RNA–Protein interactions for RNA: ENST00000627587.2

PDLIM5-223, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-223ENST00000627587 SLC15A1P46059 708 aa8.6□□□□□ -1.03
PDLIM5-223ENST00000627587 MASP1P48740 699 aa8.6□□□□□ -1.03
PDLIM5-223ENST00000627587 PCYT1AP49585 367 aa8.6□□□□□ -1.03
PDLIM5-223ENST00000627587 CHAF1BQ13112 559 aa8.6□□□□□ -1.03
PDLIM5-223ENST00000627587 QPRTQ15274 297 aa8.6□□□□□ -1.03
PDLIM5-223ENST00000627587 SNAPC1Q16533 368 aa8.6□□□□□ -1.03
PDLIM5-223ENST00000627587 ZNF468Q5VIY5 522 aaPredicted RBP8.6□□□□□ -1.03
PDLIM5-223ENST00000627587 IL20RBQ6UXL0 311 aa8.6□□□□□ -1.03
PDLIM5-223ENST00000627587 MAMDC2Q7Z304 686 aaPredicted RBP8.6□□□□□ -1.03
PDLIM5-223ENST00000627587 TMEM156Q8N614 296 aa8.6□□□□□ -1.03
PDLIM5-223ENST00000627587 TCEANCQ8N8B7 351 aa8.6□□□□□ -1.03
PDLIM5-223ENST00000627587 OR2T33Q8NG76 320 aa8.6□□□□□ -1.03
PDLIM5-223ENST00000627587 BRIX1Q8TDN6 353 aaKnown RBP8.6□□□□□ -1.03
PDLIM5-223ENST00000627587 IPCEF1Q8WWN9 437 aaPredicted RBP8.6□□□□□ -1.03
PDLIM5-223ENST00000627587 TMEM234Q8WY98 164 aa8.6□□□□□ -1.03
PDLIM5-223ENST00000627587 PSMF1Q92530 271 aa8.6□□□□□ -1.03
PDLIM5-223ENST00000627587 SGTBQ96EQ0 304 aa8.6□□□□□ -1.03
PDLIM5-223ENST00000627587 SAMD8Q96LT4 415 aa8.6□□□□□ -1.03
PDLIM5-223ENST00000627587 Q96MT0 163 aa8.6□□□□□ -1.03
PDLIM5-223ENST00000627587 SMAD5Q99717 465 aaKnown RBP8.6□□□□□ -1.03
PDLIM5-223ENST00000627587 POLDIP3Q9BY77 421 aaKnown RBP8.6□□□□□ -1.03
PDLIM5-223ENST00000627587 CCDC90BQ9GZT6 254 aa8.6□□□□□ -1.03
PDLIM5-223ENST00000627587 PROK2Q9HC23 129 aa8.6□□□□□ -1.03
PDLIM5-223ENST00000627587 MCCC2Q9HCC0 563 aa8.6□□□□□ -1.03
PDLIM5-223ENST00000627587 TAS2R10Q9NYW0 307 aa8.6□□□□□ -1.03
PDLIM5-223ENST00000627587 PPP4R1LQ9P1A2 415 aa8.6□□□□□ -1.03
PDLIM5-223ENST00000627587 ERVK-18Q9QC07 812 aa8.6□□□□□ -1.03
PDLIM5-223ENST00000627587 PSORS1C1Q9UIG5 152 aa8.6□□□□□ -1.03
PDLIM5-223ENST00000627587 OSGIN1Q9UJX0 560 aa8.6□□□□□ -1.03
PDLIM5-223ENST00000627587 WIF1Q9Y5W5 379 aa8.6□□□□□ -1.03
PDLIM5-223ENST00000627587 SNX5Q9Y5X3 404 aa8.6□□□□□ -1.03
PDLIM5-223ENST00000627587 ICE1Q9Y2F5 2266 aa8.6□□□□□ -1.03
PDLIM5-223ENST00000627587 SPTAN1Q13813 2472 aaKnown RBP8.6□□□□□ -1.03
PDLIM5-223ENST00000627587 RP1L1Q8IWN7 2480 aaPredicted RBP8.6□□□□□ -1.03
PDLIM5-223ENST00000627587 IGLV3-32A0A0A0MS00 114 aa8.6□□□□□ -1.03
PDLIM5-223ENST00000627587 ANKUB1A6NFN9 424 aa8.6□□□□□ -1.03
PDLIM5-223ENST00000627587 IGF2P01344 180 aa8.6□□□□□ -1.03
PDLIM5-223ENST00000627587 SERPINA7P05543 415 aa8.6□□□□□ -1.03
PDLIM5-223ENST00000627587 CXCR1P25024 350 aa8.6□□□□□ -1.03
PDLIM5-223ENST00000627587 MSX1P28360 303 aa8.6□□□□□ -1.03
PDLIM5-223ENST00000627587 CASP3P42574 277 aa8.6□□□□□ -1.03
PDLIM5-223ENST00000627587 SLC9A3P48764 834 aa8.6□□□□□ -1.03
PDLIM5-223ENST00000627587 MLF1P58340 268 aa8.6□□□□□ -1.03
PDLIM5-223ENST00000627587 LTBQ06643 244 aa8.6□□□□□ -1.03
PDLIM5-223ENST00000627587 EIF2S3LQ2VIR3 472 aaKnown RBP8.6□□□□□ -1.03
PDLIM5-223ENST00000627587 PGGHGQ32M88 737 aa8.6□□□□□ -1.03
PDLIM5-223ENST00000627587 SLC25A30Q5SVS4 291 aa8.6□□□□□ -1.03
PDLIM5-223ENST00000627587 GTF2IRD2BQ6EKJ0 949 aa8.6□□□□□ -1.03
PDLIM5-223ENST00000627587 SMARCD3Q6STE5 483 aa8.6□□□□□ -1.03
PDLIM5-223ENST00000627587 KCTD8Q6ZWB6 473 aa8.6□□□□□ -1.03
PDLIM5-223ENST00000627587 GTF2IRD2Q86UP8 949 aa8.6□□□□□ -1.03
PDLIM5-223ENST00000627587 PLEKHA8Q96JA3 519 aa8.6□□□□□ -1.03
PDLIM5-223ENST00000627587 FER1L6-AS2Q96M78 137 aa8.6□□□□□ -1.03
PDLIM5-223ENST00000627587 FRMD6Q96NE9 622 aa8.6□□□□□ -1.03
PDLIM5-223ENST00000627587 MOGAT1Q96PD6 335 aa8.6□□□□□ -1.03
PDLIM5-223ENST00000627587 SECISBP2Q96T21 854 aaKnown RBP8.6□□□□□ -1.03
PDLIM5-223ENST00000627587 FAM192AQ9GZU8 254 aa8.6□□□□□ -1.03
PDLIM5-223ENST00000627587 UBQLN3Q9H347 655 aa8.6□□□□□ -1.03
PDLIM5-223ENST00000627587 GPR83Q9NYM4 423 aa8.6□□□□□ -1.03
PDLIM5-223ENST00000627587 MED12Q93074 2177 aa8.59□□□□□ -1.03
PDLIM5-223ENST00000627587 UTP20O75691 2785 aaKnown RBP8.59□□□□□ -1.03
PDLIM5-223ENST00000627587 TNRC6AQ8NDV7 1962 aaKnown RBP8.59□□□□□ -1.03
PDLIM5-223ENST00000627587 SMIM31A0A1B0GVY4 71 aa8.59□□□□□ -1.03
PDLIM5-223ENST00000627587 ZC3H12DA2A288 527 aaKnown RBP8.59□□□□□ -1.03
PDLIM5-223ENST00000627587 CLCA1A8K7I4 914 aa8.59□□□□□ -1.03
PDLIM5-223ENST00000627587 SURF4O15260 269 aa8.59□□□□□ -1.03
PDLIM5-223ENST00000627587 TLX2O43763 284 aaPredicted RBP8.59□□□□□ -1.03
PDLIM5-223ENST00000627587 MRPS14O60783 128 aaKnown RBP8.59□□□□□ -1.03
PDLIM5-223ENST00000627587 NPIPB7O75200 414 aa8.59□□□□□ -1.03
PDLIM5-223ENST00000627587 ENTPD6O75354 484 aa8.59□□□□□ -1.03
PDLIM5-223ENST00000627587 SLC25A12O75746 678 aa8.59□□□□□ -1.03
PDLIM5-223ENST00000627587 SLC2A10O95528 541 aa8.59□□□□□ -1.03
PDLIM5-223ENST00000627587 HMGN1P05114 100 aa8.59□□□□□ -1.03
PDLIM5-223ENST00000627587 ACVR2AP27037 513 aa8.59□□□□□ -1.03
PDLIM5-223ENST00000627587 HTR3AP46098 478 aa8.59□□□□□ -1.03
PDLIM5-223ENST00000627587 POLR2HP52434 150 aaKnown RBP8.59□□□□□ -1.03
PDLIM5-223ENST00000627587 DLX5P56178 289 aa8.59□□□□□ -1.03
PDLIM5-223ENST00000627587 RPS4XP62701 263 aaKnown RBP8.59□□□□□ -1.03
PDLIM5-223ENST00000627587 DBPQ10586 325 aaPredicted RBP8.59□□□□□ -1.03
PDLIM5-223ENST00000627587 PMS2P3Q13401 168 aa8.59□□□□□ -1.03
PDLIM5-223ENST00000627587 SNTA1Q13424 505 aa8.59□□□□□ -1.03
PDLIM5-223ENST00000627587 ATP1A4Q13733 1029 aa8.59□□□□□ -1.03
PDLIM5-223ENST00000627587 DOC2BQ14184 412 aa8.59□□□□□ -1.03
PDLIM5-223ENST00000627587 ZBED5Q49AG3 693 aa8.59□□□□□ -1.03
PDLIM5-223ENST00000627587 SYT14P1Q58G82 188 aa8.59□□□□□ -1.03
PDLIM5-223ENST00000627587 ZNF362Q5T0B9 420 aaPredicted RBP8.59□□□□□ -1.03
PDLIM5-223ENST00000627587 C1QL3Q5VWW1 255 aa8.59□□□□□ -1.03
PDLIM5-223ENST00000627587 MEDAGQ5VYS4 303 aa8.59□□□□□ -1.03
PDLIM5-223ENST00000627587 B3GNTL1Q67FW5 361 aaPredicted RBP8.59□□□□□ -1.03
PDLIM5-223ENST00000627587 TMEM81Q6P7N7 255 aa8.59□□□□□ -1.03
PDLIM5-223ENST00000627587 ARSKQ6UWY0 536 aa8.59□□□□□ -1.03
PDLIM5-223ENST00000627587 RTL4Q6ZR62 310 aa8.59□□□□□ -1.03
PDLIM5-223ENST00000627587 AHSA2Q719I0 299 aa8.59□□□□□ -1.03
PDLIM5-223ENST00000627587 GRINAQ7Z429 371 aa8.59□□□□□ -1.03
PDLIM5-223ENST00000627587 ZNF227Q86WZ6 799 aa8.59□□□□□ -1.03
PDLIM5-223ENST00000627587 ADGRG3Q86Y34 549 aa8.59□□□□□ -1.03
PDLIM5-223ENST00000627587 CYP4Z2PQ8N1L4 340 aa8.59□□□□□ -1.03
PDLIM5-223ENST00000627587 SLC43A2Q8N370 569 aa8.59□□□□□ -1.03
PDLIM5-223ENST00000627587 RBMXL3Q8N7X1 1067 aaKnown RBP8.59□□□□□ -1.03
PDLIM5-223ENST00000627587 FDCSPQ8NFU4 85 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms