□ -0.38
SIX4-201ENST00000216513 ELOVL3Q9HB03 270 aa12.68□□□□□ -0.38
SIX4-201ENST00000216513 MLXQ9UH92 298 aa12.68□□□□□ -0.38
SIX4-201ENST00000216513 ALG5Q9Y673 324 aa12.68□□□□□ -0.38
SIX4-201ENST00000216513 PLPP1O14494 284 aa12.68□□□□□ -0.38
SIX4-201ENST00000216513 HOXC8P31273 242 aa12.68□□□□□ -0.38
SIX4-201ENST00000216513 ETV5P41161 510 aa12.68□□□□□ -0.38
SIX4-201ENST00000216513 CNN3Q15417 329 aaKnown RBP12.68□□□□□ -0.38
SIX4-201ENST00000216513 FBXL14Q8N1E6 418 aa12.68□□□□□ -0.38
SIX4-201ENST00000216513 CD300LFQ8TDQ1 290 aa12.68□□□□□ -0.38
SIX4-201ENST00000216513 SLC41A2Q96JW4 573 aa12.68□□□□□ -0.38
SIX4-201ENST00000216513 MMP28Q9H239 520 aa12.68□□□□□ -0.38
SIX4-201ENST00000216513 NUDT15Q9NV35 164 aa12.68□□□□□ -0.38
SIX4-201ENST00000216513 ATG2BQ96BY7 2078 aa12.68□□□□□ -0.38
SIX4-201ENST00000216513 TOR1AO14656 332 aa12.68□□□□□ -0.38
SIX4-201ENST00000216513 GABBR2O75899 941 aa12.68□□□□□ -0.38
SIX4-201ENST00000216513 GCAP28676 217 aa12.68□□□□□ -0.38
SIX4-201ENST00000216513 POU4F3Q15319 338 aa12.68□□□□□ -0.38
SIX4-201ENST00000216513 CCDC107Q8WV48 283 aa12.68□□□□□ -0.38
SIX4-201ENST00000216513 SEMA4CQ9C0C4 833 aa12.68□□□□□ -0.38
SIX4-201ENST00000216513 NMNAT1Q9HAN9 279 aaPredicted RBP12.68□□□□□ -0.38
SIX4-201ENST00000216513 TRIP12Q14669 1992 aaPredicted RBP12.68□□□□□ -0.38
SIX4-201ENST00000216513 MYO5AQ9Y4I1 1855 aaKnown RBP12.68□□□□□ -0.38
SIX4-201ENST00000216513 TRAV36DV7A0A075B6V5 113 aa12.67□□□□□ -0.38
SIX4-201ENST00000216513 ANKRD34BA5PLL1 514 aa12.67□□□□□ -0.38
SIX4-201ENST00000216513 EPHA1P21709 976 aa12.67□□□□□ -0.38
SIX4-201ENST00000216513 PCGF2P35227 344 aa12.67□□□□□ -0.38
SIX4-201ENST00000216513 SOX8P57073 446 aa12.67□□□□□ -0.38
SIX4-201ENST00000216513 TINAGL1Q9GZM7 467 aaPredicted RBP12.67□□□□□ -0.38
SIX4-201ENST00000216513 PPP1R14DQ9NXH3 145 aa12.67□□□□□ -0.38
SIX4-201ENST00000216513 TAS2R16Q9NYV7 291 aa12.67□□□□□ -0.38
SIX4-201ENST00000216513 OSGIN2Q9Y236 505 aa12.67□□□□□ -0.38
SIX4-201ENST00000216513 SELENOWP63302 87 aa12.67□□□□□ -0.38
SIX4-201ENST00000216513 MKXQ8IYA7 352 aa12.67□□□□□ -0.38
SIX4-201ENST00000216513 SUCNR1Q9BXA5 334 aa12.67□□□□□ -0.38
SIX4-201ENST00000216513 DPAGT1Q9H3H5 408 aa12.67□□□□□ -0.38
SIX4-201ENST00000216513 AK6Q9Y3D8 172 aaKnown RBP12.67□□□□□ -0.38
SIX4-201ENST00000216513 SIPA1L3O60292 1781 aaPredicted RBP12.67□□□□□ -0.38
SIX4-201ENST00000216513 A0A1B0GVG6 124 aa12.67□□□□□ -0.38
SIX4-201ENST00000216513 KIR2DL1P43626 348 aaPredicted RBP12.67□□□□□ -0.38
SIX4-201ENST00000216513 EDDM3BP56851 147 aa12.67□□□□□ -0.38
SIX4-201ENST00000216513 SMN1Q16637 294 aaKnown RBP12.67□□□□□ -0.38
SIX4-201ENST00000216513 C6orf141Q5SZD1 244 aa12.67□□□□□ -0.38
SIX4-201ENST00000216513 SBSNQ6UWP8 590 aa12.67□□□□□ -0.38
SIX4-201ENST00000216513 CPOQ8IVL8 374 aa12.67□□□□□ -0.38
SIX4-201ENST00000216513 ROBO4Q8WZ75 1007 aa12.67□□□□□ -0.38
SIX4-201ENST00000216513 TESQ9UGI8 421 aaKnown RBP12.67□□□□□ -0.38
SIX4-201ENST00000216513 ICOSLGO75144 302 aa12.67□□□□□ -0.38
SIX4-201ENST00000216513 FGF4P08620 206 aa12.67□□□□□ -0.38
SIX4-201ENST00000216513 P2RX1P51575 399 aa12.67□□□□□ -0.38
SIX4-201ENST00000216513 RNF4P78317 190 aa12.67□□□□□ -0.38
SIX4-201ENST00000216513 FAM173AQ9BQD7 235 aa12.67□□□□□ -0.38
SIX4-201ENST00000216513 ABCD2Q9UBJ2 740 aa12.67□□□□□ -0.38
SIX4-201ENST00000216513 A0A087WUU8 490 aa12.67□□□□□ -0.38
SIX4-201ENST00000216513 I3L521 148 aa12.67□□□□□ -0.38
SIX4-201ENST00000216513 ZNF81P51508 661 aa12.67□□□□□ -0.38
SIX4-201ENST00000216513 TMEM69Q5SWH9 247 aa12.67□□□□□ -0.38
SIX4-201ENST00000216513 GLB1L2Q8IW92 636 aa12.67□□□□□ -0.38
SIX4-201ENST00000216513 PHC2Q8IXK0 858 aa12.67□□□□□ -0.38
SIX4-201ENST00000216513 S1PR5Q9H228 398 aa12.67□□□□□ -0.38
SIX4-201ENST00000216513 UBTD1Q9HAC8 227 aa12.67□□□□□ -0.38
SIX4-201ENST00000216513 FAM96BQ9Y3D0 163 aa12.67□□□□□ -0.38
SIX4-201ENST00000216513 NDUFB7P17568 137 aa12.66□□□□□ -0.38
SIX4-201ENST00000216513 KIAA1958Q8N8K9 716 aa12.66□□□□□ -0.38
SIX4-201ENST00000216513 THAP6Q8TBB0 222 aa12.66□□□□□ -0.38
SIX4-201ENST00000216513 ITFG2Q969R8 447 aa12.66□□□□□ -0.38
SIX4-201ENST00000216513 FUNDC2Q9BWH2 189 aa12.66□□□□□ -0.38
SIX4-201ENST00000216513 LAMB2P55268 1798 aa12.66□□□□□ -0.38
SIX4-201ENST00000216513 OLFM2O95897 454 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms