RNA–Protein interactions for RNA: ENST00000600970.5

USE1-208, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 5

Gene USE1, Length 826 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-208ENST00000600970 ZMYND19Q96E35 227 aaPredicted RBP14.53□□□□□ -0.08
USE1-208ENST00000600970 SF3B5Q9BWJ5 86 aaKnown RBP14.53□□□□□ -0.08
USE1-208ENST00000600970 METTL17Q9H7H0 456 aaPredicted RBP14.53□□□□□ -0.08
USE1-208ENST00000600970 PCDHB14Q9Y5E9 798 aa14.53□□□□□ -0.08
USE1-208ENST00000600970 ARPC4-TTLL3A0A0A6YYG9 625 aa14.52□□□□□ -0.09
USE1-208ENST00000600970 TMEM129A0AVI4 362 aa14.52□□□□□ -0.09
USE1-208ENST00000600970 NPHS1O60500 1241 aa14.52□□□□□ -0.09
USE1-208ENST00000600970 KRT33AO76009 404 aa14.52□□□□□ -0.09
USE1-208ENST00000600970 AKR7A3O95154 331 aa14.52□□□□□ -0.09
USE1-208ENST00000600970 ERCC1P07992 297 aaPredicted RBP14.52□□□□□ -0.09
USE1-208ENST00000600970 G6PDP11413 515 aa14.52□□□□□ -0.09
USE1-208ENST00000600970 IFNGR1P15260 489 aa14.52□□□□□ -0.09
USE1-208ENST00000600970 PCMT1P22061 227 aa14.52□□□□□ -0.09
USE1-208ENST00000600970 TACR3P29371 465 aa14.52□□□□□ -0.09
USE1-208ENST00000600970 THBS4P35443 961 aa14.52□□□□□ -0.09
USE1-208ENST00000600970 COMPP49747 757 aaPredicted RBP14.52□□□□□ -0.09
USE1-208ENST00000600970 HGFACQ04756 655 aa14.52□□□□□ -0.09
USE1-208ENST00000600970 CEACAM7Q14002 265 aa14.52□□□□□ -0.09
USE1-208ENST00000600970 CCNIQ14094 377 aa14.52□□□□□ -0.09
USE1-208ENST00000600970 TNFAIP8L2Q6P589 184 aaPredicted RBP14.52□□□□□ -0.09
USE1-208ENST00000600970 C4orf33Q8N1A6 199 aa14.52□□□□□ -0.09
USE1-208ENST00000600970 SVOPLQ8N434 492 aa14.52□□□□□ -0.09
USE1-208ENST00000600970 NUP37Q8NFH4 326 aa14.52□□□□□ -0.09
USE1-208ENST00000600970 UBASH3BQ8TF42 649 aa14.52□□□□□ -0.09
USE1-208ENST00000600970 WDR60Q8WVS4 1066 aa14.52□□□□□ -0.09
USE1-208ENST00000600970 PIF1Q9H611 641 aa14.52□□□□□ -0.09
USE1-208ENST00000600970 ZNF442Q9H7R0 627 aa14.52□□□□□ -0.09
USE1-208ENST00000600970 SH3PXD2BA1X283 911 aa14.51□□□□□ -0.09
USE1-208ENST00000600970 PRAMEF27A3QJZ7 478 aa14.51□□□□□ -0.09
USE1-208ENST00000600970 ZNF587BE7ETH6 402 aa14.51□□□□□ -0.09
USE1-208ENST00000600970 LYNX1G3V0Z9 82 aa14.51□□□□□ -0.09
USE1-208ENST00000600970 RNASET2O00584 256 aaKnown RBP14.51□□□□□ -0.09
USE1-208ENST00000600970 SHBGP04278 402 aa14.51□□□□□ -0.09
USE1-208ENST00000600970 LYNX1P0DP58 116 aa14.51□□□□□ -0.09
USE1-208ENST00000600970 KRT4P19013 534 aa14.51□□□□□ -0.09
USE1-208ENST00000600970 NPR2P20594 1047 aa14.51□□□□□ -0.09
USE1-208ENST00000600970 ALDH3A1P30838 453 aa14.51□□□□□ -0.09
USE1-208ENST00000600970 SELENOPP49908 381 aa14.51□□□□□ -0.09
USE1-208ENST00000600970 ACTG1P63261 375 aa14.51□□□□□ -0.09
USE1-208ENST00000600970 OR7A5Q15622 319 aa14.51□□□□□ -0.09
USE1-208ENST00000600970 ADRM1Q16186 407 aa14.51□□□□□ -0.09
USE1-208ENST00000600970 LINGO2Q7L985 606 aa14.51□□□□□ -0.09
USE1-208ENST00000600970 SPATA21Q7Z572 469 aa14.51□□□□□ -0.09
USE1-208ENST00000600970 GPAT4Q86UL3 456 aa14.51□□□□□ -0.09
USE1-208ENST00000600970 MYPOPQ86VE0 399 aaPredicted RBP14.51□□□□□ -0.09
USE1-208ENST00000600970 OR4A15Q8NGL6 344 aa14.51□□□□□ -0.09
USE1-208ENST00000600970 SGMS2Q8NHU3 365 aa14.51□□□□□ -0.09
USE1-208ENST00000600970 MAGEE2Q8TD90 523 aaPredicted RBP14.51□□□□□ -0.09
USE1-208ENST00000600970 ANP32BQ92688 251 aaKnown RBP14.51□□□□□ -0.09
USE1-208ENST00000600970 ALKBH3Q96Q83 286 aaPredicted RBP14.51□□□□□ -0.09
USE1-208ENST00000600970 NELFAQ9H3P2 528 aa14.51□□□□□ -0.09
USE1-208ENST00000600970 A0A096LPE4 126 aa14.5□□□□□ -0.09
USE1-208ENST00000600970 A0A1W2PPZ6 126 aa14.5□□□□□ -0.09
USE1-208ENST00000600970 TMEM89A2RUT3 159 aa14.5□□□□□ -0.09
USE1-208ENST00000600970 LIPT2A6NK58 231 aa14.5□□□□□ -0.09
USE1-208ENST00000600970 AQP7P3A6NL99 342 aa14.5□□□□□ -0.09
USE1-208ENST00000600970 B4DSR2 109 aa14.5□□□□□ -0.09
USE1-208ENST00000600970 IGKV3-15P01624 115 aa14.5□□□□□ -0.09
USE1-208ENST00000600970 GPIP06744 558 aa14.5□□□□□ -0.09
USE1-208ENST00000600970 CELA3BP08861 270 aa14.5□□□□□ -0.09
USE1-208ENST00000600970 MAP2K6P52564 334 aa14.5□□□□□ -0.09
USE1-208ENST00000600970 CLDN8P56748 225 aa14.5□□□□□ -0.09
USE1-208ENST00000600970 GPAT3Q53EU6 434 aa14.5□□□□□ -0.09
USE1-208ENST00000600970 GLCCI1Q86VQ1 547 aa14.5□□□□□ -0.09
USE1-208ENST00000600970 C3orf56Q8N813 242 aa14.5□□□□□ -0.09
USE1-208ENST00000600970 FAM169BQ8N8A8 192 aa14.5□□□□□ -0.09
USE1-208ENST00000600970 MNS1Q8NEH6 495 aa14.5□□□□□ -0.09
USE1-208ENST00000600970 ZNF317Q96PQ6 595 aaPredicted RBP14.5□□□□□ -0.09
USE1-208ENST00000600970 MECRQ9BV79 373 aa14.5□□□□□ -0.09
USE1-208ENST00000600970 VSTM5A8MXK1 200 aa14.49□□□□□ -0.09
USE1-208ENST00000600970 FAAHO00519 579 aa14.49□□□□□ -0.09
USE1-208ENST00000600970 UPK3AO75631 287 aa14.49□□□□□ -0.09
USE1-208ENST00000600970 UQCRC2P22695 453 aa14.49□□□□□ -0.09
USE1-208ENST00000600970 KHKP50053 298 aa14.49□□□□□ -0.09
USE1-208ENST00000600970 P2RY4P51582 365 aa14.49□□□□□ -0.09
USE1-208ENST00000600970 SAXO2Q658L1 398 aa14.49□□□□□ -0.09
USE1-208ENST00000600970 TMEM225Q6GV28 225 aa14.49□□□□□ -0.09
USE1-208ENST00000600970 CREB3L2Q70SY1 520 aa14.49□□□□□ -0.09
USE1-208ENST00000600970 CMIPQ8IY22 773 aa14.49□□□□□ -0.09
USE1-208ENST00000600970 IFT20Q8IY31 132 aa14.49□□□□□ -0.09
USE1-208ENST00000600970 CDK20Q8IZL9 346 aa14.49□□□□□ -0.09
USE1-208ENST00000600970 CKAP2Q8WWK9 683 aa14.49□□□□□ -0.09
USE1-208ENST00000600970 TUBGCP3Q96CW5 907 aa14.49□□□□□ -0.09
USE1-208ENST00000600970 C16orf45Q96MC5 204 aaPredicted RBP14.49□□□□□ -0.09
USE1-208ENST00000600970 ANKRD27Q96NW4 1050 aa14.49□□□□□ -0.09
USE1-208ENST00000600970 DYNLRB1Q9NP97 96 aa14.49□□□□□ -0.09
USE1-208ENST00000600970 ZDHHC2Q9UIJ5 367 aa14.49□□□□□ -0.09
USE1-208ENST00000600970 TENM1Q9UKZ4 2725 aa14.49□□□□□ -0.09
USE1-208ENST00000600970 SMIM23A6NLE4 172 aa14.48□□□□□ -0.09
USE1-208ENST00000600970 SCN2BO60939 215 aa14.48□□□□□ -0.09
USE1-208ENST00000600970 RGS9O75916 674 aaPredicted RBP14.48□□□□□ -0.09
USE1-208ENST00000600970 CPSF4O95639 269 aaKnown RBP14.48□□□□□ -0.09
USE1-208ENST00000600970 ADRA2AP08913 450 aa14.48□□□□□ -0.09
USE1-208ENST00000600970 HOXB1P14653 301 aaPredicted RBP14.48□□□□□ -0.09
USE1-208ENST00000600970 ARRB2P32121 409 aa14.48□□□□□ -0.09
USE1-208ENST00000600970 HPCAP84074 193 aa14.48□□□□□ -0.09
USE1-208ENST00000600970 IL1RL1Q01638 556 aa14.48□□□□□ -0.09
USE1-208ENST00000600970 EPS8Q12929 822 aa14.48□□□□□ -0.09
USE1-208ENST00000600970 NIPAL3Q6P499 406 aa14.48□□□□□ -0.09
USE1-208ENST00000600970 ZCCHC23Q6ZST2 131 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms