RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 KHKP50053 298 aa8.65□□□□□ -1.02
LIG1-209ENST00000596104 HGFACQ04756 655 aa8.65□□□□□ -1.02
LIG1-209ENST00000596104 LGALS3BPQ08380 585 aa8.65□□□□□ -1.02
LIG1-209ENST00000596104 MAD2L1Q13257 205 aaPredicted RBP8.65□□□□□ -1.02
LIG1-209ENST00000596104 CEACAM7Q14002 265 aa8.65□□□□□ -1.02
LIG1-209ENST00000596104 CASP8Q14790 479 aa8.65□□□□□ -1.02
LIG1-209ENST00000596104 SMU1Q2TAY7 513 aa8.65□□□□□ -1.02
LIG1-209ENST00000596104 C3orf36Q3SXR2 165 aa8.65□□□□□ -1.02
LIG1-209ENST00000596104 LINGO2Q7L985 606 aa8.65□□□□□ -1.02
LIG1-209ENST00000596104 ABHD12BQ7Z5M8 362 aaPredicted RBP8.65□□□□□ -1.02
LIG1-209ENST00000596104 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.65□□□□□ -1.02
LIG1-209ENST00000596104 FAM169BQ8N8A8 192 aa8.65□□□□□ -1.02
LIG1-209ENST00000596104 MAGEE2Q8TD90 523 aaPredicted RBP8.65□□□□□ -1.02
LIG1-209ENST00000596104 UBLCP1Q8WVY7 318 aaPredicted RBP8.65□□□□□ -1.02
LIG1-209ENST00000596104 HPS1Q92902 700 aa8.65□□□□□ -1.02
LIG1-209ENST00000596104 AURKBQ96GD4 344 aaPredicted RBP8.65□□□□□ -1.02
LIG1-209ENST00000596104 ZNF317Q96PQ6 595 aaPredicted RBP8.65□□□□□ -1.02
LIG1-209ENST00000596104 ALKBH3Q96Q83 286 aaPredicted RBP8.65□□□□□ -1.02
LIG1-209ENST00000596104 DOK1Q99704 481 aa8.65□□□□□ -1.02
LIG1-209ENST00000596104 KCNS3Q9BQ31 491 aa8.65□□□□□ -1.02
LIG1-209ENST00000596104 PLA2G12AQ9BZM1 189 aa8.65□□□□□ -1.02
LIG1-209ENST00000596104 ZNF442Q9H7R0 627 aa8.65□□□□□ -1.02
LIG1-209ENST00000596104 TMEM45AQ9NWC5 275 aa8.65□□□□□ -1.02
LIG1-209ENST00000596104 NOP53Q9NZM5 478 aaKnown RBP8.65□□□□□ -1.02
LIG1-209ENST00000596104 TMEM129A0AVI4 362 aa8.64□□□□□ -1.03
LIG1-209ENST00000596104 CFAP73A6NFT4 308 aa8.64□□□□□ -1.03
LIG1-209ENST00000596104 HMGN4O00479 90 aa8.64□□□□□ -1.03
LIG1-209ENST00000596104 NR5A2O00482 541 aa8.64□□□□□ -1.03
LIG1-209ENST00000596104 CPSF4O95639 269 aaKnown RBP8.64□□□□□ -1.03
LIG1-209ENST00000596104 IGKV3-15P01624 115 aa8.64□□□□□ -1.03
LIG1-209ENST00000596104 GPIP06744 558 aa8.64□□□□□ -1.03
LIG1-209ENST00000596104 DAOP14920 347 aa8.64□□□□□ -1.03
LIG1-209ENST00000596104 PAX7P23759 505 aa8.64□□□□□ -1.03
LIG1-209ENST00000596104 APEX1P27695 318 aaKnown RBP8.64□□□□□ -1.03
LIG1-209ENST00000596104 CFPP27918 469 aa8.64□□□□□ -1.03
LIG1-209ENST00000596104 SRP14P37108 136 aaKnown RBP8.64□□□□□ -1.03
LIG1-209ENST00000596104 SELENOPP49908 381 aa8.64□□□□□ -1.03
LIG1-209ENST00000596104 CHN2P52757 468 aa8.64□□□□□ -1.03
LIG1-209ENST00000596104 CDH15P55291 814 aa8.64□□□□□ -1.03
LIG1-209ENST00000596104 UBE2NP61088 152 aaKnown RBP8.64□□□□□ -1.03
LIG1-209ENST00000596104 TUBA1BP68363 451 aa8.64□□□□□ -1.03
LIG1-209ENST00000596104 TUBA4AP68366 448 aa8.64□□□□□ -1.03
LIG1-209ENST00000596104 EPS8Q12929 822 aa8.64□□□□□ -1.03
LIG1-209ENST00000596104 RIN1Q13671 783 aa8.64□□□□□ -1.03
LIG1-209ENST00000596104 OR7A5Q15622 319 aa8.64□□□□□ -1.03
LIG1-209ENST00000596104 SYPL1Q16563 259 aa8.64□□□□□ -1.03
LIG1-209ENST00000596104 GPAT3Q53EU6 434 aa8.64□□□□□ -1.03
LIG1-209ENST00000596104 VHLLQ6RSH7 139 aa8.64□□□□□ -1.03
LIG1-209ENST00000596104 TUBA1AQ71U36 451 aa8.64□□□□□ -1.03
LIG1-209ENST00000596104 MYPOPQ86VE0 399 aaPredicted RBP8.64□□□□□ -1.03
LIG1-209ENST00000596104 ZCCHC24Q8N2G6 241 aaKnown RBP8.64□□□□□ -1.03
LIG1-209ENST00000596104 ZNF786Q8N393 782 aa8.64□□□□□ -1.03
LIG1-209ENST00000596104 ANKFN1Q8N957 763 aa8.64□□□□□ -1.03
LIG1-209ENST00000596104 EIF1ADQ8N9N8 165 aaKnown RBP8.64□□□□□ -1.03
LIG1-209ENST00000596104 LINC01356Q8N9X3 169 aa8.64□□□□□ -1.03
LIG1-209ENST00000596104 NUP37Q8NFH4 326 aa8.64□□□□□ -1.03
LIG1-209ENST00000596104 OR4F15Q8NGB8 312 aa8.64□□□□□ -1.03
LIG1-209ENST00000596104 NEU4Q8WWR8 484 aaPredicted RBP8.64□□□□□ -1.03
LIG1-209ENST00000596104 TESCQ96BS2 214 aa8.64□□□□□ -1.03
LIG1-209ENST00000596104 ZIM3Q96PE6 472 aa8.64□□□□□ -1.03
LIG1-209ENST00000596104 TRNT1Q96Q11 434 aaKnown RBP8.64□□□□□ -1.03
LIG1-209ENST00000596104 DPY30Q9C005 99 aa8.64□□□□□ -1.03
LIG1-209ENST00000596104 RAB1BQ9H0U4 201 aa8.64□□□□□ -1.03
LIG1-209ENST00000596104 AKTIPQ9H8T0 292 aa8.64□□□□□ -1.03
LIG1-209ENST00000596104 MARCOQ9UEW3 520 aaPredicted RBP8.64□□□□□ -1.03
LIG1-209ENST00000596104 TMEFF2Q9UIK5 374 aaPredicted RBP8.64□□□□□ -1.03
LIG1-209ENST00000596104 FBXO9Q9UK97 447 aaPredicted RBP8.64□□□□□ -1.03
LIG1-209ENST00000596104 NUP214P35658 2090 aaPredicted RBP8.64□□□□□ -1.03
LIG1-209ENST00000596104 A0A096LPE4 126 aa8.63□□□□□ -1.03
LIG1-209ENST00000596104 A0A1W2PPZ6 126 aa8.63□□□□□ -1.03
LIG1-209ENST00000596104 ZNF587BE7ETH6 402 aa8.63□□□□□ -1.03
LIG1-209ENST00000596104 hCG_2039718K7EN88 272 aa8.63□□□□□ -1.03
LIG1-209ENST00000596104 SPAG7O75391 227 aa8.63□□□□□ -1.03
LIG1-209ENST00000596104 UPK3AO75631 287 aa8.63□□□□□ -1.03
LIG1-209ENST00000596104 KRT33AO76009 404 aa8.63□□□□□ -1.03
LIG1-209ENST00000596104 VENTXO95231 258 aa8.63□□□□□ -1.03
LIG1-209ENST00000596104 CELA3BP08861 270 aa8.63□□□□□ -1.03
LIG1-209ENST00000596104 NUDT17P0C025 328 aa8.63□□□□□ -1.03
LIG1-209ENST00000596104 THBS4P35443 961 aa8.63□□□□□ -1.03
LIG1-209ENST00000596104 DVL1P1P54792 670 aaPredicted RBP8.63□□□□□ -1.03
LIG1-209ENST00000596104 HPCAP84074 193 aa8.63□□□□□ -1.03
LIG1-209ENST00000596104 TRIP10Q15642 601 aa8.63□□□□□ -1.03
LIG1-209ENST00000596104 GSTA3Q16772 222 aa8.63□□□□□ -1.03
LIG1-209ENST00000596104 SPANXN4Q5MJ08 99 aa8.63□□□□□ -1.03
LIG1-209ENST00000596104 MRPL2Q5T653 305 aaKnown RBP8.63□□□□□ -1.03
LIG1-209ENST00000596104 ANXA8L1Q5VT79 327 aa8.63□□□□□ -1.03
LIG1-209ENST00000596104 C12orf54Q6X4T0 127 aa8.63□□□□□ -1.03
LIG1-209ENST00000596104 LRRC74BQ6ZQY2 392 aa8.63□□□□□ -1.03
LIG1-209ENST00000596104 CREB3L2Q70SY1 520 aa8.63□□□□□ -1.03
LIG1-209ENST00000596104 GPAT4Q86UL3 456 aa8.63□□□□□ -1.03
LIG1-209ENST00000596104 RNF130Q86XS8 419 aa8.63□□□□□ -1.03
LIG1-209ENST00000596104 EPHX4Q8IUS5 362 aa8.63□□□□□ -1.03
LIG1-209ENST00000596104 SVOPLQ8N434 492 aa8.63□□□□□ -1.03
LIG1-209ENST00000596104 SEMA6DQ8NFY4 1073 aa8.63□□□□□ -1.03
LIG1-209ENST00000596104 TCP10LQ8TDR4 215 aa8.63□□□□□ -1.03
LIG1-209ENST00000596104 WDR60Q8WVS4 1066 aa8.63□□□□□ -1.03
LIG1-209ENST00000596104 SNX18Q96RF0 628 aa8.63□□□□□ -1.03
LIG1-209ENST00000596104 SLC35A5Q9BS91 424 aa8.63□□□□□ -1.03
LIG1-209ENST00000596104 MTHFD2LQ9H903 347 aaPredicted RBP8.63□□□□□ -1.03
LIG1-209ENST00000596104 MOV10Q9HCE1 1003 aaKnown RBP8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms