RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 Cpeb4Q7TN98 729 aaKnown RBP14.58□□□□□ -0.08
Trim39-203ENSMUST00000113706 Exosc3Q7TQK4 274 aa14.58□□□□□ -0.08
Trim39-203ENSMUST00000113706 Plekhm3Q8BM47 761 aa14.58□□□□□ -0.08
Trim39-203ENSMUST00000113706 Acaa2Q8BWT1 397 aa14.58□□□□□ -0.08
Trim39-203ENSMUST00000113706 Slc43a2Q8CGA3 568 aa14.58□□□□□ -0.08
Trim39-203ENSMUST00000113706 Erlec1Q8VEH8 483 aa14.58□□□□□ -0.08
Trim39-203ENSMUST00000113706 Olfr531Q8VGL2 304 aa14.58□□□□□ -0.08
Trim39-203ENSMUST00000113706 Cers4Q9D6J1 393 aa14.58□□□□□ -0.08
Trim39-203ENSMUST00000113706 Olfr723E9PZU2 309 aa14.58□□□□□ -0.08
Trim39-203ENSMUST00000113706 Gm21319F6YNI8 144 aa14.58□□□□□ -0.08
Trim39-203ENSMUST00000113706 3110082J24RikF6Z6Z2 108 aa14.58□□□□□ -0.08
Trim39-203ENSMUST00000113706 Olfr724K7N5X7 309 aa14.58□□□□□ -0.08
Trim39-203ENSMUST00000113706 Gstm5P48774 224 aa14.58□□□□□ -0.08
Trim39-203ENSMUST00000113706 Slc1a3P56564 543 aa14.58□□□□□ -0.08
Trim39-203ENSMUST00000113706 Pak6Q3ULB5 682 aa14.58□□□□□ -0.08
Trim39-203ENSMUST00000113706 Eml4Q3UMY5 988 aa14.58□□□□□ -0.08
Trim39-203ENSMUST00000113706 Gm10750Q3V0I0 133 aa14.58□□□□□ -0.08
Trim39-203ENSMUST00000113706 Slc16a11Q5NC32 447 aa14.58□□□□□ -0.08
Trim39-203ENSMUST00000113706 Polr2mQ6P6I6 366 aa14.58□□□□□ -0.08
Trim39-203ENSMUST00000113706 Wdr92Q8BGF3 357 aa14.58□□□□□ -0.08
Trim39-203ENSMUST00000113706 Cadm2Q8BLQ9 435 aa14.58□□□□□ -0.08
Trim39-203ENSMUST00000113706 Gm4922Q8C0N0 497 aa14.58□□□□□ -0.08
Trim39-203ENSMUST00000113706 A730049H05RikQ8C940 139 aa14.58□□□□□ -0.08
Trim39-203ENSMUST00000113706 Rfwd3Q8CIK8 774 aa14.58□□□□□ -0.08
Trim39-203ENSMUST00000113706 Tssk6Q925K9 273 aa14.58□□□□□ -0.08
Trim39-203ENSMUST00000113706 Med31Q9CXU1 131 aaKnown RBP14.58□□□□□ -0.08
Trim39-203ENSMUST00000113706 Taf8Q9EQH4 308 aa14.58□□□□□ -0.08
Trim39-203ENSMUST00000113706 Gm8973D3YX71 104 aa14.57□□□□□ -0.08
Trim39-203ENSMUST00000113706 Gm3149E9PW52 257 aa14.57□□□□□ -0.08
Trim39-203ENSMUST00000113706 Gm21103E9Q2Q1 267 aa14.57□□□□□ -0.08
Trim39-203ENSMUST00000113706 Gm3476K7N6V0 257 aa14.57□□□□□ -0.08
Trim39-203ENSMUST00000113706 Gm8362K7N6Y6 257 aa14.57□□□□□ -0.08
Trim39-203ENSMUST00000113706 Cdx2P43241 311 aa14.57□□□□□ -0.08
Trim39-203ENSMUST00000113706 Tex52Q3TTI8 308 aa14.57□□□□□ -0.08
Trim39-203ENSMUST00000113706 2810021J22RikQ8BIB6 539 aa14.57□□□□□ -0.08
Trim39-203ENSMUST00000113706 Zc3h12dQ8BIY3 533 aa14.57□□□□□ -0.08
Trim39-203ENSMUST00000113706 PpcsQ8VDG5 311 aa14.57□□□□□ -0.08
Trim39-203ENSMUST00000113706 Uckl1Q91YL3 548 aa14.57□□□□□ -0.08
Trim39-203ENSMUST00000113706 Moap1Q9ERH6 352 aa14.57□□□□□ -0.08
Trim39-203ENSMUST00000113706 Foxo1Q9R1E0 652 aa14.57□□□□□ -0.08
Trim39-203ENSMUST00000113706 Chrna10B2RX82 447 aa14.57□□□□□ -0.08
Trim39-203ENSMUST00000113706 Gm3636E9Q5P1 227 aa14.57□□□□□ -0.08
Trim39-203ENSMUST00000113706 Fgf3P05524 245 aa14.57□□□□□ -0.08
Trim39-203ENSMUST00000113706 Ggta1P23336 394 aa14.57□□□□□ -0.08
Trim39-203ENSMUST00000113706 RptnP97347 1118 aa14.57□□□□□ -0.08
Trim39-203ENSMUST00000113706 Obox3Q3UT54 335 aa14.57□□□□□ -0.08
Trim39-203ENSMUST00000113706 Bbs1Q3V3N7 593 aa14.57□□□□□ -0.08
Trim39-203ENSMUST00000113706 Arhgef39Q66JY6 344 aa14.57□□□□□ -0.08
Trim39-203ENSMUST00000113706 St7lQ8K4P7 559 aa14.57□□□□□ -0.08
Trim39-203ENSMUST00000113706 Olfr769Q8K501 312 aa14.57□□□□□ -0.08
Trim39-203ENSMUST00000113706 Ugt2b37Q8VCN3 530 aa14.57□□□□□ -0.08
Trim39-203ENSMUST00000113706 Cstf1Q99LC2 431 aaKnown RBP14.57□□□□□ -0.08
Trim39-203ENSMUST00000113706 Cpn2Q9DBB9 547 aa14.57□□□□□ -0.08
Trim39-203ENSMUST00000113706 Brix1Q9DCA5 353 aaKnown RBP14.57□□□□□ -0.08
Trim39-203ENSMUST00000113706 Trim2Q9ESN6 744 aaKnown RBP14.57□□□□□ -0.08
Trim39-203ENSMUST00000113706 Lpar2Q9JL06 348 aa14.57□□□□□ -0.08
Trim39-203ENSMUST00000113706 Isg20Q9JL16 300 aa14.57□□□□□ -0.08
Trim39-203ENSMUST00000113706 RlimQ9WTV7 600 aa14.57□□□□□ -0.08
Trim39-203ENSMUST00000113706 AtmQ62388 3066 aa14.57□□□□□ -0.08
Trim39-203ENSMUST00000113706 Pramef25A2ASI9 494 aa14.56□□□□□ -0.08
Trim39-203ENSMUST00000113706 Cbfa2t3O54972 620 aa14.56□□□□□ -0.08
Trim39-203ENSMUST00000113706 PpiaP17742 164 aaKnown RBP14.56□□□□□ -0.08
Trim39-203ENSMUST00000113706 Tnfaip3Q60769 775 aa14.56□□□□□ -0.08
Trim39-203ENSMUST00000113706 Elavl4Q61701 385 aaKnown RBP14.56□□□□□ -0.08
Trim39-203ENSMUST00000113706 Doxl2Q6IMK7 723 aa14.56□□□□□ -0.08
Trim39-203ENSMUST00000113706 Hs6st2Q80UW0 612 aa14.56□□□□□ -0.08
Trim39-203ENSMUST00000113706 Synpo2lQ8BWB1 975 aa14.56□□□□□ -0.08
Trim39-203ENSMUST00000113706 Cpne5Q8JZW4 593 aa14.56□□□□□ -0.08
Trim39-203ENSMUST00000113706 Gpx4Q91XR9 253 aa14.56□□□□□ -0.08
Trim39-203ENSMUST00000113706 OgfrQ99PG2 633 aa14.56□□□□□ -0.08
Trim39-203ENSMUST00000113706 Lamtor5Q9D1L9 91 aa14.56□□□□□ -0.08
Trim39-203ENSMUST00000113706 PgdQ9DCD0 483 aa14.56□□□□□ -0.08
Trim39-203ENSMUST00000113706 HrgQ9ESB3 525 aa14.56□□□□□ -0.08
Trim39-203ENSMUST00000113706 Ulk2Q9QY01 1037 aa14.56□□□□□ -0.08
Trim39-203ENSMUST00000113706 Tyk2Q9R117 1184 aa14.56□□□□□ -0.08
Trim39-203ENSMUST00000113706 Ighv16-1A0A0A6YW39 117 aa14.56□□□□□ -0.08
Trim39-203ENSMUST00000113706 Ppp1r3dA2AJW4 279 aa14.56□□□□□ -0.08
Trim39-203ENSMUST00000113706 H2-ObO35424 271 aa14.56□□□□□ -0.08
Trim39-203ENSMUST00000113706 Adh1P00329 375 aa14.56□□□□□ -0.08
Trim39-203ENSMUST00000113706 DcnP28654 354 aa14.56□□□□□ -0.08
Trim39-203ENSMUST00000113706 Gnb5P62881 395 aa14.56□□□□□ -0.08
Trim39-203ENSMUST00000113706 Elavl1P70372 326 aaKnown RBP14.56□□□□□ -0.08
Trim39-203ENSMUST00000113706 Col10a1Q05306 680 aa14.56□□□□□ -0.08
Trim39-203ENSMUST00000113706 Zfp235Q499D5 702 aa14.56□□□□□ -0.08
Trim39-203ENSMUST00000113706 Znf182Q6P560 627 aa14.56□□□□□ -0.08
Trim39-203ENSMUST00000113706 Mterf4Q8BVN4 346 aa14.56□□□□□ -0.08
Trim39-203ENSMUST00000113706 RfkQ8CFV9 155 aa14.56□□□□□ -0.08
Trim39-203ENSMUST00000113706 P2rx2Q8K3P1 485 aa14.56□□□□□ -0.08
Trim39-203ENSMUST00000113706 HypmQ9CR04 117 aa14.56□□□□□ -0.08
Trim39-203ENSMUST00000113706 March7Q9WV66 693 aa14.56□□□□□ -0.08
Trim39-203ENSMUST00000113706 Ptdss2Q9Z1X2 473 aa14.56□□□□□ -0.08
Trim39-203ENSMUST00000113706 Olfr228A0A1L1SR98 313 aa14.56□□□□□ -0.08
Trim39-203ENSMUST00000113706 Fnd3c2A2AP83 941 aa14.56□□□□□ -0.08
Trim39-203ENSMUST00000113706 1700017D01RikG5E851 209 aa14.56□□□□□ -0.08
Trim39-203ENSMUST00000113706 Socs1O35716 212 aa14.56□□□□□ -0.08
Trim39-203ENSMUST00000113706 EdaO54693 391 aa14.56□□□□□ -0.08
Trim39-203ENSMUST00000113706 Gabrb1P50571 474 aa14.56□□□□□ -0.08
Trim39-203ENSMUST00000113706 Htr1fQ02284 366 aa14.56□□□□□ -0.08
Trim39-203ENSMUST00000113706 Fam187bQ0VAY3 358 aa14.56□□□□□ -0.08
Trim39-203ENSMUST00000113706 Nlrc3Q5DU56 1064 aa14.56□□□□□ -0.08
Retrieved 100 of 22,080 RNA–protein pairs in 28.1 ms