RNA–Protein interactions for RNA: ENST00000641927.1

PHGDH-230, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,678 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-230ENST00000641927 LHX2P50458 406 aa15.71■□□□□ 0.11
PHGDH-230ENST00000641927 SUCLG1P53597 346 aaKnown RBP15.71■□□□□ 0.11
PHGDH-230ENST00000641927 OR2B6P58173 313 aa15.71■□□□□ 0.11
PHGDH-230ENST00000641927 HSF1Q00613 529 aa15.71■□□□□ 0.11
PHGDH-230ENST00000641927 LTBQ06643 244 aa15.71■□□□□ 0.11
PHGDH-230ENST00000641927 ZIK1Q3SY52 487 aaPredicted RBP15.71■□□□□ 0.11
PHGDH-230ENST00000641927 KLHL17Q6TDP4 642 aa15.71■□□□□ 0.11
PHGDH-230ENST00000641927 MAMDC2Q7Z304 686 aaPredicted RBP15.71■□□□□ 0.11
PHGDH-230ENST00000641927 SLC46A3Q7Z3Q1 461 aa15.71■□□□□ 0.11
PHGDH-230ENST00000641927 OR51A7Q8NH64 312 aa15.71■□□□□ 0.11
PHGDH-230ENST00000641927 MFSD8Q8NHS3 518 aa15.71■□□□□ 0.11
PHGDH-230ENST00000641927 DNAJC9Q8WXX5 260 aa15.71■□□□□ 0.11
PHGDH-230ENST00000641927 NBEAQ8NFP9 2946 aa15.71■□□□□ 0.11
PHGDH-230ENST00000641927 TRAV27A0A087WT01 109 aa15.7■□□□□ 0.1
PHGDH-230ENST00000641927 A0A0J9YW62 118 aa15.7■□□□□ 0.1
PHGDH-230ENST00000641927 LIPT2A6NK58 231 aa15.7■□□□□ 0.1
PHGDH-230ENST00000641927 H3BN98 237 aa15.7■□□□□ 0.1
PHGDH-230ENST00000641927 KLF4O43474 513 aa15.7■□□□□ 0.1
PHGDH-230ENST00000641927 RAD23AP54725 363 aa15.7■□□□□ 0.1
PHGDH-230ENST00000641927 COX10Q12887 443 aa15.7■□□□□ 0.1
PHGDH-230ENST00000641927 GXYLT1Q4G148 440 aa15.7■□□□□ 0.1
PHGDH-230ENST00000641927 HBMQ6B0K9 141 aa15.7■□□□□ 0.1
PHGDH-230ENST00000641927 VASNQ6EMK4 673 aa15.7■□□□□ 0.1
PHGDH-230ENST00000641927 IZUMO2Q6UXV1 221 aa15.7■□□□□ 0.1
PHGDH-230ENST00000641927 TMPPEQ6ZT21 453 aa15.7■□□□□ 0.1
PHGDH-230ENST00000641927 ESPNLQ6ZVH7 1005 aa15.7■□□□□ 0.1
PHGDH-230ENST00000641927 GGNQ86UU5 652 aa15.7■□□□□ 0.1
PHGDH-230ENST00000641927 MEIOBQ8N635 442 aa15.7■□□□□ 0.1
PHGDH-230ENST00000641927 ASPNQ9BXN1 380 aa15.7■□□□□ 0.1
PHGDH-230ENST00000641927 RIBC2Q9H4K1 309 aa15.7■□□□□ 0.1
PHGDH-230ENST00000641927 FKRPQ9H9S5 495 aa15.7■□□□□ 0.1
PHGDH-230ENST00000641927 SMPD3Q9NY59 655 aaPredicted RBP15.7■□□□□ 0.1
PHGDH-230ENST00000641927 ZNF229Q9UJW7 825 aa15.7■□□□□ 0.1
PHGDH-230ENST00000641927 SPENQ96T58 3664 aaKnown RBP15.7■□□□□ 0.1
PHGDH-230ENST00000641927 A0A1B0GTH9 108 aa15.7■□□□□ 0.1
PHGDH-230ENST00000641927 TTLL8A6PVC2 850 aa15.7■□□□□ 0.1
PHGDH-230ENST00000641927 BLOC1S5-TXNDC5H3BN57 136 aa15.7■□□□□ 0.1
PHGDH-230ENST00000641927 ZNF708P17019 499 aa15.7■□□□□ 0.1
PHGDH-230ENST00000641927 POU1F1P28069 291 aa15.7■□□□□ 0.1
PHGDH-230ENST00000641927 GRPRP30550 384 aa15.7■□□□□ 0.1
PHGDH-230ENST00000641927 EIF1AXP47813 144 aaKnown RBP15.7■□□□□ 0.1
PHGDH-230ENST00000641927 AQP4P55087 323 aa15.7■□□□□ 0.1
PHGDH-230ENST00000641927 CLDN18P56856 261 aa15.7■□□□□ 0.1
PHGDH-230ENST00000641927 CARD18P57730 90 aa15.7■□□□□ 0.1
PHGDH-230ENST00000641927 CSNK2A1P68400 391 aaPredicted RBP15.7■□□□□ 0.1
PHGDH-230ENST00000641927 C3AR1Q16581 482 aa15.7■□□□□ 0.1
PHGDH-230ENST00000641927 NHSL2Q5HYW2 709 aa15.7■□□□□ 0.1
PHGDH-230ENST00000641927 PCSK4Q6UW60 755 aa15.7■□□□□ 0.1
PHGDH-230ENST00000641927 NANOGNBQ7Z5D8 188 aa15.7■□□□□ 0.1
PHGDH-230ENST00000641927 OR2V1Q8NHB1 315 aa15.7■□□□□ 0.1
PHGDH-230ENST00000641927 FANK1Q8TC84 345 aa15.7■□□□□ 0.1
PHGDH-230ENST00000641927 MIB2Q96AX9 1013 aa15.7■□□□□ 0.1
PHGDH-230ENST00000641927 SNRNP40Q96DI7 357 aaKnown RBP15.7■□□□□ 0.1
PHGDH-230ENST00000641927 TIMP4Q99727 224 aa15.7■□□□□ 0.1
PHGDH-230ENST00000641927 EGLN3Q9H6Z9 239 aa15.7■□□□□ 0.1
PHGDH-230ENST00000641927 SEC14L4Q9UDX3 406 aa15.7■□□□□ 0.1
PHGDH-230ENST00000641927 CAMK2AQ9UQM7 478 aa15.7■□□□□ 0.1
PHGDH-230ENST00000641927 PRRC2CQ9Y520 2896 aaKnown RBP15.69■□□□□ 0.1
PHGDH-230ENST00000641927 ZNF407Q9C0G0 2248 aa15.69■□□□□ 0.1
PHGDH-230ENST00000641927 FTCDNL1E5RQL4 147 aa15.69■□□□□ 0.1
PHGDH-230ENST00000641927 NPIPA2E9PIF3 369 aa15.69■□□□□ 0.1
PHGDH-230ENST00000641927 NPIPA3F8WFD2 350 aa15.69■□□□□ 0.1
PHGDH-230ENST00000641927 M0R082 166 aa15.69■□□□□ 0.1
PHGDH-230ENST00000641927 AQP7O14520 342 aa15.69■□□□□ 0.1
PHGDH-230ENST00000641927 ZNHIT1O43257 154 aa15.69■□□□□ 0.1
PHGDH-230ENST00000641927 SNAP29O95721 258 aa15.69■□□□□ 0.1
PHGDH-230ENST00000641927 CDH2P19022 906 aaPredicted RBP15.69■□□□□ 0.1
PHGDH-230ENST00000641927 SLC9A3P48764 834 aa15.69■□□□□ 0.1
PHGDH-230ENST00000641927 SLC35A1P78382 337 aa15.69■□□□□ 0.1
PHGDH-230ENST00000641927 PMS2P3Q13401 168 aa15.69■□□□□ 0.1
PHGDH-230ENST00000641927 MFSD13AQ14CX5 517 aa15.69■□□□□ 0.1
PHGDH-230ENST00000641927 TAF11Q15544 211 aa15.69■□□□□ 0.1
PHGDH-230ENST00000641927 SGCBQ16585 318 aa15.69■□□□□ 0.1
PHGDH-230ENST00000641927 CTU2Q2VPK5 515 aaKnown RBP15.69■□□□□ 0.1
PHGDH-230ENST00000641927 SLC36A3Q495N2 470 aa15.69■□□□□ 0.1
PHGDH-230ENST00000641927 PRR30Q53SZ7 412 aaPredicted RBP15.69■□□□□ 0.1
PHGDH-230ENST00000641927 PDSS1Q5T2R2 415 aa15.69■□□□□ 0.1
PHGDH-230ENST00000641927 ARHGAP11AQ6P4F7 1023 aa15.69■□□□□ 0.1
PHGDH-230ENST00000641927 CD300LDQ6UXZ3 194 aa15.69■□□□□ 0.1
PHGDH-230ENST00000641927 OR6S1Q8NH40 331 aa15.69■□□□□ 0.1
PHGDH-230ENST00000641927 OR10D3Q8NH80 312 aa15.69■□□□□ 0.1
PHGDH-230ENST00000641927 ZNF417Q8TAU3 575 aa15.69■□□□□ 0.1
PHGDH-230ENST00000641927 FAR1Q8WVX9 515 aa15.69■□□□□ 0.1
PHGDH-230ENST00000641927 GPR137Q96N19 417 aa15.69■□□□□ 0.1
PHGDH-230ENST00000641927 TNFRSF13CQ96RJ3 184 aa15.69■□□□□ 0.1
PHGDH-230ENST00000641927 ZNF587Q96SQ5 575 aaPredicted RBP15.69■□□□□ 0.1
PHGDH-230ENST00000641927 ALKBH4Q9NXW9 302 aa15.69■□□□□ 0.1
PHGDH-230ENST00000641927 TRAPPC4Q9Y296 219 aa15.69■□□□□ 0.1
PHGDH-230ENST00000641927 USP24Q9UPU5 2620 aa15.69■□□□□ 0.1
PHGDH-230ENST00000641927 A0A1B0GVC2 190 aa15.68■□□□□ 0.1
PHGDH-230ENST00000641927 CXCL13O43927 109 aa15.68■□□□□ 0.1
PHGDH-230ENST00000641927 AKR7A3O95154 331 aa15.68■□□□□ 0.1
PHGDH-230ENST00000641927 PMS2P2O95744 297 aa15.68■□□□□ 0.1
PHGDH-230ENST00000641927 IGFBP1P08833 259 aaPredicted RBP15.68■□□□□ 0.1
PHGDH-230ENST00000641927 ASAH2BP0C7U1 165 aa15.68■□□□□ 0.1
PHGDH-230ENST00000641927 OSMP13725 252 aa15.68■□□□□ 0.1
PHGDH-230ENST00000641927 CLDN15P56746 228 aa15.68■□□□□ 0.1
PHGDH-230ENST00000641927 BCL2A1Q16548 175 aa15.68■□□□□ 0.1
PHGDH-230ENST00000641927 RFX4Q33E94 735 aa15.68■□□□□ 0.1
PHGDH-230ENST00000641927 ZBED5Q49AG3 693 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms