RNA–Protein interactions for RNA: ENST00000630925.1

SDCBP-213, Transcript of syndecan binding protein, humanhuman

TSL 5 BASIC

Gene SDCBP, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-213ENST00000630925 ZNF776Q68DI1 518 aaPredicted RBP4.37□□□□□ -1.71
SDCBP-213ENST00000630925 BHLHB9Q6PI77 547 aa4.37□□□□□ -1.71
SDCBP-213ENST00000630925 UNQ6126/PRO20091Q6UXV3 157 aa4.37□□□□□ -1.71
SDCBP-213ENST00000630925 RBMS3Q6XE24 437 aaKnown RBP4.37□□□□□ -1.71
SDCBP-213ENST00000630925 TTLL10Q6ZVT0 673 aa4.37□□□□□ -1.71
SDCBP-213ENST00000630925 ZNF534Q76KX8 674 aa4.37□□□□□ -1.71
SDCBP-213ENST00000630925 SLC16A14Q7RTX9 510 aa4.37□□□□□ -1.71
SDCBP-213ENST00000630925 TRMT1LQ7Z2T5 733 aaKnown RBP4.37□□□□□ -1.71
SDCBP-213ENST00000630925 DHFR2Q86XF0 187 aa4.37□□□□□ -1.71
SDCBP-213ENST00000630925 STPG2Q8N412 459 aa4.37□□□□□ -1.71
SDCBP-213ENST00000630925 TMEM217Q8N7C4 229 aa4.37□□□□□ -1.71
SDCBP-213ENST00000630925 PNPLA1Q8N8W4 532 aa4.37□□□□□ -1.71
SDCBP-213ENST00000630925 OR52I1Q8NGK6 324 aa4.37□□□□□ -1.71
SDCBP-213ENST00000630925 PIGXQ8TBF5 258 aa4.37□□□□□ -1.71
SDCBP-213ENST00000630925 APH1BQ8WW43 257 aa4.37□□□□□ -1.71
SDCBP-213ENST00000630925 PEX11GQ96HA9 241 aa4.37□□□□□ -1.71
SDCBP-213ENST00000630925 SERPINB12Q96P63 405 aa4.37□□□□□ -1.71
SDCBP-213ENST00000630925 ZIM3Q96PE6 472 aa4.37□□□□□ -1.71
SDCBP-213ENST00000630925 ECSITQ9BQ95 431 aa4.37□□□□□ -1.71
SDCBP-213ENST00000630925 CCDC3Q9BQI4 270 aa4.37□□□□□ -1.71
SDCBP-213ENST00000630925 IFT27Q9BW83 186 aa4.37□□□□□ -1.71
SDCBP-213ENST00000630925 UCK2Q9BZX2 261 aa4.37□□□□□ -1.71
SDCBP-213ENST00000630925 PARD6AQ9NPB6 346 aa4.37□□□□□ -1.71
SDCBP-213ENST00000630925 FZD3Q9NPG1 666 aa4.37□□□□□ -1.71
SDCBP-213ENST00000630925 ECHDC1Q9NTX5 307 aa4.37□□□□□ -1.71
SDCBP-213ENST00000630925 PTTG2Q9NZH5 202 aa4.37□□□□□ -1.71
SDCBP-213ENST00000630925 TMEM9Q9P0T7 183 aa4.37□□□□□ -1.71
SDCBP-213ENST00000630925 NDRG3Q9UGV2 375 aa4.37□□□□□ -1.71
SDCBP-213ENST00000630925 SLC6A5Q9Y345 797 aa4.37□□□□□ -1.71
SDCBP-213ENST00000630925 V9GYY9 64 aa4.37□□□□□ -1.71
SDCBP-213ENST00000630925 UBR3Q6ZT12 1888 aa4.37□□□□□ -1.71
SDCBP-213ENST00000630925 TRIOBPQ9H2D6 2365 aa4.37□□□□□ -1.71
SDCBP-213ENST00000630925 YTHDC2Q9H6S0 1430 aaKnown RBP4.37□□□□□ -1.71
SDCBP-213ENST00000630925 USP42Q9H9J4 1324 aaKnown RBP4.37□□□□□ -1.71
SDCBP-213ENST00000630925 LRP5LA4QPB2 252 aa4.37□□□□□ -1.71
SDCBP-213ENST00000630925 OR5K3A6NET4 321 aa4.37□□□□□ -1.71
SDCBP-213ENST00000630925 B5MCH6 92 aa4.37□□□□□ -1.71
SDCBP-213ENST00000630925 NPIPA3F8WFD2 350 aa4.37□□□□□ -1.71
SDCBP-213ENST00000630925 M0QZK8 103 aa4.37□□□□□ -1.71
SDCBP-213ENST00000630925 M0R082 166 aa4.37□□□□□ -1.71
SDCBP-213ENST00000630925 OR7A17O14581 309 aa4.37□□□□□ -1.71
SDCBP-213ENST00000630925 SLC16A4O15374 487 aa4.37□□□□□ -1.71
SDCBP-213ENST00000630925 ARPC5O15511 151 aa4.37□□□□□ -1.71
SDCBP-213ENST00000630925 SYT7O43581 403 aa4.37□□□□□ -1.71
SDCBP-213ENST00000630925 PRKAB2O43741 272 aa4.37□□□□□ -1.71
SDCBP-213ENST00000630925 EFEMP2O95967 443 aa4.37□□□□□ -1.71
SDCBP-213ENST00000630925 PPBPP02775 128 aa4.37□□□□□ -1.71
SDCBP-213ENST00000630925 RAF1P04049 648 aa4.37□□□□□ -1.71
SDCBP-213ENST00000630925 CD5P06127 495 aa4.37□□□□□ -1.71
SDCBP-213ENST00000630925 CDK1P06493 297 aa4.37□□□□□ -1.71
SDCBP-213ENST00000630925 SMIM18P0DKX4 95 aa4.37□□□□□ -1.71
SDCBP-213ENST00000630925 CT45A8P0DMV1 189 aa4.37□□□□□ -1.71
SDCBP-213ENST00000630925 CT45A9P0DMV2 189 aa4.37□□□□□ -1.71
SDCBP-213ENST00000630925 CDH1P12830 882 aa4.37□□□□□ -1.71
SDCBP-213ENST00000630925 KCNE1P15382 129 aa4.37□□□□□ -1.71
SDCBP-213ENST00000630925 TBXA2RP21731 343 aa4.37□□□□□ -1.71
SDCBP-213ENST00000630925 IVDP26440 423 aa4.37□□□□□ -1.71
SDCBP-213ENST00000630925 EPHA2P29317 976 aa4.37□□□□□ -1.71
SDCBP-213ENST00000630925 PRDX3P30048 256 aaKnown RBP4.37□□□□□ -1.71
SDCBP-213ENST00000630925 PRKXP51817 358 aa4.37□□□□□ -1.71
SDCBP-213ENST00000630925 EWSR1Q01844 656 aaKnown RBP eCLIP4.37□□□□□ -1.71
SDCBP-213ENST00000630925 OCA2Q04671 838 aa4.37□□□□□ -1.71
SDCBP-213ENST00000630925 CHRNEQ04844 493 aa4.37□□□□□ -1.71
SDCBP-213ENST00000630925 VPS26BQ4G0F5 336 aa4.37□□□□□ -1.71
SDCBP-213ENST00000630925 ESCO2Q56NI9 601 aa4.37□□□□□ -1.71
SDCBP-213ENST00000630925 SYT14P1Q58G82 188 aa4.37□□□□□ -1.71
SDCBP-213ENST00000630925 CT45A2Q5DJT8 189 aa4.37□□□□□ -1.71
SDCBP-213ENST00000630925 C1orf220Q5T0J3 134 aa4.37□□□□□ -1.71
SDCBP-213ENST00000630925 LCN10Q6JVE6 187 aa4.37□□□□□ -1.71
SDCBP-213ENST00000630925 LINC00336Q6ZUF6 198 aa4.37□□□□□ -1.71
SDCBP-213ENST00000630925 AHSA2Q719I0 299 aa4.37□□□□□ -1.71
SDCBP-213ENST00000630925 HORMAD1Q86X24 394 aa4.37□□□□□ -1.71
SDCBP-213ENST00000630925 MARCH9Q86YJ5 346 aa4.37□□□□□ -1.71
SDCBP-213ENST00000630925 WDFY1Q8IWB7 410 aa4.37□□□□□ -1.71
SDCBP-213ENST00000630925 TP53INP2Q8IXH6 220 aa4.37□□□□□ -1.71
SDCBP-213ENST00000630925 CLDN19Q8N6F1 224 aa4.37□□□□□ -1.71
SDCBP-213ENST00000630925 GCSAMQ8N6F7 178 aa4.37□□□□□ -1.71
SDCBP-213ENST00000630925 LINC01356Q8N9X3 169 aa4.37□□□□□ -1.71
SDCBP-213ENST00000630925 OR52N2Q8NGI0 321 aa4.37□□□□□ -1.71
SDCBP-213ENST00000630925 OR2Y1Q8NGV0 311 aa4.37□□□□□ -1.71
SDCBP-213ENST00000630925 ZNF417Q8TAU3 575 aa4.37□□□□□ -1.71
SDCBP-213ENST00000630925 RNASEH2CQ8TDP1 164 aaKnown RBP4.37□□□□□ -1.71
SDCBP-213ENST00000630925 SSMEM1Q8WWF3 244 aa4.37□□□□□ -1.71
SDCBP-213ENST00000630925 MARC2Q969Z3 335 aa4.37□□□□□ -1.71
SDCBP-213ENST00000630925 ISOC2Q96AB3 205 aa4.37□□□□□ -1.71
SDCBP-213ENST00000630925 RPEQ96AT9 228 aa4.37□□□□□ -1.71
SDCBP-213ENST00000630925 YIPF6Q96EC8 236 aa4.37□□□□□ -1.71
SDCBP-213ENST00000630925 LOXL4Q96JB6 756 aa4.37□□□□□ -1.71
SDCBP-213ENST00000630925 ZNF587Q96SQ5 575 aaPredicted RBP4.37□□□□□ -1.71
SDCBP-213ENST00000630925 CSTL1Q9H114 145 aa4.37□□□□□ -1.71
SDCBP-213ENST00000630925 ESRP2Q9H6T0 727 aaKnown RBP4.37□□□□□ -1.71
SDCBP-213ENST00000630925 ZNF430Q9H8G1 570 aaPredicted RBP4.37□□□□□ -1.71
SDCBP-213ENST00000630925 ACSS1Q9NUB1 689 aaPredicted RBP4.37□□□□□ -1.71
SDCBP-213ENST00000630925 NLE1Q9NVX2 485 aaPredicted RBP4.37□□□□□ -1.71
SDCBP-213ENST00000630925 GPATCH2LQ9NWQ4 482 aa4.37□□□□□ -1.71
SDCBP-213ENST00000630925 GUCA1BQ9UMX6 200 aa4.37□□□□□ -1.71
SDCBP-213ENST00000630925 WDR83OSQ9Y284 106 aa4.37□□□□□ -1.71
SDCBP-213ENST00000630925 KLHDC2Q9Y2U9 406 aa4.37□□□□□ -1.71
SDCBP-213ENST00000630925 PEX16Q9Y5Y5 336 aa4.37□□□□□ -1.71
SDCBP-213ENST00000630925 RANBP2P49792 3224 aaKnown RBP4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms