RNA–Protein interactions for RNA: ENST00000618327.4

CIITA-213, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CIITA, Length 4,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-213ENST00000618327 EPHA8P29322 1005 aaPredicted RBP12.81□□□□□ -0.36
CIITA-213ENST00000618327 AQP2P41181 271 aa12.81□□□□□ -0.36
CIITA-213ENST00000618327 PPP5CP53041 499 aa12.81□□□□□ -0.36
CIITA-213ENST00000618327 PPP1CAP62136 330 aa12.81□□□□□ -0.36
CIITA-213ENST00000618327 POU3F1Q03052 451 aaPredicted RBP12.81□□□□□ -0.36
CIITA-213ENST00000618327 PRAMEF9Q5VWM5 478 aa12.81□□□□□ -0.36
CIITA-213ENST00000618327 TCEAL6Q6IPX3 200 aa12.81□□□□□ -0.36
CIITA-213ENST00000618327 Q8N402 240 aa12.81□□□□□ -0.36
CIITA-213ENST00000618327 PGAM5Q96HS1 289 aa12.81□□□□□ -0.36
CIITA-213ENST00000618327 PLEKHA6Q9Y2H5 1048 aa12.81□□□□□ -0.36
CIITA-213ENST00000618327 TMED7Q9Y3B3 224 aa12.81□□□□□ -0.36
CIITA-213ENST00000618327 A0A087WUU8 490 aa12.81□□□□□ -0.36
CIITA-213ENST00000618327 KRBA1A5PL33 1030 aa12.81□□□□□ -0.36
CIITA-213ENST00000618327 ZNF878C9JN71 531 aa12.81□□□□□ -0.36
CIITA-213ENST00000618327 PVALBP20472 110 aaPredicted RBP12.81□□□□□ -0.36
CIITA-213ENST00000618327 FASLGP48023 281 aa12.81□□□□□ -0.36
CIITA-213ENST00000618327 RHEBQ15382 184 aa12.81□□□□□ -0.36
CIITA-213ENST00000618327 OR1J4Q8NGS1 313 aa12.81□□□□□ -0.36
CIITA-213ENST00000618327 CPNE2Q96FN4 548 aaPredicted RBP12.81□□□□□ -0.36
CIITA-213ENST00000618327 INTS14Q96SY0 518 aa12.81□□□□□ -0.36
CIITA-213ENST00000618327 BOKQ9UMX3 212 aaPredicted RBP12.81□□□□□ -0.36
CIITA-213ENST00000618327 ARPC4-TTLL3A0A0A6YYG9 625 aa12.8□□□□□ -0.36
CIITA-213ENST00000618327 ARHGAP33O14559 1287 aa12.8□□□□□ -0.36
CIITA-213ENST00000618327 SRSF5Q13243 272 aaKnown RBP12.8□□□□□ -0.36
CIITA-213ENST00000618327 TMEM176BQ3YBM2 270 aaPredicted RBP12.8□□□□□ -0.36
CIITA-213ENST00000618327 C6orf15Q6UXA7 325 aaPredicted RBP12.8□□□□□ -0.36
CIITA-213ENST00000618327 OR5W2Q8NH69 310 aa12.8□□□□□ -0.36
CIITA-213ENST00000618327 RHOXF1Q8NHV9 184 aa12.8□□□□□ -0.36
CIITA-213ENST00000618327 SETD6Q8TBK2 473 aa12.8□□□□□ -0.36
CIITA-213ENST00000618327 PSORS1C1Q9UIG5 152 aa12.8□□□□□ -0.36
CIITA-213ENST00000618327 TEX13CA0A0J9YWL9 993 aa12.8□□□□□ -0.36
CIITA-213ENST00000618327 SMCO3A2RU48 225 aa12.8□□□□□ -0.36
CIITA-213ENST00000618327 FUOMA2VDF0 154 aa12.8□□□□□ -0.36
CIITA-213ENST00000618327 SLC19A2O60779 497 aa12.8□□□□□ -0.36
CIITA-213ENST00000618327 POU3F2P20265 443 aaPredicted RBP12.8□□□□□ -0.36
CIITA-213ENST00000618327 SLX4IPQ5VYV7 408 aa12.8□□□□□ -0.36
CIITA-213ENST00000618327 MORN4Q8NDC4 146 aa12.8□□□□□ -0.36
CIITA-213ENST00000618327 CASTOR1Q8WTX7 329 aa12.8□□□□□ -0.36
CIITA-213ENST00000618327 OR51E2Q9H255 320 aa12.8□□□□□ -0.36
CIITA-213ENST00000618327 ARID1BQ8NFD5 2236 aaPredicted RBP12.8□□□□□ -0.36
CIITA-213ENST00000618327 TRAV36DV7A0A075B6V5 113 aa12.8□□□□□ -0.36
CIITA-213ENST00000618327 CIB4A0PJX0 185 aa12.8□□□□□ -0.36
CIITA-213ENST00000618327 F5H0A9 414 aaPredicted RBP12.8□□□□□ -0.36
CIITA-213ENST00000618327 EIF4E2O60573 245 aaKnown RBP12.8□□□□□ -0.36
CIITA-213ENST00000618327 ZGLP1P0C6A0 271 aa12.8□□□□□ -0.36
CIITA-213ENST00000618327 CD40LGP29965 261 aa12.8□□□□□ -0.36
CIITA-213ENST00000618327 HNRNPFP52597 415 aaKnown RBP12.8□□□□□ -0.36
CIITA-213ENST00000618327 SIGLEC14Q08ET2 396 aa12.8□□□□□ -0.36
CIITA-213ENST00000618327 ZIC1Q15915 447 aa12.8□□□□□ -0.36
CIITA-213ENST00000618327 PRSS41Q7RTY9 318 aa12.8□□□□□ -0.36
CIITA-213ENST00000618327 TMPRSS12Q86WS5 348 aa12.8□□□□□ -0.36
CIITA-213ENST00000618327 RPS19BP1Q86WX3 136 aaKnown RBP12.8□□□□□ -0.36
CIITA-213ENST00000618327 OR5AK2Q8NH90 309 aa12.8□□□□□ -0.36
CIITA-213ENST00000618327 SNIP1Q8TAD8 396 aaKnown RBP12.8□□□□□ -0.36
CIITA-213ENST00000618327 TMEM9BQ9NQ34 198 aa12.8□□□□□ -0.36
CIITA-213ENST00000618327 NOX1Q9Y5S8 564 aa12.8□□□□□ -0.36
CIITA-213ENST00000618327 G3V3Y1 287 aa12.8□□□□□ -0.36
CIITA-213ENST00000618327 PIP5K1CO60331 668 aa12.8□□□□□ -0.36
CIITA-213ENST00000618327 MPLP40238 635 aa12.8□□□□□ -0.36
CIITA-213ENST00000618327 RGS6P49758 472 aa12.8□□□□□ -0.36
CIITA-213ENST00000618327 AIMP2Q13155 320 aaKnown RBP12.8□□□□□ -0.36
CIITA-213ENST00000618327 EIF2B1Q14232 305 aaKnown RBP12.8□□□□□ -0.36
CIITA-213ENST00000618327 PDCD11Q14690 1871 aaKnown RBP12.8□□□□□ -0.36
CIITA-213ENST00000618327 C8orf44Q96CB5 159 aa12.8□□□□□ -0.36
CIITA-213ENST00000618327 CEPT1Q9Y6K0 416 aa12.8□□□□□ -0.36
CIITA-213ENST00000618327 TEX13DA0A0J9YY54 714 aaPredicted RBP12.79□□□□□ -0.36
CIITA-213ENST00000618327 A0A1W2PPV9 198 aa12.79□□□□□ -0.36
CIITA-213ENST00000618327 PRAMEF25A6NGN4 478 aa12.79□□□□□ -0.36
CIITA-213ENST00000618327 CLUP10909 449 aa12.79□□□□□ -0.36
CIITA-213ENST00000618327 HTR2BP41595 481 aa12.79□□□□□ -0.36
CIITA-213ENST00000618327 BMXP51813 675 aa12.79□□□□□ -0.36
CIITA-213ENST00000618327 SLC22A10Q63ZE4 541 aa12.79□□□□□ -0.36
CIITA-213ENST00000618327 SLC6A19Q695T7 634 aa12.79□□□□□ -0.36
CIITA-213ENST00000618327 BORAQ6PGQ7 559 aa12.79□□□□□ -0.36
CIITA-213ENST00000618327 KCTD9Q7L273 389 aa12.79□□□□□ -0.36
CIITA-213ENST00000618327 CD300LFQ8TDQ1 290 aa12.79□□□□□ -0.36
CIITA-213ENST00000618327 EDEM2Q9BV94 578 aa12.79□□□□□ -0.36
CIITA-213ENST00000618327 ARL6Q9H0F7 186 aa12.79□□□□□ -0.36
CIITA-213ENST00000618327 MED20Q9H944 212 aa12.79□□□□□ -0.36
CIITA-213ENST00000618327 INPP5EQ9NRR6 644 aa12.79□□□□□ -0.36
CIITA-213ENST00000618327 MRPS2Q9Y399 296 aaKnown RBP12.79□□□□□ -0.36
CIITA-213ENST00000618327 CLDN24A6NM45 220 aa12.79□□□□□ -0.36
CIITA-213ENST00000618327 SCGB1D2O95969 90 aa12.79□□□□□ -0.36
CIITA-213ENST00000618327 ATP1B1P05026 303 aa12.79□□□□□ -0.36
CIITA-213ENST00000618327 ZNF14P17017 642 aaPredicted RBP12.79□□□□□ -0.36
CIITA-213ENST00000618327 PRKXP51817 358 aa12.79□□□□□ -0.36
CIITA-213ENST00000618327 NKX2-5P52952 324 aaPredicted RBP12.79□□□□□ -0.36
CIITA-213ENST00000618327 PCBP4P57723 403 aaKnown RBP12.79□□□□□ -0.36
CIITA-213ENST00000618327 UBE2FQ969M7 185 aa12.79□□□□□ -0.36
CIITA-213ENST00000618327 UTP23Q9BRU9 249 aaKnown RBP12.79□□□□□ -0.36
CIITA-213ENST00000618327 GABARAPL1Q9H0R8 117 aa12.79□□□□□ -0.36
CIITA-213ENST00000618327 FAM60AQ9NP50 221 aa12.79□□□□□ -0.36
CIITA-213ENST00000618327 FBXL3Q9UKT7 428 aa12.79□□□□□ -0.36
CIITA-213ENST00000618327 FARSAQ9Y285 508 aaKnown RBP12.79□□□□□ -0.36
CIITA-213ENST00000618327 NTNG1Q9Y2I2 539 aa12.79□□□□□ -0.36
CIITA-213ENST00000618327 LOXL2Q9Y4K0 774 aa12.79□□□□□ -0.36
CIITA-213ENST00000618327 A0A1B0GVC2 190 aa12.79□□□□□ -0.36
CIITA-213ENST00000618327 HTR3EA5X5Y0 456 aa12.79□□□□□ -0.36
CIITA-213ENST00000618327 OR6C76A6NM76 312 aa12.79□□□□□ -0.36
CIITA-213ENST00000618327 HTR2AP28223 471 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms