RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 KPNA4O00629 521 aaPredicted RBP14.31□□□□□ -0.12
CLN6-216ENST00000636876 LRRTM2O43300 516 aa14.31□□□□□ -0.12
CLN6-216ENST00000636876 EIF1BO60739 113 aaKnown RBP14.31□□□□□ -0.12
CLN6-216ENST00000636876 AQP8O94778 261 aa14.31□□□□□ -0.12
CLN6-216ENST00000636876 TGM6O95932 706 aa14.31□□□□□ -0.12
CLN6-216ENST00000636876 IGF2P01344 180 aa14.31□□□□□ -0.12
CLN6-216ENST00000636876 BGLAPP02818 100 aa14.31□□□□□ -0.12
CLN6-216ENST00000636876 GLI4P10075 376 aa14.31□□□□□ -0.12
CLN6-216ENST00000636876 FCGR2AP12318 317 aa14.31□□□□□ -0.12
CLN6-216ENST00000636876 ENPP1P22413 925 aa14.31□□□□□ -0.12
CLN6-216ENST00000636876 NUP107P57740 925 aa14.31□□□□□ -0.12
CLN6-216ENST00000636876 TMEM211Q6ICI0 200 aa14.31□□□□□ -0.12
CLN6-216ENST00000636876 OR2T5Q6IEZ7 315 aa14.31□□□□□ -0.12
CLN6-216ENST00000636876 PPP4R4Q6NUP7 873 aa14.31□□□□□ -0.12
CLN6-216ENST00000636876 PODNL1Q6PEZ8 512 aa14.31□□□□□ -0.12
CLN6-216ENST00000636876 P4HA3Q7Z4N8 544 aa14.31□□□□□ -0.12
CLN6-216ENST00000636876 FJX1Q86VR8 437 aa14.31□□□□□ -0.12
CLN6-216ENST00000636876 C9orf106Q8NAJ2 232 aa14.31□□□□□ -0.12
CLN6-216ENST00000636876 OR2T29Q8NH02 315 aa14.31□□□□□ -0.12
CLN6-216ENST00000636876 OR52J3Q8NH60 311 aa14.31□□□□□ -0.12
CLN6-216ENST00000636876 PFN4Q8NHR9 129 aa14.31□□□□□ -0.12
CLN6-216ENST00000636876 MBD3L2Q8NHZ7 208 aaPredicted RBP14.31□□□□□ -0.12
CLN6-216ENST00000636876 SLC7A13Q8TCU3 470 aa14.31□□□□□ -0.12
CLN6-216ENST00000636876 ROBO4Q8WZ75 1007 aa14.31□□□□□ -0.12
CLN6-216ENST00000636876 SLC25A36Q96CQ1 311 aa14.31□□□□□ -0.12
CLN6-216ENST00000636876 DOCK7Q96N67 2140 aa14.31□□□□□ -0.12
CLN6-216ENST00000636876 TM9SF2Q99805 663 aa14.31□□□□□ -0.12
CLN6-216ENST00000636876 PRRG4Q9BZD6 226 aa14.31□□□□□ -0.12
CLN6-216ENST00000636876 KLHL4Q9C0H6 718 aa14.31□□□□□ -0.12
CLN6-216ENST00000636876 COL12A1Q99715 3063 aa14.31□□□□□ -0.12
CLN6-216ENST00000636876 RELNP78509 3460 aa14.31□□□□□ -0.12
CLN6-216ENST00000636876 USP9XQ93008 2570 aaPredicted RBP14.3□□□□□ -0.12
CLN6-216ENST00000636876 IGHV3-15A0A0B4J1V0 119 aa14.3□□□□□ -0.12
CLN6-216ENST00000636876 ENO4A6NNW6 628 aa14.3□□□□□ -0.12
CLN6-216ENST00000636876 SMAD9O15198 467 aaKnown RBP14.3□□□□□ -0.12
CLN6-216ENST00000636876 PIP5K1CO60331 668 aa14.3□□□□□ -0.12
CLN6-216ENST00000636876 KRT36O76013 467 aa14.3□□□□□ -0.12
CLN6-216ENST00000636876 CST1P01037 141 aa14.3□□□□□ -0.12
CLN6-216ENST00000636876 KLK2P20151 261 aa14.3□□□□□ -0.12
CLN6-216ENST00000636876 TIMP3P35625 211 aa14.3□□□□□ -0.12
CLN6-216ENST00000636876 LSM11P83369 360 aaKnown RBP eCLIP14.3□□□□□ -0.12
CLN6-216ENST00000636876 LTBQ06643 244 aa14.3□□□□□ -0.12
CLN6-216ENST00000636876 PMPCAQ10713 525 aa14.3□□□□□ -0.12
CLN6-216ENST00000636876 MFSD13AQ14CX5 517 aa14.3□□□□□ -0.12
CLN6-216ENST00000636876 RIPPLY2Q5TAB7 128 aa14.3□□□□□ -0.12
CLN6-216ENST00000636876 PAQR6Q6TCH4 344 aa14.3□□□□□ -0.12
CLN6-216ENST00000636876 ZNF730Q6ZMV8 503 aa14.3□□□□□ -0.12
CLN6-216ENST00000636876 NCCRP1Q6ZVX7 275 aaPredicted RBP14.3□□□□□ -0.12
CLN6-216ENST00000636876 MBOAT2Q6ZWT7 520 aa14.3□□□□□ -0.12
CLN6-216ENST00000636876 FCRLAQ7L513 359 aa14.3□□□□□ -0.12
CLN6-216ENST00000636876 RNF113BQ8IZP6 322 aaKnown RBP14.3□□□□□ -0.12
CLN6-216ENST00000636876 C10orf53Q8N6V4 93 aa14.3□□□□□ -0.12
CLN6-216ENST00000636876 RNF128Q8TEB7 428 aa14.3□□□□□ -0.12
CLN6-216ENST00000636876 MOGAT1Q96PD6 335 aa14.3□□□□□ -0.12
CLN6-216ENST00000636876 NAA11Q9BSU3 229 aaPredicted RBP14.3□□□□□ -0.12
CLN6-216ENST00000636876 ARMC1Q9NVT9 282 aa14.3□□□□□ -0.12
CLN6-216ENST00000636876 VNN3Q9NY84 501 aa14.3□□□□□ -0.12
CLN6-216ENST00000636876 AP4S1Q9Y587 144 aa14.3□□□□□ -0.12
CLN6-216ENST00000636876 LYVE1Q9Y5Y7 322 aa14.3□□□□□ -0.12
CLN6-216ENST00000636876 MED12LQ86YW9 2145 aa14.3□□□□□ -0.12
CLN6-216ENST00000636876 SH3PXD2BA1X283 911 aa14.29□□□□□ -0.12
CLN6-216ENST00000636876 HTR3EA5X5Y0 456 aa14.29□□□□□ -0.12
CLN6-216ENST00000636876 ZNF814B7Z6K7 855 aa14.29□□□□□ -0.12
CLN6-216ENST00000636876 LRRN3E7EW58 273 aa14.29□□□□□ -0.12
CLN6-216ENST00000636876 TNFRSF11BO00300 401 aa14.29□□□□□ -0.12
CLN6-216ENST00000636876 TOXO94900 526 aa14.29□□□□□ -0.12
CLN6-216ENST00000636876 AKR7A3O95154 331 aa14.29□□□□□ -0.12
CLN6-216ENST00000636876 CH25HO95992 272 aa14.29□□□□□ -0.12
CLN6-216ENST00000636876 MT-ATP6P00846 226 aa14.29□□□□□ -0.12
CLN6-216ENST00000636876 GTF2E2P29084 291 aaKnown RBP14.29□□□□□ -0.12
CLN6-216ENST00000636876 GRPRP30550 384 aa14.29□□□□□ -0.12
CLN6-216ENST00000636876 CEACAM8P31997 349 aaPredicted RBP14.29□□□□□ -0.12
CLN6-216ENST00000636876 LIMS1P48059 325 aa14.29□□□□□ -0.12
CLN6-216ENST00000636876 HMGA2P52926 109 aa14.29□□□□□ -0.12
CLN6-216ENST00000636876 CTBP2P56545 445 aa14.29□□□□□ -0.12
CLN6-216ENST00000636876 H3F3AP84243 136 aa14.29□□□□□ -0.12
CLN6-216ENST00000636876 SEC23BQ15437 767 aa14.29□□□□□ -0.12
CLN6-216ENST00000636876 ZNF74Q16587 644 aa14.29□□□□□ -0.12
CLN6-216ENST00000636876 ABLIM2Q6H8Q1 611 aa14.29□□□□□ -0.12
CLN6-216ENST00000636876 MTFR2Q6P444 385 aa14.29□□□□□ -0.12
CLN6-216ENST00000636876 TBPL2Q6SJ96 375 aa14.29□□□□□ -0.12
CLN6-216ENST00000636876 RRM2BQ7LG56 351 aa14.29□□□□□ -0.12
CLN6-216ENST00000636876 SLC46A3Q7Z3Q1 461 aa14.29□□□□□ -0.12
CLN6-216ENST00000636876 NRMQ8IXM6 262 aa14.29□□□□□ -0.12
CLN6-216ENST00000636876 SLC43A2Q8N370 569 aa14.29□□□□□ -0.12
CLN6-216ENST00000636876 TMEM99Q8N816 258 aa14.29□□□□□ -0.12
CLN6-216ENST00000636876 OR4C15Q8NGM1 316 aa14.29□□□□□ -0.12
CLN6-216ENST00000636876 SGTBQ96EQ0 304 aa14.29□□□□□ -0.12
CLN6-216ENST00000636876 ALPK1Q96QP1 1244 aa14.29□□□□□ -0.12
CLN6-216ENST00000636876 REEP1Q9H902 201 aa14.29□□□□□ -0.12
CLN6-216ENST00000636876 FKRPQ9H9S5 495 aa14.29□□□□□ -0.12
CLN6-216ENST00000636876 RNF122Q9H9V4 155 aa14.29□□□□□ -0.12
CLN6-216ENST00000636876 C20orf141Q9NUB4 165 aa14.29□□□□□ -0.12
CLN6-216ENST00000636876 SLC5A6Q9Y289 635 aa14.29□□□□□ -0.12
CLN6-216ENST00000636876 CORINQ9Y5Q5 1042 aa14.29□□□□□ -0.12
CLN6-216ENST00000636876 AQP7P3A6NL99 342 aa14.28□□□□□ -0.12
CLN6-216ENST00000636876 M0R082 166 aa14.28□□□□□ -0.12
CLN6-216ENST00000636876 CYTIPO60759 359 aa14.28□□□□□ -0.12
CLN6-216ENST00000636876 TIPRLO75663 272 aa14.28□□□□□ -0.12
CLN6-216ENST00000636876 OR7A10O76100 309 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms