RNA–Protein interactions for RNA: ENST00000619079.1

UPF3A-212, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF3A, Length 2,423 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-212ENST00000619079 PPIAP62937 165 aaKnown RBP9.97□□□□□ -0.81
UPF3A-212ENST00000619079 UBE2IP63279 158 aaKnown RBP9.97□□□□□ -0.81
UPF3A-212ENST00000619079 MEF2AQ02078 507 aaPredicted RBP9.97□□□□□ -0.81
UPF3A-212ENST00000619079 OC90Q02509 493 aaPredicted RBP9.97□□□□□ -0.81
UPF3A-212ENST00000619079 CDK5R1Q15078 307 aa9.97□□□□□ -0.81
UPF3A-212ENST00000619079 TEAD2Q15562 447 aa9.97□□□□□ -0.81
UPF3A-212ENST00000619079 C10orf91Q5T1B1 145 aa9.97□□□□□ -0.81
UPF3A-212ENST00000619079 RPTNQ6XPR3 784 aa9.97□□□□□ -0.81
UPF3A-212ENST00000619079 GAREM2Q75VX8 874 aa9.97□□□□□ -0.81
UPF3A-212ENST00000619079 CBLN2Q8IUK8 224 aa9.97□□□□□ -0.81
UPF3A-212ENST00000619079 SFXN5Q8TD22 340 aa9.97□□□□□ -0.81
UPF3A-212ENST00000619079 TEAD3Q99594 435 aa9.97□□□□□ -0.81
UPF3A-212ENST00000619079 CMSS1Q9BQ75 279 aaKnown RBP9.97□□□□□ -0.81
UPF3A-212ENST00000619079 HAO2Q9NYQ3 351 aa9.97□□□□□ -0.81
UPF3A-212ENST00000619079 B4GALT6Q9UBX8 382 aa9.97□□□□□ -0.81
UPF3A-212ENST00000619079 ZNF629Q9UEG4 869 aaPredicted RBP9.97□□□□□ -0.81
UPF3A-212ENST00000619079 PRKAB1Q9Y478 270 aa9.97□□□□□ -0.81
UPF3A-212ENST00000619079 ANTXRLA6NF34 631 aa9.97□□□□□ -0.81
UPF3A-212ENST00000619079 UNC119BA6NIH7 251 aa9.97□□□□□ -0.81
UPF3A-212ENST00000619079 WRBO00258 174 aa9.97□□□□□ -0.81
UPF3A-212ENST00000619079 BCL2L11O43521 198 aa9.97□□□□□ -0.81
UPF3A-212ENST00000619079 RLN1P04808 185 aa9.97□□□□□ -0.81
UPF3A-212ENST00000619079 CSF1P09603 554 aa9.97□□□□□ -0.81
UPF3A-212ENST00000619079 CALCBP10092 127 aa9.97□□□□□ -0.81
UPF3A-212ENST00000619079 ACADLP28330 430 aa9.97□□□□□ -0.81
UPF3A-212ENST00000619079 KCNJ3P48549 501 aa9.97□□□□□ -0.81
UPF3A-212ENST00000619079 PRLHRP49683 370 aa9.97□□□□□ -0.81
UPF3A-212ENST00000619079 SLC16A1P53985 500 aa9.97□□□□□ -0.81
UPF3A-212ENST00000619079 RGS8P57771 180 aaPredicted RBP9.97□□□□□ -0.81
UPF3A-212ENST00000619079 SSTP61278 116 aa9.97□□□□□ -0.81
UPF3A-212ENST00000619079 POLR2LP62875 67 aaKnown RBP9.97□□□□□ -0.81
UPF3A-212ENST00000619079 ZNF85Q03923 595 aa9.97□□□□□ -0.81
UPF3A-212ENST00000619079 SNTB1Q13884 538 aaKnown RBP9.97□□□□□ -0.81
UPF3A-212ENST00000619079 CBFBQ13951 182 aa9.97□□□□□ -0.81
UPF3A-212ENST00000619079 FAM74A1Q5RGS3 127 aa9.97□□□□□ -0.81
UPF3A-212ENST00000619079 TXNDC8Q6A555 127 aa9.97□□□□□ -0.81
UPF3A-212ENST00000619079 C5orf46Q6UWT4 87 aa9.97□□□□□ -0.81
UPF3A-212ENST00000619079 NUDT13Q86X67 352 aa9.97□□□□□ -0.81
UPF3A-212ENST00000619079 NKAIN4Q8IVV8 208 aa9.97□□□□□ -0.81
UPF3A-212ENST00000619079 SYS1Q8N2H4 156 aa9.97□□□□□ -0.81
UPF3A-212ENST00000619079 LNX2Q8N448 690 aa9.97□□□□□ -0.81
UPF3A-212ENST00000619079 OR13C5Q8NGS8 318 aa9.97□□□□□ -0.81
UPF3A-212ENST00000619079 OR6N1Q8NGY5 312 aa9.97□□□□□ -0.81
UPF3A-212ENST00000619079 OR5J2Q8NH18 312 aa9.97□□□□□ -0.81
UPF3A-212ENST00000619079 CCDC107Q8WV48 283 aa9.97□□□□□ -0.81
UPF3A-212ENST00000619079 GCDHQ92947 438 aaPredicted RBP9.97□□□□□ -0.81
UPF3A-212ENST00000619079 MOAP1Q96BY2 351 aa9.97□□□□□ -0.81
UPF3A-212ENST00000619079 SLC41A3Q96GZ6 507 aa9.97□□□□□ -0.81
UPF3A-212ENST00000619079 DERL3Q96Q80 235 aa9.97□□□□□ -0.81
UPF3A-212ENST00000619079 OR51M1Q9H341 326 aa9.97□□□□□ -0.81
UPF3A-212ENST00000619079 OR52D1Q9H346 318 aa9.97□□□□□ -0.81
UPF3A-212ENST00000619079 ADGRL4Q9HBW9 690 aa9.97□□□□□ -0.81
UPF3A-212ENST00000619079 CMC2Q9NRP2 79 aa9.97□□□□□ -0.81
UPF3A-212ENST00000619079 IL20RAQ9UHF4 553 aa9.97□□□□□ -0.81
UPF3A-212ENST00000619079 PCDHB10Q9UN67 800 aa9.97□□□□□ -0.81
UPF3A-212ENST00000619079 FOXJ3Q9UPW0 622 aa9.97□□□□□ -0.81
UPF3A-212ENST00000619079 ETV7Q9Y603 341 aa9.97□□□□□ -0.81
UPF3A-212ENST00000619079 MTCL1Q9Y4B5 1905 aaKnown RBP9.97□□□□□ -0.81
UPF3A-212ENST00000619079 OR6C68A6NDL8 312 aa9.96□□□□□ -0.81
UPF3A-212ENST00000619079 RIIAD1A6NNX1 92 aa9.96□□□□□ -0.81
UPF3A-212ENST00000619079 BHLHE40O14503 412 aa9.96□□□□□ -0.81
UPF3A-212ENST00000619079 GPRIN2O60269 458 aa9.96□□□□□ -0.81
UPF3A-212ENST00000619079 CRYBA1P05813 215 aa9.96□□□□□ -0.81
UPF3A-212ENST00000619079 CKMP06732 381 aa9.96□□□□□ -0.81
UPF3A-212ENST00000619079 FOLR2P14207 255 aa9.96□□□□□ -0.81
UPF3A-212ENST00000619079 CEBPBP17676 345 aa9.96□□□□□ -0.81
UPF3A-212ENST00000619079 DPP4P27487 766 aa9.96□□□□□ -0.81
UPF3A-212ENST00000619079 NTSP30990 170 aa9.96□□□□□ -0.81
UPF3A-212ENST00000619079 PRKAR1BP31321 381 aa9.96□□□□□ -0.81
UPF3A-212ENST00000619079 BSGP35613 385 aa9.96□□□□□ -0.81
UPF3A-212ENST00000619079 GUCA2BQ16661 112 aa9.96□□□□□ -0.81
UPF3A-212ENST00000619079 DCAF12L2Q5VW00 463 aa9.96□□□□□ -0.81
UPF3A-212ENST00000619079 OR2W3Q7Z3T1 314 aa9.96□□□□□ -0.81
UPF3A-212ENST00000619079 SYT9Q86SS6 491 aa9.96□□□□□ -0.81
UPF3A-212ENST00000619079 MUC20Q8N307 709 aaPredicted RBP9.96□□□□□ -0.81
UPF3A-212ENST00000619079 TRAM1L1Q8N609 369 aa9.96□□□□□ -0.81
UPF3A-212ENST00000619079 OR9A1PQ8NGU1 263 aa9.96□□□□□ -0.81
UPF3A-212ENST00000619079 SMPDL3BQ92485 455 aa9.96□□□□□ -0.81
UPF3A-212ENST00000619079 EDAQ92838 391 aa9.96□□□□□ -0.81
UPF3A-212ENST00000619079 FGF13Q92913 245 aa9.96□□□□□ -0.81
UPF3A-212ENST00000619079 HAVCR1Q96D42 359 aa9.96□□□□□ -0.81
UPF3A-212ENST00000619079 MS4A4EQ96PG1 132 aa9.96□□□□□ -0.81
UPF3A-212ENST00000619079 CD180Q99467 661 aa9.96□□□□□ -0.81
UPF3A-212ENST00000619079 MED20Q9H944 212 aa9.96□□□□□ -0.81
UPF3A-212ENST00000619079 IL21Q9HBE4 155 aa9.96□□□□□ -0.81
UPF3A-212ENST00000619079 DTX4Q9Y2E6 619 aa9.96□□□□□ -0.81
UPF3A-212ENST00000619079 A0A0C4DFX4 3053 aa9.96□□□□□ -0.82
UPF3A-212ENST00000619079 CXorf51AA0A1B0GTR3 108 aa9.96□□□□□ -0.82
UPF3A-212ENST00000619079 A0A1W2PPK0 400 aa9.96□□□□□ -0.82
UPF3A-212ENST00000619079 ZC3H12DA2A288 527 aaKnown RBP9.96□□□□□ -0.82
UPF3A-212ENST00000619079 RCBTB2O95199 551 aa9.96□□□□□ -0.82
UPF3A-212ENST00000619079 SRMP19623 302 aa9.96□□□□□ -0.82
UPF3A-212ENST00000619079 ACHEP22303 614 aa9.96□□□□□ -0.82
UPF3A-212ENST00000619079 LUMP51884 338 aaPredicted RBP9.96□□□□□ -0.82
UPF3A-212ENST00000619079 HCCSP53701 268 aa9.96□□□□□ -0.82
UPF3A-212ENST00000619079 PPP2CBP62714 309 aa9.96□□□□□ -0.82
UPF3A-212ENST00000619079 PPP2CAP67775 309 aa9.96□□□□□ -0.82
UPF3A-212ENST00000619079 BLOC1S1P78537 153 aa9.96□□□□□ -0.82
UPF3A-212ENST00000619079 FUT5Q11128 374 aa9.96□□□□□ -0.82
UPF3A-212ENST00000619079 GAS6Q14393 721 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms