RNA–Protein interactions for RNA: ENST00000599156.5

DDX49-208, Transcript of DEAD-box helicase 49, human

TSL 5

Gene DDX49, Length 633 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX49-208	ENST00000599156	ZNF385A	Q96PM9	386 aa	Known RBP	13.63	□□□□□ -0.23
DDX49-208	ENST00000599156	DUSP26	Q9BV47	211 aa		13.63	□□□□□ -0.23
DDX49-208	ENST00000599156	RBM4	Q9BWF3	364 aa	Known RBP	13.63	□□□□□ -0.23
DDX49-208	ENST00000599156	ST6GALNAC1	Q9NSC7	600 aa	Predicted RBP	13.63	□□□□□ -0.23
DDX49-208	ENST00000599156	HIF1AN	Q9NWT6	349 aa		13.63	□□□□□ -0.23
DDX49-208	ENST00000599156	TBK1	Q9UHD2	729 aa		13.63	□□□□□ -0.23
DDX49-208	ENST00000599156	OSGIN1	Q9UJX0	560 aa		13.63	□□□□□ -0.23
DDX49-208	ENST00000599156	GRIP1	Q9Y3R0	1128 aa		13.63	□□□□□ -0.23
DDX49-208	ENST00000599156	WDR45	Q9Y484	360 aa		13.63	□□□□□ -0.23
DDX49-208	ENST00000599156	TMEM72	A0PK05	275 aa		13.62	□□□□□ -0.23
DDX49-208	ENST00000599156	RIPK2	O43353	540 aa		13.62	□□□□□ -0.23
DDX49-208	ENST00000599156	LGI1	O95970	557 aa		13.62	□□□□□ -0.23
DDX49-208	ENST00000599156	IGKV3-15	P01624	115 aa		13.62	□□□□□ -0.23
DDX49-208	ENST00000599156	CRHR1	P34998	444 aa		13.62	□□□□□ -0.23
DDX49-208	ENST00000599156	THBS4	P35443	961 aa		13.62	□□□□□ -0.23
DDX49-208	ENST00000599156	ARFIP2	P53365	341 aa		13.62	□□□□□ -0.23
DDX49-208	ENST00000599156	ATAD3B	Q5T9A4	648 aa		13.62	□□□□□ -0.23
DDX49-208	ENST00000599156	SPATA21	Q7Z572	469 aa		13.62	□□□□□ -0.23
DDX49-208	ENST00000599156	RIMKLA	Q8IXN7	391 aa		13.62	□□□□□ -0.23
DDX49-208	ENST00000599156	SVOPL	Q8N434	492 aa		13.62	□□□□□ -0.23
DDX49-208	ENST00000599156	KRTCAP2	Q8N6L1	136 aa		13.62	□□□□□ -0.23
DDX49-208	ENST00000599156	JMJD8	Q96S16	334 aa		13.62	□□□□□ -0.23
DDX49-208	ENST00000599156	GATA5	Q9BWX5	397 aa	Predicted RBP	13.62	□□□□□ -0.23
DDX49-208	ENST00000599156	DYNLRB1	Q9NP97	96 aa		13.62	□□□□□ -0.23
DDX49-208	ENST00000599156	AQP7P3	A6NL99	342 aa		13.61	□□□□□ -0.23
DDX49-208	ENST00000599156	NR5A2	O00482	541 aa		13.61	□□□□□ -0.23
DDX49-208	ENST00000599156	DYNC1I1	O14576	645 aa		13.61	□□□□□ -0.23
DDX49-208	ENST00000599156	PIP5K1B	O14986	540 aa		13.61	□□□□□ -0.23
DDX49-208	ENST00000599156	PEX11A	O75192	247 aa		13.61	□□□□□ -0.23
DDX49-208	ENST00000599156	GPI	P06744	558 aa		13.61	□□□□□ -0.23
DDX49-208	ENST00000599156	IGFBP1	P08833	259 aa	Predicted RBP	13.61	□□□□□ -0.23
DDX49-208	ENST00000599156	LIMS1	P48059	325 aa		13.61	□□□□□ -0.23
DDX49-208	ENST00000599156	ATP6AP1L	Q52LC2	224 aa		13.61	□□□□□ -0.23
DDX49-208	ENST00000599156	PRR31	Q5SQ13	230 aa		13.61	□□□□□ -0.23
DDX49-208	ENST00000599156	SHQ1	Q6PI26	577 aa	Known RBP	13.61	□□□□□ -0.23
DDX49-208	ENST00000599156	FRRS1	Q6ZNA5	592 aa		13.61	□□□□□ -0.23
DDX49-208	ENST00000599156	TEX29	Q8N6K0	151 aa		13.61	□□□□□ -0.23
DDX49-208	ENST00000599156	TMEM99	Q8N816	258 aa		13.61	□□□□□ -0.23
DDX49-208	ENST00000599156	CKAP2	Q8WWK9	683 aa		13.61	□□□□□ -0.23
DDX49-208	ENST00000599156	XAGE5	Q8WWM1	108 aa		13.61	□□□□□ -0.23
DDX49-208	ENST00000599156	ZG16B	Q96DA0	208 aa		13.61	□□□□□ -0.23
DDX49-208	ENST00000599156	OR51I1	Q9H343	314 aa		13.61	□□□□□ -0.23
DDX49-208	ENST00000599156	GIMAP2	Q9UG22	337 aa		13.61	□□□□□ -0.23
DDX49-208	ENST00000599156	RNF103-CHMP3	A0A140T963	221 aa		13.6	□□□□□ -0.23
DDX49-208	ENST00000599156	SH3PXD2B	A1X283	911 aa		13.6	□□□□□ -0.23
DDX49-208	ENST00000599156	ZC3H12D	A2A288	527 aa	Known RBP	13.6	□□□□□ -0.23
DDX49-208	ENST00000599156	LIPT2	A6NK58	231 aa		13.6	□□□□□ -0.23
DDX49-208	ENST00000599156	LYNX1	G3V0Z9	82 aa		13.6	□□□□□ -0.23
DDX49-208	ENST00000599156	FAAH	O00519	579 aa		13.6	□□□□□ -0.23
DDX49-208	ENST00000599156	TRIM13	O60858	407 aa		13.6	□□□□□ -0.23
DDX49-208	ENST00000599156	AKR7A3	O95154	331 aa		13.6	□□□□□ -0.23
DDX49-208	ENST00000599156	VAMP5	O95183	116 aa		13.6	□□□□□ -0.23
DDX49-208	ENST00000599156	MSMB	P08118	114 aa		13.6	□□□□□ -0.23
DDX49-208	ENST00000599156	ADRA2A	P08913	450 aa		13.6	□□□□□ -0.23
DDX49-208	ENST00000599156	OR12D1	P0DN82	309 aa		13.6	□□□□□ -0.23
DDX49-208	ENST00000599156	LYNX1	P0DP58	116 aa		13.6	□□□□□ -0.23
DDX49-208	ENST00000599156	CBR1	P16152	277 aa		13.6	□□□□□ -0.23
DDX49-208	ENST00000599156	CREB1	P16220	341 aa		13.6	□□□□□ -0.23
DDX49-208	ENST00000599156	TACR3	P29371	465 aa		13.6	□□□□□ -0.23
DDX49-208	ENST00000599156	SH3BGR	P55822	239 aa	Predicted RBP	13.6	□□□□□ -0.23
DDX49-208	ENST00000599156	IL1RL1	Q01638	556 aa		13.6	□□□□□ -0.23
DDX49-208	ENST00000599156	PLAUR	Q03405	335 aa		13.6	□□□□□ -0.23
DDX49-208	ENST00000599156	CEACAM7	Q14002	265 aa		13.6	□□□□□ -0.23
DDX49-208	ENST00000599156	XKR7	Q5GH72	579 aa		13.6	□□□□□ -0.23
DDX49-208	ENST00000599156	C6orf136	Q5SQH8	315 aa		13.6	□□□□□ -0.23
DDX49-208	ENST00000599156	IL23R	Q5VWK5	629 aa		13.6	□□□□□ -0.23
DDX49-208	ENST00000599156	TMEM225	Q6GV28	225 aa		13.6	□□□□□ -0.23
DDX49-208	ENST00000599156	GPAT4	Q86UL3	456 aa		13.6	□□□□□ -0.23
DDX49-208	ENST00000599156	C10orf107	Q8IVU9	208 aa		13.6	□□□□□ -0.23
DDX49-208	ENST00000599156	IL17RD	Q8NFM7	739 aa		13.6	□□□□□ -0.23
DDX49-208	ENST00000599156	ROPN1L	Q96C74	230 aa		13.6	□□□□□ -0.23
DDX49-208	ENST00000599156	C1orf50	Q9BV19	199 aa		13.6	□□□□□ -0.23
DDX49-208	ENST00000599156	NELFA	Q9H3P2	528 aa		13.6	□□□□□ -0.23
DDX49-208	ENST00000599156	ZNF696	Q9H7X3	374 aa		13.6	□□□□□ -0.23
DDX49-208	ENST00000599156	SEC61A2	Q9H9S3	476 aa		13.6	□□□□□ -0.23
DDX49-208	ENST00000599156	MID2	Q9UJV3	735 aa		13.6	□□□□□ -0.23
DDX49-208	ENST00000599156		A0A096LPE4	126 aa		13.59	□□□□□ -0.23
DDX49-208	ENST00000599156		A0A1W2PPZ6	126 aa		13.59	□□□□□ -0.23
DDX49-208	ENST00000599156	CLDN24	A6NM45	220 aa		13.59	□□□□□ -0.23
DDX49-208	ENST00000599156	TMEM233	B4DJY2	109 aa		13.59	□□□□□ -0.23
DDX49-208	ENST00000599156	SKAP2	O75563	359 aa	Predicted RBP	13.59	□□□□□ -0.23
DDX49-208	ENST00000599156	TF	P02787	698 aa		13.59	□□□□□ -0.23
DDX49-208	ENST00000599156	GPR6	P46095	362 aa	Predicted RBP	13.59	□□□□□ -0.23
DDX49-208	ENST00000599156	EVX1	P49640	407 aa		13.59	□□□□□ -0.23
DDX49-208	ENST00000599156	SELENOP	P49908	381 aa		13.59	□□□□□ -0.23
DDX49-208	ENST00000599156	TUBA1B	P68363	451 aa		13.59	□□□□□ -0.23
DDX49-208	ENST00000599156	TUBA4A	P68366	448 aa		13.59	□□□□□ -0.23
DDX49-208	ENST00000599156	SLC9B1	Q4ZJI4	515 aa		13.59	□□□□□ -0.23
DDX49-208	ENST00000599156	PDLIM3	Q53GG5	364 aa	Predicted RBP	13.59	□□□□□ -0.23
DDX49-208	ENST00000599156	TUBA1A	Q71U36	451 aa		13.59	□□□□□ -0.23
DDX49-208	ENST00000599156	CMIP	Q8IY22	773 aa		13.59	□□□□□ -0.23
DDX49-208	ENST00000599156	CDK20	Q8IZL9	346 aa		13.59	□□□□□ -0.23
DDX49-208	ENST00000599156	CLEC4F	Q8N1N0	589 aa		13.59	□□□□□ -0.23
DDX49-208	ENST00000599156	FNDC5	Q8NAU1	212 aa		13.59	□□□□□ -0.23
DDX49-208	ENST00000599156	NOA1	Q8NC60	698 aa	Known RBP	13.59	□□□□□ -0.23
DDX49-208	ENST00000599156	ANKK1	Q8NFD2	765 aa		13.59	□□□□□ -0.23
DDX49-208	ENST00000599156	CLDND2	Q8NHS1	167 aa		13.59	□□□□□ -0.23
DDX49-208	ENST00000599156	CNOT9	Q92600	299 aa	Known RBP	13.59	□□□□□ -0.23
DDX49-208	ENST00000599156	ALKBH3	Q96Q83	286 aa	Predicted RBP	13.59	□□□□□ -0.23
DDX49-208	ENST00000599156	LINC00470	Q9BZP3	86 aa		13.59	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms