RNA–Protein interactions for RNA: ENST00000620786.4

CLIP1-219, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CLIP1, Length 5,913 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-219ENST00000620786 SLC7A13Q8TCU3 470 aa10.55□□□□□ -0.72
CLIP1-219ENST00000620786 TMEM174Q8WUU8 243 aa10.55□□□□□ -0.72
CLIP1-219ENST00000620786 EBF1Q9UH73 591 aa10.55□□□□□ -0.72
CLIP1-219ENST00000620786 V9GY05 133 aa10.55□□□□□ -0.72
CLIP1-219ENST00000620786 TRBV4-1A0A0J9YWV2 114 aa10.55□□□□□ -0.72
CLIP1-219ENST00000620786 A0A1W2PPH5 198 aa10.55□□□□□ -0.72
CLIP1-219ENST00000620786 A0A1W2PQ09 198 aa10.55□□□□□ -0.72
CLIP1-219ENST00000620786 IFNA17P01571 189 aa10.55□□□□□ -0.72
CLIP1-219ENST00000620786 CAPNS1P04632 268 aa10.55□□□□□ -0.72
CLIP1-219ENST00000620786 TP53P04637 393 aaPredicted RBP10.55□□□□□ -0.72
CLIP1-219ENST00000620786 NUDT7P0C024 238 aa10.55□□□□□ -0.72
CLIP1-219ENST00000620786 CCSMST1Q4G0I0 132 aa10.55□□□□□ -0.72
CLIP1-219ENST00000620786 SLC35D2Q76EJ3 337 aa10.55□□□□□ -0.72
CLIP1-219ENST00000620786 COX15Q7KZN9 410 aa10.55□□□□□ -0.72
CLIP1-219ENST00000620786 FGF14Q92915 247 aa10.55□□□□□ -0.72
CLIP1-219ENST00000620786 NRSN2Q9GZP1 204 aa10.55□□□□□ -0.72
CLIP1-219ENST00000620786 SDHAF2Q9NX18 166 aa10.55□□□□□ -0.72
CLIP1-219ENST00000620786 GLI3P10071 1580 aa10.54□□□□□ -0.72
CLIP1-219ENST00000620786 B3GALT4O96024 378 aa10.54□□□□□ -0.72
CLIP1-219ENST00000620786 PPP5CP53041 499 aa10.54□□□□□ -0.72
CLIP1-219ENST00000620786 RRAS2P62070 204 aaPredicted RBP10.54□□□□□ -0.72
CLIP1-219ENST00000620786 MPEG1Q2M385 716 aa10.54□□□□□ -0.72
CLIP1-219ENST00000620786 ABHD17CQ6PCB6 329 aa10.54□□□□□ -0.72
CLIP1-219ENST00000620786 KANSL1Q7Z3B3 1105 aa10.54□□□□□ -0.72
CLIP1-219ENST00000620786 KCTD20Q7Z5Y7 419 aa10.54□□□□□ -0.72
CLIP1-219ENST00000620786 LINC01465Q8N7H1 131 aa10.54□□□□□ -0.72
CLIP1-219ENST00000620786 IP6K3Q96PC2 410 aa10.54□□□□□ -0.72
CLIP1-219ENST00000620786 ELF4Q99607 663 aaPredicted RBP10.54□□□□□ -0.72
CLIP1-219ENST00000620786 CCDC32Q9BV29 185 aa10.54□□□□□ -0.72
CLIP1-219ENST00000620786 FAIMQ9NVQ4 179 aa10.54□□□□□ -0.72
CLIP1-219ENST00000620786 WBP1LQ9NX94 342 aa10.54□□□□□ -0.72
CLIP1-219ENST00000620786 MYOTQ9UBF9 498 aa10.54□□□□□ -0.72
CLIP1-219ENST00000620786 ENPP5Q9UJA9 477 aa10.54□□□□□ -0.72
CLIP1-219ENST00000620786 PRAMEF27A3QJZ7 478 aa10.54□□□□□ -0.72
CLIP1-219ENST00000620786 POM121BA6NF01 834 aa10.54□□□□□ -0.72
CLIP1-219ENST00000620786 PLRG1O43660 514 aaKnown RBP10.54□□□□□ -0.72
CLIP1-219ENST00000620786 DRD5P21918 477 aa10.54□□□□□ -0.72
CLIP1-219ENST00000620786 GPR85P60893 370 aa10.54□□□□□ -0.72
CLIP1-219ENST00000620786 PPP2CBP62714 309 aa10.54□□□□□ -0.72
CLIP1-219ENST00000620786 PPIAP62937 165 aaKnown RBP10.54□□□□□ -0.72
CLIP1-219ENST00000620786 PPP2CAP67775 309 aa10.54□□□□□ -0.72
CLIP1-219ENST00000620786 SELPLGQ14242 412 aa10.54□□□□□ -0.72
CLIP1-219ENST00000620786 PRAMEF9Q5VWM5 478 aa10.54□□□□□ -0.72
CLIP1-219ENST00000620786 OR4D6Q8NGJ1 314 aa10.54□□□□□ -0.72
CLIP1-219ENST00000620786 RNF128Q8TEB7 428 aa10.54□□□□□ -0.72
CLIP1-219ENST00000620786 CMSS1Q9BQ75 279 aaKnown RBP10.54□□□□□ -0.72
CLIP1-219ENST00000620786 DHRS4Q9BTZ2 278 aa10.54□□□□□ -0.72
CLIP1-219ENST00000620786 GLIPR2Q9H4G4 154 aa10.54□□□□□ -0.72
CLIP1-219ENST00000620786 LYRM4Q9HD34 91 aa10.54□□□□□ -0.72
CLIP1-219ENST00000620786 TBCCD1Q9NVR7 557 aa10.54□□□□□ -0.72
CLIP1-219ENST00000620786 GPR171O14626 319 aa10.54□□□□□ -0.72
CLIP1-219ENST00000620786 PTGER4P35408 488 aa10.54□□□□□ -0.72
CLIP1-219ENST00000620786 LHX8Q68G74 356 aa10.54□□□□□ -0.72
CLIP1-219ENST00000620786 FBXW12Q6X9E4 464 aa10.54□□□□□ -0.72
CLIP1-219ENST00000620786 YRDCQ86U90 279 aaKnown RBP10.54□□□□□ -0.72
CLIP1-219ENST00000620786 FAM83FQ8NEG4 500 aaPredicted RBP10.54□□□□□ -0.72
CLIP1-219ENST00000620786 FNDC8Q8TC99 324 aa10.54□□□□□ -0.72
CLIP1-219ENST00000620786 SLC38A5Q8WUX1 472 aa10.54□□□□□ -0.72
CLIP1-219ENST00000620786 PATE1Q8WXA2 126 aa10.54□□□□□ -0.72
CLIP1-219ENST00000620786 DCUN1D4Q92564 292 aa10.54□□□□□ -0.72
CLIP1-219ENST00000620786 GTF2H4Q92759 462 aa10.54□□□□□ -0.72
CLIP1-219ENST00000620786 MED20Q9H944 212 aa10.54□□□□□ -0.72
CLIP1-219ENST00000620786 ZNF286AQ9HBT8 521 aa10.54□□□□□ -0.72
CLIP1-219ENST00000620786 NRG2O14511 850 aaPredicted RBP10.54□□□□□ -0.72
CLIP1-219ENST00000620786 PTAFRP25105 342 aa10.54□□□□□ -0.72
CLIP1-219ENST00000620786 STT3AP46977 705 aa10.54□□□□□ -0.72
CLIP1-219ENST00000620786 KIF18BQ86Y91 864 aa10.54□□□□□ -0.72
CLIP1-219ENST00000620786 SCCPDHQ8NBX0 429 aa10.54□□□□□ -0.72
CLIP1-219ENST00000620786 DMBX1Q8NFW5 382 aa10.54□□□□□ -0.72
CLIP1-219ENST00000620786 OR8J2Q8NGG1 315 aa10.54□□□□□ -0.72
CLIP1-219ENST00000620786 TNFRSF13CQ96RJ3 184 aa10.54□□□□□ -0.72
CLIP1-219ENST00000620786 ZNF696Q9H7X3 374 aa10.54□□□□□ -0.72
CLIP1-219ENST00000620786 TMEM100Q9NV29 134 aa10.54□□□□□ -0.72
CLIP1-219ENST00000620786 SURF4O15260 269 aa10.54□□□□□ -0.72
CLIP1-219ENST00000620786 BCAS1O75363 584 aaPredicted RBP10.54□□□□□ -0.72
CLIP1-219ENST00000620786 ITGB4P16144 1822 aa10.54□□□□□ -0.72
CLIP1-219ENST00000620786 NR4A2P43354 598 aa10.54□□□□□ -0.72
CLIP1-219ENST00000620786 PFN3P60673 137 aa10.54□□□□□ -0.72
CLIP1-219ENST00000620786 RAB4BP61018 213 aa10.54□□□□□ -0.72
CLIP1-219ENST00000620786 MFAP5Q13361 173 aa10.54□□□□□ -0.72
CLIP1-219ENST00000620786 ESPNLQ6ZVH7 1005 aa10.54□□□□□ -0.72
CLIP1-219ENST00000620786 SULF2Q8IWU5 870 aa10.54□□□□□ -0.72
CLIP1-219ENST00000620786 L3MBTL4Q8NA19 623 aa10.54□□□□□ -0.72
CLIP1-219ENST00000620786 OR2T11Q8NH01 316 aa10.54□□□□□ -0.72
CLIP1-219ENST00000620786 NICN1Q9BSH3 213 aa10.54□□□□□ -0.72
CLIP1-219ENST00000620786 PBDC1Q9BVG4 233 aa10.54□□□□□ -0.72
CLIP1-219ENST00000620786 KLF13Q9Y2Y9 288 aaPredicted RBP10.54□□□□□ -0.72
CLIP1-219ENST00000620786 ATG4BQ9Y4P1 393 aa10.54□□□□□ -0.72
CLIP1-219ENST00000620786 TRGV8A0A0C4DH27 118 aa10.53□□□□□ -0.72
CLIP1-219ENST00000620786 TSFMP43897 325 aaKnown RBP10.53□□□□□ -0.72
CLIP1-219ENST00000620786 RPL23AP62750 156 aaKnown RBP10.53□□□□□ -0.72
CLIP1-219ENST00000620786 TSPAN31Q12999 210 aa10.53□□□□□ -0.72
CLIP1-219ENST00000620786 ZNF836Q6ZNA1 936 aa10.53□□□□□ -0.72
CLIP1-219ENST00000620786 MBOAT2Q6ZWT7 520 aa10.53□□□□□ -0.72
CLIP1-219ENST00000620786 OR4F15Q8NGB8 312 aa10.53□□□□□ -0.72
CLIP1-219ENST00000620786 TAAR8Q969N4 342 aa10.53□□□□□ -0.72
CLIP1-219ENST00000620786 TIMD4Q96H15 378 aa10.53□□□□□ -0.72
CLIP1-219ENST00000620786 CXorf36Q9H7Y0 433 aa10.53□□□□□ -0.72
CLIP1-219ENST00000620786 GCM1Q9NP62 436 aa10.53□□□□□ -0.72
CLIP1-219ENST00000620786 MUTYHQ9UIF7 546 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms