RNA–Protein interactions for RNA: ENST00000620675.4

NEK3-210, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-210ENST00000620675 GCNT2Q8N0V5 402 aa12.19□□□□□ -0.46
NEK3-210ENST00000620675 KDM8Q8N371 416 aa12.19□□□□□ -0.46
NEK3-210ENST00000620675 OR4C15Q8NGM1 316 aa12.19□□□□□ -0.46
NEK3-210ENST00000620675 ABHD3Q8WU67 409 aa12.19□□□□□ -0.46
NEK3-210ENST00000620675 LRTOMTQ8WZ04 291 aa12.19□□□□□ -0.46
NEK3-210ENST00000620675 ZNF775Q96BV0 537 aaPredicted RBP12.19□□□□□ -0.46
NEK3-210ENST00000620675 DUS3LQ96G46 650 aaKnown RBP12.19□□□□□ -0.46
NEK3-210ENST00000620675 GPA33Q99795 319 aa12.19□□□□□ -0.46
NEK3-210ENST00000620675 TP63Q9H3D4 680 aaPredicted RBP12.19□□□□□ -0.46
NEK3-210ENST00000620675 NTN4Q9HB63 628 aa12.19□□□□□ -0.46
NEK3-210ENST00000620675 KLHL13Q9P2N7 655 aa12.19□□□□□ -0.46
NEK3-210ENST00000620675 AP4S1Q9Y587 144 aa12.19□□□□□ -0.46
NEK3-210ENST00000620675 MAGED1Q9Y5V3 778 aaPredicted RBP12.19□□□□□ -0.46
NEK3-210ENST00000620675 USP9YO00507 2555 aaPredicted RBP12.19□□□□□ -0.46
NEK3-210ENST00000620675 ICE1Q9Y2F5 2266 aa12.19□□□□□ -0.46
NEK3-210ENST00000620675 TRAV36DV7A0A075B6V5 113 aa12.18□□□□□ -0.46
NEK3-210ENST00000620675 FIGNL2A6NMB9 653 aa12.18□□□□□ -0.46
NEK3-210ENST00000620675 CCL21O00585 134 aa12.18□□□□□ -0.46
NEK3-210ENST00000620675 LRRTM2O43300 516 aa12.18□□□□□ -0.46
NEK3-210ENST00000620675 WDR1O75083 606 aa12.18□□□□□ -0.46
NEK3-210ENST00000620675 AHSA1O95433 338 aa12.18□□□□□ -0.46
NEK3-210ENST00000620675 PMS2P2O95744 297 aa12.18□□□□□ -0.46
NEK3-210ENST00000620675 P2RY4P51582 365 aa12.18□□□□□ -0.46
NEK3-210ENST00000620675 NUP107P57740 925 aa12.18□□□□□ -0.46
NEK3-210ENST00000620675 PMPCAQ10713 525 aa12.18□□□□□ -0.46
NEK3-210ENST00000620675 B3GNT6Q6ZMB0 384 aa12.18□□□□□ -0.46
NEK3-210ENST00000620675 ZNF730Q6ZMV8 503 aa12.18□□□□□ -0.46
NEK3-210ENST00000620675 ZNF771Q7L3S4 317 aaPredicted RBP12.18□□□□□ -0.46
NEK3-210ENST00000620675 AMIGO2Q86SJ2 522 aa12.18□□□□□ -0.46
NEK3-210ENST00000620675 ATCAYQ86WG3 371 aa12.18□□□□□ -0.46
NEK3-210ENST00000620675 OR9Q2Q8NGE9 314 aa12.18□□□□□ -0.46
NEK3-210ENST00000620675 ACOT11Q8WXI4 607 aaPredicted RBP12.18□□□□□ -0.46
NEK3-210ENST00000620675 ALPK1Q96QP1 1244 aa12.18□□□□□ -0.46
NEK3-210ENST00000620675 DMRTA2Q96SC8 542 aa12.18□□□□□ -0.46
NEK3-210ENST00000620675 ZNF347Q96SE7 839 aa12.18□□□□□ -0.46
NEK3-210ENST00000620675 TTYH2Q9BSA4 534 aa12.18□□□□□ -0.46
NEK3-210ENST00000620675 STOML1Q9UBI4 398 aa12.18□□□□□ -0.46
NEK3-210ENST00000620675 ING1Q9UK53 422 aaPredicted RBP12.18□□□□□ -0.46
NEK3-210ENST00000620675 PRDM4Q9UKN5 801 aa12.18□□□□□ -0.46
NEK3-210ENST00000620675 CRYBG3Q68DQ2 2970 aa12.18□□□□□ -0.46
NEK3-210ENST00000620675 SH3PXD2BA1X283 911 aa12.18□□□□□ -0.46
NEK3-210ENST00000620675 SLC22A20A6NK97 555 aa12.18□□□□□ -0.46
NEK3-210ENST00000620675 M0R082 166 aa12.18□□□□□ -0.46
NEK3-210ENST00000620675 CDC42EP2O14613 210 aa12.18□□□□□ -0.46
NEK3-210ENST00000620675 KRT36O76013 467 aa12.18□□□□□ -0.46
NEK3-210ENST00000620675 GRPRP30550 384 aa12.18□□□□□ -0.46
NEK3-210ENST00000620675 GPR4P46093 362 aa12.18□□□□□ -0.46
NEK3-210ENST00000620675 CLK1P49759 484 aaKnown RBP12.18□□□□□ -0.46
NEK3-210ENST00000620675 MAP2K6P52564 334 aa12.18□□□□□ -0.46
NEK3-210ENST00000620675 AGFG1P52594 562 aaKnown RBP12.18□□□□□ -0.46
NEK3-210ENST00000620675 RPS3AP61247 264 aaKnown RBP12.18□□□□□ -0.46
NEK3-210ENST00000620675 H3F3AP84243 136 aa12.18□□□□□ -0.46
NEK3-210ENST00000620675 FOXF2Q12947 444 aa12.18□□□□□ -0.46
NEK3-210ENST00000620675 ZNF74Q16587 644 aa12.18□□□□□ -0.46
NEK3-210ENST00000620675 FAM69AQ5T7M9 428 aa12.18□□□□□ -0.46
NEK3-210ENST00000620675 NSUN5P2Q63ZY6 315 aa12.18□□□□□ -0.46
NEK3-210ENST00000620675 C10orf53Q8N6V4 93 aa12.18□□□□□ -0.46
NEK3-210ENST00000620675 OR4K5Q8NGD3 323 aa12.18□□□□□ -0.46
NEK3-210ENST00000620675 ZNF417Q8TAU3 575 aa12.18□□□□□ -0.46
NEK3-210ENST00000620675 FAM46AQ96IP4 442 aaKnown RBP12.18□□□□□ -0.46
NEK3-210ENST00000620675 ZNF587Q96SQ5 575 aaPredicted RBP12.18□□□□□ -0.46
NEK3-210ENST00000620675 ARMC1Q9NVT9 282 aa12.18□□□□□ -0.46
NEK3-210ENST00000620675 MEMO1Q9Y316 297 aa12.18□□□□□ -0.46
NEK3-210ENST00000620675 TNFRSF11BO00300 401 aa12.17□□□□□ -0.46
NEK3-210ENST00000620675 RNF224P0DH78 156 aa12.17□□□□□ -0.46
NEK3-210ENST00000620675 IFI30P13284 250 aa12.17□□□□□ -0.46
NEK3-210ENST00000620675 RBM34P42696 430 aaKnown RBP12.17□□□□□ -0.46
NEK3-210ENST00000620675 SRSF1Q07955 248 aaKnown RBP eCLIP12.17□□□□□ -0.46
NEK3-210ENST00000620675 CDSNQ15517 529 aa12.17□□□□□ -0.46
NEK3-210ENST00000620675 MBOAT2Q6ZWT7 520 aa12.17□□□□□ -0.46
NEK3-210ENST00000620675 CHMP1BQ7LBR1 199 aa12.17□□□□□ -0.46
NEK3-210ENST00000620675 MFSD8Q8NHS3 518 aa12.17□□□□□ -0.46
NEK3-210ENST00000620675 SEMA6AQ9H2E6 1030 aa12.17□□□□□ -0.46
NEK3-210ENST00000620675 ERRFI1Q9UJM3 462 aaPredicted RBP12.17□□□□□ -0.46
NEK3-210ENST00000620675 TRAPPC4Q9Y296 219 aa12.17□□□□□ -0.46
NEK3-210ENST00000620675 MED31Q9Y3C7 131 aa12.17□□□□□ -0.46
NEK3-210ENST00000620675 SAMHD1Q9Y3Z3 626 aaKnown RBP12.17□□□□□ -0.46
NEK3-210ENST00000620675 CENPEQ02224 2701 aa12.17□□□□□ -0.46
NEK3-210ENST00000620675 CLOCKO15516 846 aa12.17□□□□□ -0.46
NEK3-210ENST00000620675 HPRP00739 348 aa12.17□□□□□ -0.46
NEK3-210ENST00000620675 GABRA1P14867 456 aa12.17□□□□□ -0.46
NEK3-210ENST00000620675 IFNA8P32881 189 aa12.17□□□□□ -0.46
NEK3-210ENST00000620675 HMGA2P52926 109 aa12.17□□□□□ -0.46
NEK3-210ENST00000620675 ADORA2A-AS1P86434 159 aa12.17□□□□□ -0.46
NEK3-210ENST00000620675 FHL1Q13642 323 aa12.17□□□□□ -0.46
NEK3-210ENST00000620675 FCRLAQ7L513 359 aa12.17□□□□□ -0.46
NEK3-210ENST00000620675 ZER1Q7Z7L7 766 aa12.17□□□□□ -0.46
NEK3-210ENST00000620675 CCDC71Q8IV32 467 aaPredicted RBP12.17□□□□□ -0.46
NEK3-210ENST00000620675 WDFY1Q8IWB7 410 aa12.17□□□□□ -0.46
NEK3-210ENST00000620675 RNF128Q8TEB7 428 aa12.17□□□□□ -0.46
NEK3-210ENST00000620675 CPNE4Q96A23 557 aaPredicted RBP12.17□□□□□ -0.46
NEK3-210ENST00000620675 BPIFA2Q96DR5 249 aa12.17□□□□□ -0.46
NEK3-210ENST00000620675 PKP2Q99959 881 aa12.17□□□□□ -0.46
NEK3-210ENST00000620675 CALHM2Q9HA72 323 aa12.17□□□□□ -0.46
NEK3-210ENST00000620675 MBD3L4A6NDZ8 208 aaPredicted RBP12.16□□□□□ -0.46
NEK3-210ENST00000620675 MBD3L3A6NE82 208 aaPredicted RBP12.16□□□□□ -0.46
NEK3-210ENST00000620675 MBD3L5A6NJ08 208 aaPredicted RBP12.16□□□□□ -0.46
NEK3-210ENST00000620675 CD8B2A6NJW9 211 aa12.16□□□□□ -0.46
NEK3-210ENST00000620675 E9PLN8 166 aa12.16□□□□□ -0.46
NEK3-210ENST00000620675 HLA-DOBP13765 273 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms