RNA–Protein interactions for RNA: ENST00000621399.1

CIRBP-245, Transcript of cold inducible RNA binding protein, humanhuman

TSL 1 (best)

Gene CIRBP, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-245ENST00000621399 FAM32AQ9Y421 112 aaKnown RBP16.58■□□□□ 0.24
CIRBP-245ENST00000621399 ENPP4Q9Y6X5 453 aa16.58■□□□□ 0.24
CIRBP-245ENST00000621399 PHF3Q92576 2039 aaKnown RBP16.58■□□□□ 0.24
CIRBP-245ENST00000621399 PTPN13Q12923 2485 aa16.58■□□□□ 0.24
CIRBP-245ENST00000621399 NKX2-6A6NCS4 301 aa16.57■□□□□ 0.24
CIRBP-245ENST00000621399 J3KTA2 159 aa16.57■□□□□ 0.24
CIRBP-245ENST00000621399 SS18L1O75177 396 aaPredicted RBP16.57■□□□□ 0.24
CIRBP-245ENST00000621399 TNFSF13O75888 250 aa16.57■□□□□ 0.24
CIRBP-245ENST00000621399 AKR7A3O95154 331 aa16.57■□□□□ 0.24
CIRBP-245ENST00000621399 GTF2E2P29084 291 aaKnown RBP16.57■□□□□ 0.24
CIRBP-245ENST00000621399 KIR2DL2P43627 348 aaPredicted RBP16.57■□□□□ 0.24
CIRBP-245ENST00000621399 H3F3AP84243 136 aa16.57■□□□□ 0.24
CIRBP-245ENST00000621399 TRAP1Q12931 704 aaKnown RBP16.57■□□□□ 0.24
CIRBP-245ENST00000621399 OTUD3Q5T2D3 398 aaPredicted RBP16.57■□□□□ 0.24
CIRBP-245ENST00000621399 FAM69AQ5T7M9 428 aa16.57■□□□□ 0.24
CIRBP-245ENST00000621399 PAQR6Q6TCH4 344 aa16.57■□□□□ 0.24
CIRBP-245ENST00000621399 NKAIN4Q8IVV8 208 aa16.57■□□□□ 0.24
CIRBP-245ENST00000621399 CCDC103Q8IW40 242 aa16.57■□□□□ 0.24
CIRBP-245ENST00000621399 C10orf53Q8N6V4 93 aa16.57■□□□□ 0.24
CIRBP-245ENST00000621399 PIGXQ8TBF5 258 aa16.57■□□□□ 0.24
CIRBP-245ENST00000621399 C7orf34Q96L11 122 aa16.57■□□□□ 0.24
CIRBP-245ENST00000621399 PSMG3-AS1Q96PY0 264 aa16.57■□□□□ 0.24
CIRBP-245ENST00000621399 PRSS27Q9BQR3 290 aa16.57■□□□□ 0.24
CIRBP-245ENST00000621399 GP6Q9HCN6 339 aa16.57■□□□□ 0.24
CIRBP-245ENST00000621399 KLHL13Q9P2N7 655 aa16.57■□□□□ 0.24
CIRBP-245ENST00000621399 COL12A1Q99715 3063 aa16.56■□□□□ 0.24
CIRBP-245ENST00000621399 ZNF814B7Z6K7 855 aa16.56■□□□□ 0.24
CIRBP-245ENST00000621399 EEF1E1-BLOC1S5C9J1V9 151 aa16.56■□□□□ 0.24
CIRBP-245ENST00000621399 FTCDNL1E5RQL4 147 aa16.56■□□□□ 0.24
CIRBP-245ENST00000621399 hCG_2039718K7EN88 272 aa16.56■□□□□ 0.24
CIRBP-245ENST00000621399 KPNA4O00629 521 aaPredicted RBP16.56■□□□□ 0.24
CIRBP-245ENST00000621399 ACOT8O14734 319 aa16.56■□□□□ 0.24
CIRBP-245ENST00000621399 FFAR1O14842 300 aa16.56■□□□□ 0.24
CIRBP-245ENST00000621399 EEF1E1O43324 174 aaKnown RBP16.56■□□□□ 0.24
CIRBP-245ENST00000621399 CLDN1O95832 211 aa16.56■□□□□ 0.24
CIRBP-245ENST00000621399 YES1P07947 543 aa16.56■□□□□ 0.24
CIRBP-245ENST00000621399 ITGA2P17301 1181 aa16.56■□□□□ 0.24
CIRBP-245ENST00000621399 GUSBP1Q15486 140 aa16.56■□□□□ 0.24
CIRBP-245ENST00000621399 TMEM201Q5SNT2 666 aa16.56■□□□□ 0.24
CIRBP-245ENST00000621399 ABLIM2Q6H8Q1 611 aa16.56■□□□□ 0.24
CIRBP-245ENST00000621399 VWA1Q6PCB0 445 aa16.56■□□□□ 0.24
CIRBP-245ENST00000621399 TSEN54Q7Z6J9 526 aaKnown RBP16.56■□□□□ 0.24
CIRBP-245ENST00000621399 TUSC5Q8IXB3 177 aa16.56■□□□□ 0.24
CIRBP-245ENST00000621399 OFCC1Q8IZS5 231 aa16.56■□□□□ 0.24
CIRBP-245ENST00000621399 TMEM99Q8N816 258 aa16.56■□□□□ 0.24
CIRBP-245ENST00000621399 RELL2Q8NC24 303 aaPredicted RBP16.56■□□□□ 0.24
CIRBP-245ENST00000621399 OR6S1Q8NH40 331 aa16.56■□□□□ 0.24
CIRBP-245ENST00000621399 TMEM255BQ8WV15 326 aa16.56■□□□□ 0.24
CIRBP-245ENST00000621399 STARD4Q96DR4 205 aa16.56■□□□□ 0.24
CIRBP-245ENST00000621399 SEPHS2Q99611 448 aa16.56■□□□□ 0.24
CIRBP-245ENST00000621399 PSD2Q9BQI7 771 aa16.56■□□□□ 0.24
CIRBP-245ENST00000621399 SLC19A3Q9BZV2 496 aa16.56■□□□□ 0.24
CIRBP-245ENST00000621399 TRIM15Q9C019 465 aa16.56■□□□□ 0.24
CIRBP-245ENST00000621399 LRMDAQ9H2I8 198 aa16.56■□□□□ 0.24
CIRBP-245ENST00000621399 PIGMQ9H3S5 423 aa16.56■□□□□ 0.24
CIRBP-245ENST00000621399 NDUFAF4Q9P032 175 aa16.56■□□□□ 0.24
CIRBP-245ENST00000621399 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.56■□□□□ 0.24
CIRBP-245ENST00000621399 C6orf203Q9P0P8 240 aaPredicted RBP16.56■□□□□ 0.24
CIRBP-245ENST00000621399 KLF2Q9Y5W3 355 aaPredicted RBP16.56■□□□□ 0.24
CIRBP-245ENST00000621399 PCNX1Q96RV3 2341 aa16.56■□□□□ 0.24
CIRBP-245ENST00000621399 NCOA6Q14686 2063 aaPredicted RBP16.55■□□□□ 0.24
CIRBP-245ENST00000621399 TCRBV5S2A0A599 114 aa16.55■□□□□ 0.24
CIRBP-245ENST00000621399 RAMP1O60894 148 aa16.55■□□□□ 0.24
CIRBP-245ENST00000621399 SMNDC1O75940 238 aaKnown RBP eCLIP16.55■□□□□ 0.242e-20■■■□□ 16.3
CIRBP-245ENST00000621399 SEMG1P04279 462 aa16.55■□□□□ 0.24
CIRBP-245ENST00000621399 CBLP22681 906 aa16.55■□□□□ 0.24
CIRBP-245ENST00000621399 AGTR1P30556 359 aa16.55■□□□□ 0.24
CIRBP-245ENST00000621399 RBM34P42696 430 aaKnown RBP16.55■□□□□ 0.24
CIRBP-245ENST00000621399 VLDLRP98155 873 aa16.55■□□□□ 0.24
CIRBP-245ENST00000621399 MFSD13AQ14CX5 517 aa16.55■□□□□ 0.24
CIRBP-245ENST00000621399 TRAM2Q15035 370 aa16.55■□□□□ 0.24
CIRBP-245ENST00000621399 PDK3Q15120 406 aa16.55■□□□□ 0.24
CIRBP-245ENST00000621399 TMEM225Q6GV28 225 aa16.55■□□□□ 0.24
CIRBP-245ENST00000621399 MAMDC2Q7Z304 686 aaPredicted RBP16.55■□□□□ 0.24
CIRBP-245ENST00000621399 BTLAQ7Z6A9 289 aa16.55■□□□□ 0.24
CIRBP-245ENST00000621399 OR6K3Q8NGY3 331 aa16.55■□□□□ 0.24
CIRBP-245ENST00000621399 TMEM239Q8WW34 195 aa16.55■□□□□ 0.24
CIRBP-245ENST00000621399 POP5Q969H6 163 aaKnown RBP16.55■□□□□ 0.24
CIRBP-245ENST00000621399 ZNF775Q96BV0 537 aaPredicted RBP16.55■□□□□ 0.24
CIRBP-245ENST00000621399 HS6ST2Q96MM7 605 aa16.55■□□□□ 0.24
CIRBP-245ENST00000621399 ZNF300Q96RE9 604 aaPredicted RBP16.55■□□□□ 0.24
CIRBP-245ENST00000621399 TACO1Q9BSH4 297 aaKnown RBP16.55■□□□□ 0.24
CIRBP-245ENST00000621399 ZNF426Q9BUY5 554 aa16.55■□□□□ 0.24
CIRBP-245ENST00000621399 ING1Q9UK53 422 aaPredicted RBP16.55■□□□□ 0.24
CIRBP-245ENST00000621399 PROCRQ9UNN8 238 aa16.55■□□□□ 0.24
CIRBP-245ENST00000621399 USP9YO00507 2555 aaPredicted RBP16.55■□□□□ 0.24
CIRBP-245ENST00000621399 ARHGAP21Q5T5U3 1957 aa16.55■□□□□ 0.24
CIRBP-245ENST00000621399 UTP20O75691 2785 aaKnown RBP16.55■□□□□ 0.24
CIRBP-245ENST00000621399 AQP7P3A6NL99 342 aa16.54■□□□□ 0.24
CIRBP-245ENST00000621399 PRSS44E7EML9 344 aa16.54■□□□□ 0.24
CIRBP-245ENST00000621399 FABP3P05413 133 aa16.54■□□□□ 0.24
CIRBP-245ENST00000621399 RHCEP18577 417 aa16.54■□□□□ 0.24
CIRBP-245ENST00000621399 GRPRP30550 384 aa16.54■□□□□ 0.24
CIRBP-245ENST00000621399 LUZP2Q86TE4 346 aa16.54■□□□□ 0.24
CIRBP-245ENST00000621399 ASPNQ9BXN1 380 aa16.54■□□□□ 0.24
CIRBP-245ENST00000621399 KLHL4Q9C0H6 718 aa16.54■□□□□ 0.24
CIRBP-245ENST00000621399 MMADHCQ9H3L0 296 aaPredicted RBP16.54■□□□□ 0.24
CIRBP-245ENST00000621399 C12orf49Q9H741 205 aa16.54■□□□□ 0.24
CIRBP-245ENST00000621399 NMNAT1Q9HAN9 279 aaPredicted RBP16.54■□□□□ 0.24
CIRBP-245ENST00000621399 BCO1Q9HAY6 547 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 101.4 ms