RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 BOD1Q96IK1 185 aa16.61■□□□□ 0.25
CACNA1A-227ENST00000636549 GAL3ST2Q9H3Q3 398 aa16.61■□□□□ 0.25
CACNA1A-227ENST00000636549 ROBO4Q8WZ75 1007 aa16.61■□□□□ 0.25
CACNA1A-227ENST00000636549 ZNF419Q96HQ0 510 aaPredicted RBP16.61■□□□□ 0.25
CACNA1A-227ENST00000636549 ESRP2Q9H6T0 727 aaKnown RBP16.61■□□□□ 0.25
CACNA1A-227ENST00000636549 B3GALNT1O75752 331 aa16.61■□□□□ 0.25
CACNA1A-227ENST00000636549 ANKRD9Q96BM1 317 aaPredicted RBP16.61■□□□□ 0.25
CACNA1A-227ENST00000636549 METTL9Q9H1A3 318 aa16.61■□□□□ 0.25
CACNA1A-227ENST00000636549 TREM2Q9NZC2 230 aa16.61■□□□□ 0.25
CACNA1A-227ENST00000636549 MYH6P13533 1939 aa16.61■□□□□ 0.25
CACNA1A-227ENST00000636549 RAB13P51153 203 aa16.6■□□□□ 0.25
CACNA1A-227ENST00000636549 PPIAP62937 165 aaKnown RBP16.6■□□□□ 0.25
CACNA1A-227ENST00000636549 EBPQ15125 230 aaKnown RBP16.6■□□□□ 0.25
CACNA1A-227ENST00000636549 GFRALQ6UXV0 394 aa16.6■□□□□ 0.25
CACNA1A-227ENST00000636549 METTL25Q8N6Q8 603 aa16.6■□□□□ 0.25
CACNA1A-227ENST00000636549 DVL3Q92997 716 aaPredicted RBP16.6■□□□□ 0.25
CACNA1A-227ENST00000636549 FAM122AQ96E09 287 aa16.6■□□□□ 0.25
CACNA1A-227ENST00000636549 CACNG6Q9BXT2 260 aa16.6■□□□□ 0.25
CACNA1A-227ENST00000636549 DCAF16Q9NXF7 216 aa16.6■□□□□ 0.25
CACNA1A-227ENST00000636549 CLCF1Q9UBD9 225 aa16.6■□□□□ 0.25
CACNA1A-227ENST00000636549 SLC6A5Q9Y345 797 aa16.6■□□□□ 0.25
CACNA1A-227ENST00000636549 FAM122CQ6P4D5 195 aa16.6■□□□□ 0.25
CACNA1A-227ENST00000636549 PDZD3Q86UT5 571 aa16.6■□□□□ 0.25
CACNA1A-227ENST00000636549 NECAP1Q8NC96 275 aa16.6■□□□□ 0.25
CACNA1A-227ENST00000636549 TCEAL2Q9H3H9 227 aaPredicted RBP16.6■□□□□ 0.25
CACNA1A-227ENST00000636549 LGI1O95970 557 aa16.6■□□□□ 0.25
CACNA1A-227ENST00000636549 KIR2DL3P43628 341 aa16.6■□□□□ 0.25
CACNA1A-227ENST00000636549 TUBA3CQ13748 450 aa16.6■□□□□ 0.25
CACNA1A-227ENST00000636549 MAFAQ8NHW3 353 aaPredicted RBP16.6■□□□□ 0.25
CACNA1A-227ENST00000636549 CCDC74AQ96AQ1 378 aa16.6■□□□□ 0.25
CACNA1A-227ENST00000636549 TUBA8Q9NY65 449 aaPredicted RBP16.6■□□□□ 0.25
CACNA1A-227ENST00000636549 SIRPB1O00241 398 aa16.6■□□□□ 0.25
CACNA1A-227ENST00000636549 HMGN2P05204 90 aaKnown RBP16.6■□□□□ 0.25
CACNA1A-227ENST00000636549 CDK1P06493 297 aa16.6■□□□□ 0.25
CACNA1A-227ENST00000636549 PCSK2P16519 638 aa16.6■□□□□ 0.25
CACNA1A-227ENST00000636549 UBE2IP63279 158 aaKnown RBP16.6■□□□□ 0.25
CACNA1A-227ENST00000636549 SMUG1Q53HV7 270 aa16.6■□□□□ 0.25
CACNA1A-227ENST00000636549 LINC01599Q8WXQ3 324 aa16.6■□□□□ 0.25
CACNA1A-227ENST00000636549 AGPAT4Q9NRZ5 378 aa16.6■□□□□ 0.25
CACNA1A-227ENST00000636549 MYH3P11055 1940 aa16.6■□□□□ 0.25
CACNA1A-227ENST00000636549 A0A1W2PR80 420 aa16.6■□□□□ 0.25
CACNA1A-227ENST00000636549 WNT11O96014 354 aa16.6■□□□□ 0.25
CACNA1A-227ENST00000636549 CHRNB1P11230 501 aa16.6■□□□□ 0.25
CACNA1A-227ENST00000636549 C14orf28Q4W4Y0 310 aa16.6■□□□□ 0.25
CACNA1A-227ENST00000636549 SLC6A19Q695T7 634 aa16.6■□□□□ 0.25
CACNA1A-227ENST00000636549 RFLNAQ6ZTI6 216 aa16.6■□□□□ 0.25
CACNA1A-227ENST00000636549 CXorf67Q86X51 503 aaPredicted RBP16.6■□□□□ 0.25
CACNA1A-227ENST00000636549 PDZD9Q8IXQ8 264 aa16.6■□□□□ 0.25
CACNA1A-227ENST00000636549 ZNF784Q8NCA9 323 aaPredicted RBP16.6■□□□□ 0.25
CACNA1A-227ENST00000636549 OR6F1Q8NGZ6 308 aa16.6■□□□□ 0.25
CACNA1A-227ENST00000636549 SEC22AQ96IW7 307 aa16.6■□□□□ 0.25
CACNA1A-227ENST00000636549 INSM2Q96T92 566 aaPredicted RBP16.6■□□□□ 0.25
CACNA1A-227ENST00000636549 PURGQ9UJV8 347 aaKnown RBP16.6■□□□□ 0.25
CACNA1A-227ENST00000636549 CREB3L2Q70SY1 520 aa16.59■□□□□ 0.25
CACNA1A-227ENST00000636549 CMIPQ8IY22 773 aa16.59■□□□□ 0.25
CACNA1A-227ENST00000636549 C11orf42Q8N5U0 333 aa16.59■□□□□ 0.25
CACNA1A-227ENST00000636549 J3KRW8 73 aa16.59■□□□□ 0.25
CACNA1A-227ENST00000636549 GLI4P10075 376 aa16.59■□□□□ 0.25
CACNA1A-227ENST00000636549 RGRP47804 291 aa16.59■□□□□ 0.25
CACNA1A-227ENST00000636549 C6orf15Q6UXA7 325 aaPredicted RBP16.59■□□□□ 0.25
CACNA1A-227ENST00000636549 OR6V1Q8N148 313 aa16.59■□□□□ 0.25
CACNA1A-227ENST00000636549 TMEM178AQ8NBL3 297 aa16.59■□□□□ 0.25
CACNA1A-227ENST00000636549 TANKQ92844 425 aa16.59■□□□□ 0.25
CACNA1A-227ENST00000636549 PRR14Q9BWN1 585 aa16.59■□□□□ 0.25
CACNA1A-227ENST00000636549 SLC19A3Q9BZV2 496 aa16.59■□□□□ 0.25
CACNA1A-227ENST00000636549 NAGKQ9UJ70 344 aa16.59■□□□□ 0.25
CACNA1A-227ENST00000636549 PIGLQ9Y2B2 252 aa16.59■□□□□ 0.25
CACNA1A-227ENST00000636549 C4orf47A7E2U8 309 aa16.59■□□□□ 0.25
CACNA1A-227ENST00000636549 SLC22A2O15244 555 aa16.59■□□□□ 0.25
CACNA1A-227ENST00000636549 PCBP3P57721 371 aaKnown RBP16.59■□□□□ 0.25
CACNA1A-227ENST00000636549 MICAQ29983 383 aa16.59■□□□□ 0.25
CACNA1A-227ENST00000636549 VWA2Q5GFL6 755 aa16.59■□□□□ 0.25
CACNA1A-227ENST00000636549 SCML4Q8N228 414 aa16.59■□□□□ 0.25
CACNA1A-227ENST00000636549 RNF128Q8TEB7 428 aa16.59■□□□□ 0.25
CACNA1A-227ENST00000636549 TLCD1Q96CP7 247 aa16.59■□□□□ 0.25
CACNA1A-227ENST00000636549 CRLF2Q9HC73 371 aa16.59■□□□□ 0.25
CACNA1A-227ENST00000636549 TNFSF11O14788 317 aa16.59■□□□□ 0.25
CACNA1A-227ENST00000636549 AKAIN1P0CW23 69 aa16.59■□□□□ 0.25
CACNA1A-227ENST00000636549 MAKP20794 623 aa16.59■□□□□ 0.25
CACNA1A-227ENST00000636549 C18orf63Q68DL7 685 aa16.59■□□□□ 0.25
CACNA1A-227ENST00000636549 ST8SIA2Q92186 375 aa16.59■□□□□ 0.25
CACNA1A-227ENST00000636549 ELMOD3Q96FG2 381 aa16.59■□□□□ 0.25
CACNA1A-227ENST00000636549 ZNF597Q96LX8 424 aa16.59■□□□□ 0.25
CACNA1A-227ENST00000636549 AMDHD1Q96NU7 426 aa16.59■□□□□ 0.25
CACNA1A-227ENST00000636549 UHRF2Q96PU4 802 aa16.59■□□□□ 0.25
CACNA1A-227ENST00000636549 CPNE5Q9HCH3 593 aa16.59■□□□□ 0.25
CACNA1A-227ENST00000636549 THSD1Q9NS62 852 aa16.59■□□□□ 0.25
CACNA1A-227ENST00000636549 ATG4BQ9Y4P1 393 aa16.59■□□□□ 0.25
CACNA1A-227ENST00000636549 TMX2-CTNND1H3BSU7 103 aa16.59■□□□□ 0.25
CACNA1A-227ENST00000636549 RNF151Q2KHN1 245 aa16.59■□□□□ 0.25
CACNA1A-227ENST00000636549 MFSD12Q6NUT3 480 aa16.59■□□□□ 0.25
CACNA1A-227ENST00000636549 GPR148Q8TDV2 347 aa16.59■□□□□ 0.25
CACNA1A-227ENST00000636549 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.59■□□□□ 0.25
CACNA1A-227ENST00000636549 VAPAQ9P0L0 249 aa16.59■□□□□ 0.25
CACNA1A-227ENST00000636549 MYH11P35749 1972 aa16.59■□□□□ 0.25
CACNA1A-227ENST00000636549 GOSR1O95249 250 aa16.59■□□□□ 0.25
CACNA1A-227ENST00000636549 PCBD1P61457 104 aa16.59■□□□□ 0.25
CACNA1A-227ENST00000636549 CXADRP78310 365 aa16.59■□□□□ 0.25
CACNA1A-227ENST00000636549 GPLD1P80108 840 aa16.59■□□□□ 0.25
CACNA1A-227ENST00000636549 FLI1Q01543 452 aaPredicted RBP16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms