RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 SPI1P17947 270 aa12.98□□□□□ -0.33
RTFDC1-201ENST00000023939 MAP2K6P52564 334 aa12.98□□□□□ -0.33
RTFDC1-201ENST00000023939 SLC16A1P53985 500 aa12.98□□□□□ -0.33
RTFDC1-201ENST00000023939 TAS2R43P59537 309 aa12.98□□□□□ -0.33
RTFDC1-201ENST00000023939 CTXN1P60606 82 aa12.98□□□□□ -0.33
RTFDC1-201ENST00000023939 E2F1Q01094 437 aa12.98□□□□□ -0.33
RTFDC1-201ENST00000023939 ZNF85Q03923 595 aa12.98□□□□□ -0.33
RTFDC1-201ENST00000023939 SGCBQ16585 318 aa12.98□□□□□ -0.33
RTFDC1-201ENST00000023939 GXYLT1Q4G148 440 aa12.98□□□□□ -0.33
RTFDC1-201ENST00000023939 DCAF12Q5T6F0 453 aa12.98□□□□□ -0.33
RTFDC1-201ENST00000023939 ARIH2OSQ8N7S6 290 aa12.98□□□□□ -0.33
RTFDC1-201ENST00000023939 EXD3Q8N9H8 876 aa12.98□□□□□ -0.33
RTFDC1-201ENST00000023939 OR2T27Q8NH04 317 aa12.98□□□□□ -0.33
RTFDC1-201ENST00000023939 M1APQ8TC57 530 aa12.98□□□□□ -0.33
RTFDC1-201ENST00000023939 NMNAT3Q96T66 252 aa12.98□□□□□ -0.33
RTFDC1-201ENST00000023939 CNN2Q99439 309 aaKnown RBP12.98□□□□□ -0.33
RTFDC1-201ENST00000023939 STRADBQ9C0K7 418 aa12.98□□□□□ -0.33
RTFDC1-201ENST00000023939 KLHL1Q9NR64 748 aa12.98□□□□□ -0.33
RTFDC1-201ENST00000023939 SDHAF3Q9NRP4 125 aa12.98□□□□□ -0.33
RTFDC1-201ENST00000023939 MOKQ9UQ07 419 aa12.98□□□□□ -0.33
RTFDC1-201ENST00000023939 PCDHGB7Q9Y5F8 929 aa12.98□□□□□ -0.33
RTFDC1-201ENST00000023939 TEX13CA0A0J9YWL9 993 aa12.97□□□□□ -0.33
RTFDC1-201ENST00000023939 J3QRK9 145 aa12.97□□□□□ -0.33
RTFDC1-201ENST00000023939 TAF4O00268 1085 aa12.97□□□□□ -0.33
RTFDC1-201ENST00000023939 CDX4O14627 284 aaPredicted RBP12.97□□□□□ -0.33
RTFDC1-201ENST00000023939 OR2T1O43869 369 aa12.97□□□□□ -0.33
RTFDC1-201ENST00000023939 CBFA2T3O75081 653 aa12.97□□□□□ -0.33
RTFDC1-201ENST00000023939 OR2J2O76002 312 aa12.97□□□□□ -0.33
RTFDC1-201ENST00000023939 HLA-DPB1P04440 258 aa12.97□□□□□ -0.33
RTFDC1-201ENST00000023939 ZNF12P17014 697 aa12.97□□□□□ -0.33
RTFDC1-201ENST00000023939 RPS19P39019 145 aaKnown RBP12.97□□□□□ -0.33
RTFDC1-201ENST00000023939 PTGDSP41222 190 aa12.97□□□□□ -0.33
RTFDC1-201ENST00000023939 APOBEC1P41238 236 aaKnown RBP12.97□□□□□ -0.33
RTFDC1-201ENST00000023939 RPS5P46782 204 aaKnown RBP12.97□□□□□ -0.33
RTFDC1-201ENST00000023939 SLC25A53Q5H9E4 307 aa12.97□□□□□ -0.33
RTFDC1-201ENST00000023939 C1orf140Q5VVS0 124 aa12.97□□□□□ -0.33
RTFDC1-201ENST00000023939 TMEM81Q6P7N7 255 aa12.97□□□□□ -0.33
RTFDC1-201ENST00000023939 C16orf87Q6PH81 154 aa12.97□□□□□ -0.33
RTFDC1-201ENST00000023939 KLBQ86Z14 1044 aa12.97□□□□□ -0.33
RTFDC1-201ENST00000023939 EGFL6Q8IUX8 553 aa12.97□□□□□ -0.33
RTFDC1-201ENST00000023939 SYS1Q8N2H4 156 aa12.97□□□□□ -0.33
RTFDC1-201ENST00000023939 GALNT6Q8NCL4 622 aa12.97□□□□□ -0.33
RTFDC1-201ENST00000023939 ATP6V1C2Q8NEY4 427 aa12.97□□□□□ -0.33
RTFDC1-201ENST00000023939 FNDC8Q8TC99 324 aa12.97□□□□□ -0.33
RTFDC1-201ENST00000023939 RASD2Q96D21 266 aa12.97□□□□□ -0.33
RTFDC1-201ENST00000023939 SPACA9Q96E40 222 aaPredicted RBP12.97□□□□□ -0.33
RTFDC1-201ENST00000023939 C1GALT1C1Q96EU7 318 aa12.97□□□□□ -0.33
RTFDC1-201ENST00000023939 Q96M85 177 aa12.97□□□□□ -0.33
RTFDC1-201ENST00000023939 KCTD7Q96MP8 289 aa12.97□□□□□ -0.33
RTFDC1-201ENST00000023939 SNX18Q96RF0 628 aa12.97□□□□□ -0.33
RTFDC1-201ENST00000023939 RASL10BQ96S79 203 aa12.97□□□□□ -0.33
RTFDC1-201ENST00000023939 DDA1Q9BW61 102 aa12.97□□□□□ -0.33
RTFDC1-201ENST00000023939 COL25A1Q9BXS0 654 aaPredicted RBP12.97□□□□□ -0.33
RTFDC1-201ENST00000023939 ISG20L2Q9H9L3 353 aaKnown RBP12.97□□□□□ -0.33
RTFDC1-201ENST00000023939 CPNE5Q9HCH3 593 aa12.97□□□□□ -0.33
RTFDC1-201ENST00000023939 TRIM36Q9NQ86 728 aa12.97□□□□□ -0.33
RTFDC1-201ENST00000023939 GSTK1Q9Y2Q3 226 aa12.97□□□□□ -0.33
RTFDC1-201ENST00000023939 LOXL2Q9Y4K0 774 aa12.97□□□□□ -0.33
RTFDC1-201ENST00000023939 HS3ST3B1Q9Y662 390 aa12.97□□□□□ -0.33
RTFDC1-201ENST00000023939 A0A1B0GVG6 124 aa12.96□□□□□ -0.33
RTFDC1-201ENST00000023939 A0A1W2PQL4 384 aaPredicted RBP12.96□□□□□ -0.33
RTFDC1-201ENST00000023939 DXOO77932 396 aaKnown RBP12.96□□□□□ -0.33
RTFDC1-201ENST00000023939 GLCEO94923 617 aa12.96□□□□□ -0.33
RTFDC1-201ENST00000023939 GYPBP06028 91 aa12.96□□□□□ -0.33
RTFDC1-201ENST00000023939 CD40LGP29965 261 aa12.96□□□□□ -0.33
RTFDC1-201ENST00000023939 ETV6P41212 452 aa12.96□□□□□ -0.33
RTFDC1-201ENST00000023939 CDKN2AP42771 156 aaKnown RBP12.96□□□□□ -0.33
RTFDC1-201ENST00000023939 RORCP51449 518 aa12.96□□□□□ -0.33
RTFDC1-201ENST00000023939 FABP5Q01469 135 aa12.96□□□□□ -0.33
RTFDC1-201ENST00000023939 HSF2Q03933 536 aa12.96□□□□□ -0.33
RTFDC1-201ENST00000023939 INAQ16352 499 aa12.96□□□□□ -0.33
RTFDC1-201ENST00000023939 BTBD16Q32M84 506 aa12.96□□□□□ -0.33
RTFDC1-201ENST00000023939 CRTC2Q53ET0 693 aaPredicted RBP12.96□□□□□ -0.33
RTFDC1-201ENST00000023939 LINC01590Q5TEZ4 76 aa12.96□□□□□ -0.33
RTFDC1-201ENST00000023939 C1QL3Q5VWW1 255 aa12.96□□□□□ -0.33
RTFDC1-201ENST00000023939 CDCP2Q5VXM1 449 aa12.96□□□□□ -0.33
RTFDC1-201ENST00000023939 VASNQ6EMK4 673 aa12.96□□□□□ -0.33
RTFDC1-201ENST00000023939 JAZF1Q86VZ6 243 aa12.96□□□□□ -0.33
RTFDC1-201ENST00000023939 ARMC10Q8N2F6 343 aa12.96□□□□□ -0.33
RTFDC1-201ENST00000023939 LSM14AQ8ND56 463 aaKnown RBP12.96□□□□□ -0.33
RTFDC1-201ENST00000023939 OR5J2Q8NH18 312 aa12.96□□□□□ -0.33
RTFDC1-201ENST00000023939 TAS2R5Q9NYW4 299 aa12.96□□□□□ -0.33
RTFDC1-201ENST00000023939 CRNNQ9UBG3 495 aaPredicted RBP12.96□□□□□ -0.33
RTFDC1-201ENST00000023939 POLHQ9Y253 713 aa12.96□□□□□ -0.33
RTFDC1-201ENST00000023939 B4DXG7 233 aa12.96□□□□□ -0.34
RTFDC1-201ENST00000023939 ZNF208O43345 1280 aa12.96□□□□□ -0.34
RTFDC1-201ENST00000023939 GMFGO60234 142 aa12.96□□□□□ -0.34
RTFDC1-201ENST00000023939 FZD7O75084 574 aa12.96□□□□□ -0.34
RTFDC1-201ENST00000023939 WISP1O95388 367 aa12.96□□□□□ -0.34
RTFDC1-201ENST00000023939 AHSA1O95433 338 aa12.96□□□□□ -0.34
RTFDC1-201ENST00000023939 TFP02787 698 aa12.96□□□□□ -0.34
RTFDC1-201ENST00000023939 RAB40ALP0C0E4 278 aa12.96□□□□□ -0.34
RTFDC1-201ENST00000023939 ZNF806P0C7X5 589 aa12.96□□□□□ -0.34
RTFDC1-201ENST00000023939 CELP19835 753 aa12.96□□□□□ -0.34
RTFDC1-201ENST00000023939 S100A5P33763 92 aa12.96□□□□□ -0.34
RTFDC1-201ENST00000023939 FOLR3P41439 243 aa12.96□□□□□ -0.34
RTFDC1-201ENST00000023939 SNTA1Q13424 505 aa12.96□□□□□ -0.34
RTFDC1-201ENST00000023939 MFSD13AQ14CX5 517 aa12.96□□□□□ -0.34
RTFDC1-201ENST00000023939 TRAM1Q15629 374 aa12.96□□□□□ -0.34
RTFDC1-201ENST00000023939 TBC1D25Q3MII6 688 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms