RNA–Protein interactions for RNA: ENST00000616390.1

CACNA1C-231, Transcript of calcium voltage-gated channel subunit alpha1 C, human

TSL 2 BASIC

Gene CACNA1C, Length 2,833 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1C-231	ENST00000616390	MAP3K8	P41279	467 aa		12.75	□□□□□ -0.37
CACNA1C-231	ENST00000616390	ACSM1	Q08AH1	577 aa		12.75	□□□□□ -0.37
CACNA1C-231	ENST00000616390	ACSM3	Q53FZ2	586 aa		12.75	□□□□□ -0.37
CACNA1C-231	ENST00000616390	MTFR2	Q6P444	385 aa		12.75	□□□□□ -0.37
CACNA1C-231	ENST00000616390	KRT74	Q7RTS7	529 aa		12.75	□□□□□ -0.37
CACNA1C-231	ENST00000616390	OR4M1	Q8NGD0	313 aa		12.75	□□□□□ -0.37
CACNA1C-231	ENST00000616390	ZNRF4	Q8WWF5	429 aa		12.75	□□□□□ -0.37
CACNA1C-231	ENST00000616390	KLHDC7B	Q96G42	594 aa		12.75	□□□□□ -0.37
CACNA1C-231	ENST00000616390	NMNAT3	Q96T66	252 aa		12.75	□□□□□ -0.37
CACNA1C-231	ENST00000616390	ERVMER34-1	Q9H9K5	563 aa		12.75	□□□□□ -0.37
CACNA1C-231	ENST00000616390	SPAG17	Q6Q759	2223 aa		12.75	□□□□□ -0.37
CACNA1C-231	ENST00000616390	VPS13A	Q96RL7	3174 aa		12.75	□□□□□ -0.37
CACNA1C-231	ENST00000616390		A0A1B0GVT2	93 aa		12.75	□□□□□ -0.37
CACNA1C-231	ENST00000616390	HMX3	A6NHT5	357 aa		12.75	□□□□□ -0.37
CACNA1C-231	ENST00000616390	BLOC1S5-TXNDC5	H3BN57	136 aa		12.75	□□□□□ -0.37
CACNA1C-231	ENST00000616390	PEPD	P12955	493 aa		12.75	□□□□□ -0.37
CACNA1C-231	ENST00000616390	TMEM11	P17152	192 aa		12.75	□□□□□ -0.37
CACNA1C-231	ENST00000616390	GNG2	P59768	71 aa		12.75	□□□□□ -0.37
CACNA1C-231	ENST00000616390	RDH10	Q8IZV5	341 aa		12.75	□□□□□ -0.37
CACNA1C-231	ENST00000616390	C16orf52	Q8NHV5	167 aa		12.75	□□□□□ -0.37
CACNA1C-231	ENST00000616390	TGM7	Q96PF1	710 aa		12.75	□□□□□ -0.37
CACNA1C-231	ENST00000616390	MOV10	Q9HCE1	1003 aa	Known RBP	12.75	□□□□□ -0.37
CACNA1C-231	ENST00000616390	GNG8	Q9UK08	70 aa		12.75	□□□□□ -0.37
CACNA1C-231	ENST00000616390	POMT2	Q9UKY4	750 aa		12.75	□□□□□ -0.37
CACNA1C-231	ENST00000616390		H3BSH0	61 aa		12.75	□□□□□ -0.37
CACNA1C-231	ENST00000616390	AK1	P00568	194 aa		12.75	□□□□□ -0.37
CACNA1C-231	ENST00000616390	RNH1	P13489	461 aa	Known RBP	12.75	□□□□□ -0.37
CACNA1C-231	ENST00000616390	SLC6A6	P31641	620 aa		12.75	□□□□□ -0.37
CACNA1C-231	ENST00000616390	SRP9	P49458	86 aa	Known RBP	12.75	□□□□□ -0.37
CACNA1C-231	ENST00000616390	KIAA0895L	Q68EN5	471 aa		12.75	□□□□□ -0.37
CACNA1C-231	ENST00000616390	ESPNL	Q6ZVH7	1005 aa		12.75	□□□□□ -0.37
CACNA1C-231	ENST00000616390	ZPLD1	Q8TCW7	415 aa		12.75	□□□□□ -0.37
CACNA1C-231	ENST00000616390	SLC7A6	Q92536	515 aa		12.75	□□□□□ -0.37
CACNA1C-231	ENST00000616390	RASD2	Q96D21	266 aa		12.75	□□□□□ -0.37
CACNA1C-231	ENST00000616390	LRRC61	Q9BV99	259 aa		12.75	□□□□□ -0.37
CACNA1C-231	ENST00000616390	C14orf105	Q9NVL8	296 aa		12.75	□□□□□ -0.37
CACNA1C-231	ENST00000616390	LUZP4	Q9P127	313 aa		12.75	□□□□□ -0.37
CACNA1C-231	ENST00000616390	TMEM184B	Q9Y519	407 aa	Predicted RBP	12.75	□□□□□ -0.37
CACNA1C-231	ENST00000616390	OR6C70	A6NIJ9	312 aa		12.74	□□□□□ -0.37
CACNA1C-231	ENST00000616390	EEF1E1	O43324	174 aa	Known RBP	12.74	□□□□□ -0.37
CACNA1C-231	ENST00000616390	FOXS1	O43638	330 aa		12.74	□□□□□ -0.37
CACNA1C-231	ENST00000616390	SDC3	O75056	442 aa		12.74	□□□□□ -0.37
CACNA1C-231	ENST00000616390	GLA	P06280	429 aa		12.74	□□□□□ -0.37
CACNA1C-231	ENST00000616390	TALDO1	P37837	337 aa		12.74	□□□□□ -0.37
CACNA1C-231	ENST00000616390	MAGEB1	P43366	347 aa		12.74	□□□□□ -0.37
CACNA1C-231	ENST00000616390	ERVK-25	P63136	954 aa		12.74	□□□□□ -0.37
CACNA1C-231	ENST00000616390	KCNAB1	Q14722	419 aa		12.74	□□□□□ -0.37
CACNA1C-231	ENST00000616390	NKAIN2	Q5VXU1	208 aa		12.74	□□□□□ -0.37
CACNA1C-231	ENST00000616390	FAM205BP	Q63HN1	556 aa		12.74	□□□□□ -0.37
CACNA1C-231	ENST00000616390	RPL13AP3	Q6NVV1	102 aa		12.74	□□□□□ -0.37
CACNA1C-231	ENST00000616390	MZT2B	Q6NZ67	158 aa		12.74	□□□□□ -0.37
CACNA1C-231	ENST00000616390	SFXN4	Q6P4A7	337 aa		12.74	□□□□□ -0.37
CACNA1C-231	ENST00000616390	TMEM43	Q9BTV4	400 aa		12.74	□□□□□ -0.37
CACNA1C-231	ENST00000616390	TRIM2	Q9C040	744 aa		12.74	□□□□□ -0.37
CACNA1C-231	ENST00000616390		Q9N2J8	555 aa		12.74	□□□□□ -0.37
CACNA1C-231	ENST00000616390	ST6GALNAC1	Q9NSC7	600 aa	Predicted RBP	12.74	□□□□□ -0.37
CACNA1C-231	ENST00000616390	NPAP1	Q9NZP6	1156 aa		12.74	□□□□□ -0.37
CACNA1C-231	ENST00000616390	ADAM30	Q9UKF2	790 aa		12.74	□□□□□ -0.37
CACNA1C-231	ENST00000616390	ALG5	Q9Y673	324 aa		12.74	□□□□□ -0.37
CACNA1C-231	ENST00000616390	IDS	B3KWA1	339 aa		12.74	□□□□□ -0.37
CACNA1C-231	ENST00000616390	SMLR1	H3BR10	107 aa		12.74	□□□□□ -0.37
CACNA1C-231	ENST00000616390	FMO6P	O60774	539 aa		12.74	□□□□□ -0.37
CACNA1C-231	ENST00000616390	IFNG	P01579	166 aa		12.74	□□□□□ -0.37
CACNA1C-231	ENST00000616390	TF	P02787	698 aa		12.74	□□□□□ -0.37
CACNA1C-231	ENST00000616390	F8A1	P23610	371 aa		12.74	□□□□□ -0.37
CACNA1C-231	ENST00000616390	GFER	P55789	205 aa		12.74	□□□□□ -0.37
CACNA1C-231	ENST00000616390	C19orf57	Q0VDD7	668 aa		12.74	□□□□□ -0.37
CACNA1C-231	ENST00000616390	RAB30	Q15771	203 aa		12.74	□□□□□ -0.37
CACNA1C-231	ENST00000616390	EXOSC6	Q5RKV6	272 aa	Known RBP	12.74	□□□□□ -0.37
CACNA1C-231	ENST00000616390	CCDC28A	Q8IWP9	274 aa		12.74	□□□□□ -0.37
CACNA1C-231	ENST00000616390	PRR22	Q8IZ63	422 aa		12.74	□□□□□ -0.37
CACNA1C-231	ENST00000616390	ZNF321P	Q8N8H1	164 aa		12.74	□□□□□ -0.37
CACNA1C-231	ENST00000616390	LMX1A	Q8TE12	382 aa		12.74	□□□□□ -0.37
CACNA1C-231	ENST00000616390	SNX33	Q8WV41	574 aa		12.74	□□□□□ -0.37
CACNA1C-231	ENST00000616390	UPRT	Q96BW1	309 aa		12.74	□□□□□ -0.37
CACNA1C-231	ENST00000616390	VSTM2L	Q96N03	204 aa		12.74	□□□□□ -0.37
CACNA1C-231	ENST00000616390	ZFP3	Q96NJ6	502 aa		12.74	□□□□□ -0.37
CACNA1C-231	ENST00000616390	PDCD1LG2	Q9BQ51	273 aa		12.74	□□□□□ -0.37
CACNA1C-231	ENST00000616390	OR10A5	Q9H207	317 aa		12.74	□□□□□ -0.37
CACNA1C-231	ENST00000616390	MKKS	Q9NPJ1	570 aa	Predicted RBP	12.74	□□□□□ -0.37
CACNA1C-231	ENST00000616390	PNO1	Q9NRX1	252 aa	Known RBP	12.74	□□□□□ -0.37
CACNA1C-231	ENST00000616390	RBFOX1	Q9NWB1	397 aa	Known RBP	12.74	□□□□□ -0.37
CACNA1C-231	ENST00000616390	EML5	Q05BV3	1969 aa		12.73	□□□□□ -0.37
CACNA1C-231	ENST00000616390	SELENOF	O60613	162 aa		12.73	□□□□□ -0.37
CACNA1C-231	ENST00000616390	CT45A8	P0DMV1	189 aa		12.73	□□□□□ -0.37
CACNA1C-231	ENST00000616390	CT45A9	P0DMV2	189 aa		12.73	□□□□□ -0.37
CACNA1C-231	ENST00000616390	APEH	P13798	732 aa	Known RBP	12.73	□□□□□ -0.37
CACNA1C-231	ENST00000616390	MTNR1B	P49286	362 aa		12.73	□□□□□ -0.37
CACNA1C-231	ENST00000616390	FHL1	Q13642	323 aa		12.73	□□□□□ -0.37
CACNA1C-231	ENST00000616390	CCIN	Q13939	588 aa		12.73	□□□□□ -0.37
CACNA1C-231	ENST00000616390	CT45A2	Q5DJT8	189 aa		12.73	□□□□□ -0.37
CACNA1C-231	ENST00000616390	MANEA	Q5SRI9	462 aa		12.73	□□□□□ -0.37
CACNA1C-231	ENST00000616390	PXDC1	Q5TGL8	231 aa		12.73	□□□□□ -0.37
CACNA1C-231	ENST00000616390	HBM	Q6B0K9	141 aa		12.73	□□□□□ -0.37
CACNA1C-231	ENST00000616390	ULK3	Q6PHR2	472 aa		12.73	□□□□□ -0.37
CACNA1C-231	ENST00000616390	PRSS58	Q8IYP2	241 aa		12.73	□□□□□ -0.37
CACNA1C-231	ENST00000616390	GPR135	Q8IZ08	494 aa		12.73	□□□□□ -0.37
CACNA1C-231	ENST00000616390	BCORP1	Q8N888	145 aa		12.73	□□□□□ -0.37
CACNA1C-231	ENST00000616390	TRMT10A	Q8TBZ6	339 aa	Known RBP	12.73	□□□□□ -0.37
CACNA1C-231	ENST00000616390	MAP6	Q96JE9	813 aa		12.73	□□□□□ -0.37

Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms