RNA–Protein interactions for RNA: ENST00000600648.1

FARP1-231, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, human

TSL 5

Gene FARP1, Length 433 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FARP1-231	ENST00000600648	AAED1	Q7RTV5	226 aa		18.92	■□□□□ 0.62
FARP1-231	ENST00000600648	MIER2	Q8N344	545 aa		18.92	■□□□□ 0.62
FARP1-231	ENST00000600648	ZIC4	Q8N9L1	334 aa		18.92	■□□□□ 0.62
FARP1-231	ENST00000600648	TLCD1	Q96CP7	247 aa		18.92	■□□□□ 0.62
FARP1-231	ENST00000600648	DHRS9	Q9BPW9	319 aa		18.92	■□□□□ 0.62
FARP1-231	ENST00000600648	CACYBP	Q9HB71	228 aa	Known RBP	18.92	■□□□□ 0.62
FARP1-231	ENST00000600648	BARX1	Q9HBU1	254 aa	Predicted RBP	18.92	■□□□□ 0.62
FARP1-231	ENST00000600648	TMBIM4	Q9HC24	238 aa		18.92	■□□□□ 0.62
FARP1-231	ENST00000600648	SLC17A5	Q9NRA2	495 aa		18.92	■□□□□ 0.62
FARP1-231	ENST00000600648	ADAM21	Q9UKJ8	722 aa		18.92	■□□□□ 0.62
FARP1-231	ENST00000600648	CHST2	Q9Y4C5	530 aa		18.92	■□□□□ 0.62
FARP1-231	ENST00000600648	ATP23	Q9Y6H3	246 aa		18.92	■□□□□ 0.62
FARP1-231	ENST00000600648	FRS3	O43559	492 aa		18.91	■□□□□ 0.62
FARP1-231	ENST00000600648	SLC18A1	P54219	525 aa		18.91	■□□□□ 0.62
FARP1-231	ENST00000600648	HOXC5	Q00444	222 aa		18.91	■□□□□ 0.62
FARP1-231	ENST00000600648	SLC2A7	Q6PXP3	512 aa		18.91	■□□□□ 0.62
FARP1-231	ENST00000600648	SERPINA11	Q86U17	422 aa		18.91	■□□□□ 0.62
FARP1-231	ENST00000600648	FBXL14	Q8N1E6	418 aa		18.91	■□□□□ 0.62
FARP1-231	ENST00000600648	DEPDC4	Q8N2C3	294 aa		18.91	■□□□□ 0.62
FARP1-231	ENST00000600648	MAL2	Q969L2	176 aa		18.91	■□□□□ 0.62
FARP1-231	ENST00000600648	TAPBPL	Q9BX59	468 aa		18.91	■□□□□ 0.62
FARP1-231	ENST00000600648	GRIP2	Q9C0E4	1043 aa		18.91	■□□□□ 0.62
FARP1-231	ENST00000600648	DCTN4	Q9UJW0	460 aa		18.91	■□□□□ 0.62
FARP1-231	ENST00000600648	ZNF232	Q9UNY5	417 aa		18.91	■□□□□ 0.62
FARP1-231	ENST00000600648	ABCA1	O95477	2261 aa		18.9	■□□□□ 0.62
FARP1-231	ENST00000600648	TMEM247	A6NEH6	219 aa		18.9	■□□□□ 0.62
FARP1-231	ENST00000600648	AQP7P3	A6NL99	342 aa		18.9	■□□□□ 0.62
FARP1-231	ENST00000600648		A8MVM7	634 aa		18.9	■□□□□ 0.62
FARP1-231	ENST00000600648	TP53	P04637	393 aa	Predicted RBP	18.9	■□□□□ 0.62
FARP1-231	ENST00000600648	MPG	P29372	298 aa		18.9	■□□□□ 0.62
FARP1-231	ENST00000600648	NUDT6	P53370	316 aa		18.9	■□□□□ 0.62
FARP1-231	ENST00000600648	TGFBR3	Q03167	851 aa		18.9	■□□□□ 0.62
FARP1-231	ENST00000600648	LGALS3BP	Q08380	585 aa		18.9	■□□□□ 0.62
FARP1-231	ENST00000600648	HIKESHI	Q53FT3	197 aa		18.9	■□□□□ 0.62
FARP1-231	ENST00000600648	RNF220	Q5VTB9	566 aa		18.9	■□□□□ 0.62
FARP1-231	ENST00000600648	TMEM225	Q6GV28	225 aa		18.9	■□□□□ 0.62
FARP1-231	ENST00000600648	C11orf71	Q6IPW1	123 aa		18.9	■□□□□ 0.62
FARP1-231	ENST00000600648	MSANTD1	Q6ZTZ1	278 aa		18.9	■□□□□ 0.62
FARP1-231	ENST00000600648	MUC15	Q8N387	334 aa		18.9	■□□□□ 0.62
FARP1-231	ENST00000600648	GTF2H4	Q92759	462 aa		18.9	■□□□□ 0.62
FARP1-231	ENST00000600648	TMEM45B	Q96B21	275 aa		18.9	■□□□□ 0.62
FARP1-231	ENST00000600648	ADAD1	Q96M93	576 aa	Known RBP	18.9	■□□□□ 0.62
FARP1-231	ENST00000600648	MDFI	Q99750	246 aa		18.9	■□□□□ 0.62
FARP1-231	ENST00000600648	SPATA9	Q9BWV2	254 aa		18.9	■□□□□ 0.62
FARP1-231	ENST00000600648	AMBRA1	Q9C0C7	1298 aa		18.9	■□□□□ 0.62
FARP1-231	ENST00000600648	CBLN4	Q9NTU7	201 aa		18.9	■□□□□ 0.62
FARP1-231	ENST00000600648	PCDHB14	Q9Y5E9	798 aa		18.9	■□□□□ 0.62
FARP1-231	ENST00000600648	USH1C	Q9Y6N9	552 aa		18.9	■□□□□ 0.62
FARP1-231	ENST00000600648	IGHV4-30-2	A0A087WSY4	118 aa		18.89	■□□□□ 0.61
FARP1-231	ENST00000600648		A0A0G2JPF8	293 aa		18.89	■□□□□ 0.61
FARP1-231	ENST00000600648	FAM234B	A2RU67	622 aa		18.89	■□□□□ 0.61
FARP1-231	ENST00000600648	HNRNPCL2	B2RXH8	293 aa		18.89	■□□□□ 0.61
FARP1-231	ENST00000600648	HNRNPCL3	B7ZW38	293 aa		18.89	■□□□□ 0.61
FARP1-231	ENST00000600648	KLF11	O14901	512 aa		18.89	■□□□□ 0.61
FARP1-231	ENST00000600648	HNRNPCL1	O60812	293 aa	Known RBP	18.89	■□□□□ 0.61
FARP1-231	ENST00000600648	KRT33A	O76009	404 aa		18.89	■□□□□ 0.61
FARP1-231	ENST00000600648	HNRNPCL4	P0DMR1	293 aa		18.89	■□□□□ 0.61
FARP1-231	ENST00000600648	NRF1	Q16656	503 aa		18.89	■□□□□ 0.61
FARP1-231	ENST00000600648	ZNF311	Q5JNZ3	666 aa		18.89	■□□□□ 0.61
FARP1-231	ENST00000600648	C1orf140	Q5VVS0	124 aa		18.89	■□□□□ 0.61
FARP1-231	ENST00000600648	KLHL24	Q6TFL4	600 aa		18.89	■□□□□ 0.61
FARP1-231	ENST00000600648	DNM1P46	Q6ZS02	220 aa		18.89	■□□□□ 0.61
FARP1-231	ENST00000600648	C1orf162	Q8NEQ5	155 aa	Predicted RBP	18.89	■□□□□ 0.61
FARP1-231	ENST00000600648	C3orf49	Q96BT1	292 aa		18.89	■□□□□ 0.61
FARP1-231	ENST00000600648	RHNO1	Q9BSD3	238 aa		18.89	■□□□□ 0.61
FARP1-231	ENST00000600648	SF3B5	Q9BWJ5	86 aa	Known RBP	18.89	■□□□□ 0.61
FARP1-231	ENST00000600648	PAIP1	Q9H074	479 aa	Known RBP	18.89	■□□□□ 0.61
FARP1-231	ENST00000600648	AMDHD2	Q9Y303	409 aa		18.89	■□□□□ 0.61
FARP1-231	ENST00000600648	CR1	P17927	2039 aa		18.89	■□□□□ 0.61
FARP1-231	ENST00000600648	CLIC1	O00299	241 aa		18.88	■□□□□ 0.61
FARP1-231	ENST00000600648	CRLF1	O75462	422 aa		18.88	■□□□□ 0.61
FARP1-231	ENST00000600648	SELENOP	P49908	381 aa		18.88	■□□□□ 0.61
FARP1-231	ENST00000600648	RGN	Q15493	299 aa		18.88	■□□□□ 0.61
FARP1-231	ENST00000600648	PRAMEF8	Q5VWM4	474 aa		18.88	■□□□□ 0.61
FARP1-231	ENST00000600648	PRAMEF7	Q5VXH5	474 aa		18.88	■□□□□ 0.61
FARP1-231	ENST00000600648	C17orf78	Q8N4C9	275 aa		18.88	■□□□□ 0.61
FARP1-231	ENST00000600648	POMGNT2	Q8NAT1	580 aa		18.88	■□□□□ 0.61
FARP1-231	ENST00000600648	SLC25A36	Q96CQ1	311 aa		18.88	■□□□□ 0.61
FARP1-231	ENST00000600648	ARMC7	Q9H6L4	198 aa		18.88	■□□□□ 0.61
FARP1-231	ENST00000600648	YAE1D1	Q9NRH1	226 aa		18.88	■□□□□ 0.61
FARP1-231	ENST00000600648	THUMPD1	Q9NXG2	353 aa	Known RBP	18.88	■□□□□ 0.61
FARP1-231	ENST00000600648	ATP6V1G2-DDX39B	F2Z307	99 aa		18.87	■□□□□ 0.61
FARP1-231	ENST00000600648	ERLIN1	O75477	346 aa		18.87	■□□□□ 0.61
FARP1-231	ENST00000600648	AHSA1	O95433	338 aa		18.87	■□□□□ 0.61
FARP1-231	ENST00000600648	LGI1	O95970	557 aa		18.87	■□□□□ 0.61
FARP1-231	ENST00000600648	P2RY4	P51582	365 aa		18.87	■□□□□ 0.61
FARP1-231	ENST00000600648	PRPS1	P60891	318 aa		18.87	■□□□□ 0.61
FARP1-231	ENST00000600648	RAB35	Q15286	201 aa		18.87	■□□□□ 0.61
FARP1-231	ENST00000600648	BEND6	Q5SZJ8	279 aa	Predicted RBP	18.87	■□□□□ 0.61
FARP1-231	ENST00000600648	EPGN	Q6UW88	154 aa		18.87	■□□□□ 0.61
FARP1-231	ENST00000600648	KDM8	Q8N371	416 aa		18.87	■□□□□ 0.61
FARP1-231	ENST00000600648	HEATR1	Q9H583	2144 aa	Known RBP	18.87	■□□□□ 0.61
FARP1-231	ENST00000600648	FKRP	Q9H9S5	495 aa		18.87	■□□□□ 0.61
FARP1-231	ENST00000600648	IFT52	Q9Y366	437 aa		18.87	■□□□□ 0.61
FARP1-231	ENST00000600648	C5orf58	C9J3I9	102 aa		18.86	■□□□□ 0.61
FARP1-231	ENST00000600648	WNT11	O96014	354 aa		18.86	■□□□□ 0.61
FARP1-231	ENST00000600648	STX1B	P61266	288 aa		18.86	■□□□□ 0.61
FARP1-231	ENST00000600648	ZSWIM7	Q19AV6	140 aa		18.86	■□□□□ 0.61
FARP1-231	ENST00000600648	NIPAL3	Q6P499	406 aa		18.86	■□□□□ 0.61
FARP1-231	ENST00000600648	CLEC2A	Q6UVW9	174 aa		18.86	■□□□□ 0.61

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