RNA–Protein interactions for RNA: ENST00000622629.4

MSH6-215, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 4,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-215ENST00000622629 SELENOFO60613 162 aa11.86□□□□□ -0.51
MSH6-215ENST00000622629 RFPL3O75679 317 aa11.86□□□□□ -0.51
MSH6-215ENST00000622629 TFP02787 698 aa11.86□□□□□ -0.51
MSH6-215ENST00000622629 FOSL2P15408 326 aa11.86□□□□□ -0.51
MSH6-215ENST00000622629 VASH1Q7L8A9 365 aaPredicted RBP11.86□□□□□ -0.51
MSH6-215ENST00000622629 PLCZ1Q86YW0 608 aa11.86□□□□□ -0.51
MSH6-215ENST00000622629 RASGRP3Q8IV61 690 aa11.86□□□□□ -0.51
MSH6-215ENST00000622629 SIAH3Q8IW03 269 aa11.86□□□□□ -0.51
MSH6-215ENST00000622629 TDHQ8IZJ6 230 aa11.86□□□□□ -0.51
MSH6-215ENST00000622629 INTS14Q96SY0 518 aa11.86□□□□□ -0.51
MSH6-215ENST00000622629 CTRCQ99895 268 aa11.86□□□□□ -0.51
MSH6-215ENST00000622629 FGF20Q9NP95 211 aaPredicted RBP11.86□□□□□ -0.51
MSH6-215ENST00000622629 CMC2Q9NRP2 79 aa11.86□□□□□ -0.51
MSH6-215ENST00000622629 FKBP14Q9NWM8 211 aa11.86□□□□□ -0.51
MSH6-215ENST00000622629 SLC17A4Q9Y2C5 497 aa11.86□□□□□ -0.51
MSH6-215ENST00000622629 SPAG17Q6Q759 2223 aa11.86□□□□□ -0.51
MSH6-215ENST00000622629 A0A0B4J203 849 aa11.85□□□□□ -0.51
MSH6-215ENST00000622629 SOD1P00441 154 aa11.85□□□□□ -0.51
MSH6-215ENST00000622629 THBS1P07996 1170 aa11.85□□□□□ -0.51
MSH6-215ENST00000622629 PGAM2P15259 253 aa11.85□□□□□ -0.51
MSH6-215ENST00000622629 RBMS1P29558 406 aaKnown RBP11.85□□□□□ -0.51
MSH6-215ENST00000622629 GDNFP39905 211 aa11.85□□□□□ -0.51
MSH6-215ENST00000622629 EVX1P49640 407 aa11.85□□□□□ -0.51
MSH6-215ENST00000622629 GALEQ14376 348 aa11.85□□□□□ -0.51
MSH6-215ENST00000622629 OR7E24Q6IFN5 339 aa11.85□□□□□ -0.51
MSH6-215ENST00000622629 SLC18B1Q6NT16 456 aa11.85□□□□□ -0.51
MSH6-215ENST00000622629 MED25Q71SY5 747 aa11.85□□□□□ -0.51
MSH6-215ENST00000622629 OR8D4Q8NGM9 314 aa11.85□□□□□ -0.51
MSH6-215ENST00000622629 ADAMTS14Q8WXS8 1223 aa11.85□□□□□ -0.51
MSH6-215ENST00000622629 COX14Q96I36 57 aa11.85□□□□□ -0.51
MSH6-215ENST00000622629 REV1Q9UBZ9 1251 aa11.85□□□□□ -0.51
MSH6-215ENST00000622629 OR14I1A6ND48 311 aa11.85□□□□□ -0.51
MSH6-215ENST00000622629 DUX1O43812 170 aa11.85□□□□□ -0.51
MSH6-215ENST00000622629 ETV6P41212 452 aa11.85□□□□□ -0.51
MSH6-215ENST00000622629 ZNF41P51814 821 aaPredicted RBP11.85□□□□□ -0.51
MSH6-215ENST00000622629 CDK10Q15131 360 aa11.85□□□□□ -0.51
MSH6-215ENST00000622629 RAB11BQ15907 218 aa11.85□□□□□ -0.51
MSH6-215ENST00000622629 WBP2NLQ6ICG8 309 aa11.85□□□□□ -0.51
MSH6-215ENST00000622629 APOOLQ6UXV4 268 aa11.85□□□□□ -0.51
MSH6-215ENST00000622629 PRSS41Q7RTY9 318 aa11.85□□□□□ -0.51
MSH6-215ENST00000622629 UBE3DQ7Z6J8 389 aa11.85□□□□□ -0.51
MSH6-215ENST00000622629 NEK7Q8TDX7 302 aa11.85□□□□□ -0.51
MSH6-215ENST00000622629 ADAMTS18Q8TE60 1221 aa11.85□□□□□ -0.51
MSH6-215ENST00000622629 KIAA1143Q96AT1 154 aaPredicted RBP11.85□□□□□ -0.51
MSH6-215ENST00000622629 MRGPRX1Q96LB2 322 aa11.85□□□□□ -0.51
MSH6-215ENST00000622629 POTEKPQ9BYX7 375 aa11.85□□□□□ -0.51
MSH6-215ENST00000622629 LMAN1LQ9HAT1 526 aa11.85□□□□□ -0.51
MSH6-215ENST00000622629 PLSCR3Q9NRY6 295 aa11.85□□□□□ -0.51
MSH6-215ENST00000622629 NPAP1Q9NZP6 1156 aa11.85□□□□□ -0.51
MSH6-215ENST00000622629 LRIT1Q9P2V4 623 aa11.85□□□□□ -0.51
MSH6-215ENST00000622629 ZNF281Q9Y2X9 895 aa11.85□□□□□ -0.51
MSH6-215ENST00000622629 A0A0G2JMZ2 1700 aa11.85□□□□□ -0.51
MSH6-215ENST00000622629 ARPC5O15511 151 aa11.85□□□□□ -0.51
MSH6-215ENST00000622629 SRPX2O60687 465 aaPredicted RBP11.85□□□□□ -0.51
MSH6-215ENST00000622629 ITGA5P08648 1049 aa11.85□□□□□ -0.51
MSH6-215ENST00000622629 HIST1H1CP16403 213 aaKnown RBP11.85□□□□□ -0.51
MSH6-215ENST00000622629 PRSS3P35030 304 aa11.85□□□□□ -0.51
MSH6-215ENST00000622629 MRPS21P82921 87 aaKnown RBP11.85□□□□□ -0.51
MSH6-215ENST00000622629 CDK5Q00535 292 aa11.85□□□□□ -0.51
MSH6-215ENST00000622629 GALK2Q01415 458 aa11.85□□□□□ -0.51
MSH6-215ENST00000622629 OC90Q02509 493 aaPredicted RBP11.85□□□□□ -0.51
MSH6-215ENST00000622629 ZP2Q05996 745 aa11.85□□□□□ -0.51
MSH6-215ENST00000622629 SIRT6Q8N6T7 355 aa11.85□□□□□ -0.51
MSH6-215ENST00000622629 KIAA1958Q8N8K9 716 aa11.85□□□□□ -0.51
MSH6-215ENST00000622629 IL17RCQ8NAC3 791 aa11.85□□□□□ -0.51
MSH6-215ENST00000622629 GIMAP1Q8WWP7 306 aa11.85□□□□□ -0.51
MSH6-215ENST00000622629 ORAI1Q96D31 301 aa11.85□□□□□ -0.51
MSH6-215ENST00000622629 LMF2Q9BU23 707 aaKnown RBP11.85□□□□□ -0.51
MSH6-215ENST00000622629 OR2AT4A6NND4 320 aa11.85□□□□□ -0.51
MSH6-215ENST00000622629 ZNF264O43296 627 aa11.85□□□□□ -0.51
MSH6-215ENST00000622629 CTSVO60911 334 aa11.85□□□□□ -0.51
MSH6-215ENST00000622629 TCRBP04435 133 aa11.85□□□□□ -0.51
MSH6-215ENST00000622629 ALDOBP05062 364 aa11.85□□□□□ -0.51
MSH6-215ENST00000622629 TACR3P29371 465 aa11.85□□□□□ -0.51
MSH6-215ENST00000622629 RPS27P42677 84 aaKnown RBP11.85□□□□□ -0.51
MSH6-215ENST00000622629 GPR176Q14439 515 aa11.85□□□□□ -0.51
MSH6-215ENST00000622629 IL17RDQ8NFM7 739 aa11.85□□□□□ -0.51
MSH6-215ENST00000622629 RNASE11Q8TAA1 199 aaKnown RBP11.85□□□□□ -0.51
MSH6-215ENST00000622629 THRSPQ92748 146 aa11.85□□□□□ -0.51
MSH6-215ENST00000622629 DIO2Q92813 273 aa11.85□□□□□ -0.51
MSH6-215ENST00000622629 TMEM106AQ96A25 262 aa11.85□□□□□ -0.51
MSH6-215ENST00000622629 GON7Q9BXV9 100 aa11.85□□□□□ -0.51
MSH6-215ENST00000622629 SYT4Q9H2B2 425 aa11.85□□□□□ -0.51
MSH6-215ENST00000622629 FBXO34Q9NWN3 711 aa11.85□□□□□ -0.51
MSH6-215ENST00000622629 IL20Q9NYY1 176 aa11.85□□□□□ -0.51
MSH6-215ENST00000622629 PCYT1BQ9Y5K3 369 aaPredicted RBP11.85□□□□□ -0.51
MSH6-215ENST00000622629 FAM221BA6H8Z2 402 aa11.84□□□□□ -0.51
MSH6-215ENST00000622629 LINC01565O15544 149 aa11.84□□□□□ -0.51
MSH6-215ENST00000622629 DOK2O60496 412 aa11.84□□□□□ -0.51
MSH6-215ENST00000622629 DDOSTP39656 456 aa11.84□□□□□ -0.51
MSH6-215ENST00000622629 KIR2DL3P43628 341 aa11.84□□□□□ -0.51
MSH6-215ENST00000622629 DEFA5Q01523 94 aa11.84□□□□□ -0.51
MSH6-215ENST00000622629 NKPD1Q17RQ9 610 aa11.84□□□□□ -0.51
MSH6-215ENST00000622629 ZNF584Q8IVC4 421 aa11.84□□□□□ -0.51
MSH6-215ENST00000622629 ZNF595Q8IYB9 648 aa11.84□□□□□ -0.51
MSH6-215ENST00000622629 TMEM156Q8N614 296 aa11.84□□□□□ -0.51
MSH6-215ENST00000622629 BRIX1Q8TDN6 353 aaKnown RBP11.84□□□□□ -0.51
MSH6-215ENST00000622629 SENP5Q96HI0 755 aaPredicted RBP11.84□□□□□ -0.51
MSH6-215ENST00000622629 TSSK2Q96PF2 358 aa11.84□□□□□ -0.51
MSH6-215ENST00000622629 PLA2G2FQ9BZM2 168 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms