RNA–Protein interactions for RNA: ENST00000598201.5

SHKBP1-216, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-216ENST00000598201 KLHL1Q9NR64 748 aa15.5■□□□□ 0.07
SHKBP1-216ENST00000598201 TOR4AQ9NXH8 423 aa15.5■□□□□ 0.07
SHKBP1-216ENST00000598201 PIEZO1Q92508 2521 aa15.5■□□□□ 0.07
SHKBP1-216ENST00000598201 PCNX2A6NKB5 2137 aa15.5■□□□□ 0.07
SHKBP1-216ENST00000598201 BLOC1S5-TXNDC5H3BN57 136 aa15.5■□□□□ 0.07
SHKBP1-216ENST00000598201 SDHBP21912 280 aa15.5■□□□□ 0.07
SHKBP1-216ENST00000598201 RPS19P39019 145 aaKnown RBP15.5■□□□□ 0.07
SHKBP1-216ENST00000598201 GLRX5Q86SX6 157 aa15.5■□□□□ 0.07
SHKBP1-216ENST00000598201 GHDCQ8N2G8 530 aa15.5■□□□□ 0.07
SHKBP1-216ENST00000598201 OR52N1Q8NH53 320 aa15.5■□□□□ 0.07
SHKBP1-216ENST00000598201 NUBPLQ8TB37 319 aa15.5■□□□□ 0.07
SHKBP1-216ENST00000598201 DUSP19Q8WTR2 217 aa15.5■□□□□ 0.07
SHKBP1-216ENST00000598201 LIPHQ8WWY8 451 aa15.5■□□□□ 0.07
SHKBP1-216ENST00000598201 TAAR8Q969N4 342 aa15.5■□□□□ 0.07
SHKBP1-216ENST00000598201 DNAJA3Q96EY1 480 aa15.5■□□□□ 0.07
SHKBP1-216ENST00000598201 TM9SF2Q99805 663 aa15.5■□□□□ 0.07
SHKBP1-216ENST00000598201 KATNB1Q9BVA0 655 aa15.5■□□□□ 0.07
SHKBP1-216ENST00000598201 C6orf62Q9GZU0 229 aaPredicted RBP15.5■□□□□ 0.07
SHKBP1-216ENST00000598201 ADGRL4Q9HBW9 690 aa15.5■□□□□ 0.07
SHKBP1-216ENST00000598201 NANSQ9NR45 359 aa15.5■□□□□ 0.07
SHKBP1-216ENST00000598201 TXNL4BQ9NX01 149 aaKnown RBP15.5■□□□□ 0.07
SHKBP1-216ENST00000598201 SSR3Q9UNL2 185 aa15.5■□□□□ 0.07
SHKBP1-216ENST00000598201 CEP250Q9BV73 2442 aa15.49■□□□□ 0.07
SHKBP1-216ENST00000598201 C2orf72A6NCS6 295 aa15.49■□□□□ 0.07
SHKBP1-216ENST00000598201 ASAH2BP0C7U1 165 aa15.49■□□□□ 0.07
SHKBP1-216ENST00000598201 SLC26A5P58743 744 aa15.49■□□□□ 0.07
SHKBP1-216ENST00000598201 INAQ16352 499 aa15.49■□□□□ 0.07
SHKBP1-216ENST00000598201 ARMC4Q5T2S8 1044 aa15.49■□□□□ 0.07
SHKBP1-216ENST00000598201 C1QL3Q5VWW1 255 aa15.49■□□□□ 0.07
SHKBP1-216ENST00000598201 OR10H4Q8NGA5 316 aa15.49■□□□□ 0.07
SHKBP1-216ENST00000598201 ZPLD1Q8TCW7 415 aa15.49■□□□□ 0.07
SHKBP1-216ENST00000598201 S100ZQ8WXG8 99 aa15.49■□□□□ 0.07
SHKBP1-216ENST00000598201 UFD1Q92890 307 aa15.49■□□□□ 0.07
SHKBP1-216ENST00000598201 RASD2Q96D21 266 aa15.49■□□□□ 0.07
SHKBP1-216ENST00000598201 C12orf10Q9HB07 376 aa15.49■□□□□ 0.07
SHKBP1-216ENST00000598201 HIF3AQ9Y2N7 669 aa15.49■□□□□ 0.07
SHKBP1-216ENST00000598201 TEX51A0A1B0GUA7 166 aa15.48■□□□□ 0.07
SHKBP1-216ENST00000598201 B4DXG7 233 aa15.48■□□□□ 0.07
SHKBP1-216ENST00000598201 ZNF670-ZNF695F2Z2N8 137 aa15.48■□□□□ 0.07
SHKBP1-216ENST00000598201 GP1BAP07359 652 aa15.48■□□□□ 0.07
SHKBP1-216ENST00000598201 SBK2P0C263 348 aa15.48■□□□□ 0.07
SHKBP1-216ENST00000598201 CEACAM1P13688 526 aa15.48■□□□□ 0.07
SHKBP1-216ENST00000598201 PGCP20142 388 aa15.48■□□□□ 0.07
SHKBP1-216ENST00000598201 P2RX1P51575 399 aa15.48■□□□□ 0.07
SHKBP1-216ENST00000598201 PRPS1P60891 318 aa15.48■□□□□ 0.07
SHKBP1-216ENST00000598201 MC2RQ01718 297 aa15.48■□□□□ 0.07
SHKBP1-216ENST00000598201 OR5M10Q6IEU7 315 aa15.48■□□□□ 0.07
SHKBP1-216ENST00000598201 KLBQ86Z14 1044 aa15.48■□□□□ 0.07
SHKBP1-216ENST00000598201 LRRC75AQ8NAA5 344 aa15.48■□□□□ 0.07
SHKBP1-216ENST00000598201 NPEPL1Q8NDH3 523 aa15.48■□□□□ 0.07
SHKBP1-216ENST00000598201 OR51L1Q8NGJ5 315 aa15.48■□□□□ 0.07
SHKBP1-216ENST00000598201 ZNRF4Q8WWF5 429 aa15.48■□□□□ 0.07
SHKBP1-216ENST00000598201 GPX7Q96SL4 187 aaPredicted RBP15.48■□□□□ 0.07
SHKBP1-216ENST00000598201 NMNAT3Q96T66 252 aa15.48■□□□□ 0.07
SHKBP1-216ENST00000598201 DDOQ99489 341 aa15.48■□□□□ 0.07
SHKBP1-216ENST00000598201 ALG8Q9BVK2 526 aa15.48■□□□□ 0.07
SHKBP1-216ENST00000598201 WDR12Q9GZL7 423 aaKnown RBP15.48■□□□□ 0.07
SHKBP1-216ENST00000598201 A3GALT2U3KPV4 340 aa15.48■□□□□ 0.07
SHKBP1-216ENST00000598201 HTR3EA5X5Y0 456 aa15.48■□□□□ 0.07
SHKBP1-216ENST00000598201 ARPC3O15145 178 aa15.48■□□□□ 0.07
SHKBP1-216ENST00000598201 RPS5P46782 204 aaKnown RBP15.48■□□□□ 0.07
SHKBP1-216ENST00000598201 ACSM1Q08AH1 577 aa15.48■□□□□ 0.07
SHKBP1-216ENST00000598201 TMED1Q13445 227 aa15.48■□□□□ 0.07
SHKBP1-216ENST00000598201 CBFBQ13951 182 aa15.48■□□□□ 0.07
SHKBP1-216ENST00000598201 QPRTQ15274 297 aa15.48■□□□□ 0.07
SHKBP1-216ENST00000598201 C22orf42Q6IC83 251 aa15.48■□□□□ 0.07
SHKBP1-216ENST00000598201 GPR119Q8TDV5 335 aa15.48■□□□□ 0.07
SHKBP1-216ENST00000598201 C1GALT1C1Q96EU7 318 aa15.48■□□□□ 0.07
SHKBP1-216ENST00000598201 DCLRE1CQ96SD1 692 aaKnown RBP15.48■□□□□ 0.07
SHKBP1-216ENST00000598201 BARHL1Q9BZE3 327 aa15.48■□□□□ 0.07
SHKBP1-216ENST00000598201 HAO2Q9NYQ3 351 aa15.48■□□□□ 0.07
SHKBP1-216ENST00000598201 KLHL21Q9UJP4 597 aa15.48■□□□□ 0.07
SHKBP1-216ENST00000598201 CAB39Q9Y376 341 aaPredicted RBP15.48■□□□□ 0.07
SHKBP1-216ENST00000598201 KIF26BQ2KJY2 2108 aa15.48■□□□□ 0.07
SHKBP1-216ENST00000598201 DAPL1A0PJW8 107 aa15.47■□□□□ 0.07
SHKBP1-216ENST00000598201 OR6C68A6NDL8 312 aa15.47■□□□□ 0.07
SHKBP1-216ENST00000598201 GP1BBP13224 206 aa15.47■□□□□ 0.07
SHKBP1-216ENST00000598201 CELP19835 753 aa15.47■□□□□ 0.07
SHKBP1-216ENST00000598201 CXCR1P25024 350 aa15.47■□□□□ 0.07
SHKBP1-216ENST00000598201 UQCRC1P31930 480 aa15.47■□□□□ 0.07
SHKBP1-216ENST00000598201 RANBP1P43487 201 aa15.47■□□□□ 0.07
SHKBP1-216ENST00000598201 PSPHP78330 225 aa15.47■□□□□ 0.07
SHKBP1-216ENST00000598201 FABP5Q01469 135 aa15.47■□□□□ 0.07
SHKBP1-216ENST00000598201 CCDC157Q569K6 752 aa15.47■□□□□ 0.07
SHKBP1-216ENST00000598201 VASNQ6EMK4 673 aa15.47■□□□□ 0.07
SHKBP1-216ENST00000598201 SNX29P2Q8IUI4 249 aa15.47■□□□□ 0.07
SHKBP1-216ENST00000598201 FNDC8Q8TC99 324 aa15.47■□□□□ 0.07
SHKBP1-216ENST00000598201 SMPDL3BQ92485 455 aa15.47■□□□□ 0.07
SHKBP1-216ENST00000598201 HGDQ93099 445 aa15.47■□□□□ 0.07
SHKBP1-216ENST00000598201 ZMYND19Q96E35 227 aaPredicted RBP15.47■□□□□ 0.07
SHKBP1-216ENST00000598201 Q96M85 177 aa15.47■□□□□ 0.07
SHKBP1-216ENST00000598201 GALNT9Q9HCQ5 603 aa15.47■□□□□ 0.07
SHKBP1-216ENST00000598201 PALMDQ9NP74 551 aa15.47■□□□□ 0.07
SHKBP1-216ENST00000598201 SIRT4Q9Y6E7 314 aaPredicted RBP15.47■□□□□ 0.07
SHKBP1-216ENST00000598201 TEX13CA0A0J9YWL9 993 aa15.47■□□□□ 0.07
SHKBP1-216ENST00000598201 SPAARA0A1B0GVQ0 90 aa15.47■□□□□ 0.07
SHKBP1-216ENST00000598201 AKAP8O43823 692 aaKnown RBP15.47■□□□□ 0.07
SHKBP1-216ENST00000598201 CDC40O60508 579 aaKnown RBP eCLIP15.47■□□□□ 0.07
SHKBP1-216ENST00000598201 SERPINI2O75830 405 aa15.47■□□□□ 0.07
SHKBP1-216ENST00000598201 F13BP05160 661 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms