RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 APOOQ9BUR5 198 aa12.16□□□□□ -0.46
VRK3-209ENST00000594948 REG4Q9BYZ8 158 aa12.16□□□□□ -0.46
VRK3-209ENST00000594948 NMNAT2Q9BZQ4 307 aa12.16□□□□□ -0.46
VRK3-209ENST00000594948 RNF208Q9H0X6 261 aa12.16□□□□□ -0.46
VRK3-209ENST00000594948 OR10A4Q9H209 315 aa12.16□□□□□ -0.46
VRK3-209ENST00000594948 NOX3Q9HBY0 568 aa12.16□□□□□ -0.46
VRK3-209ENST00000594948 RDH8Q9NYR8 311 aa12.16□□□□□ -0.46
VRK3-209ENST00000594948 NKIRAS2Q9NYR9 191 aa12.16□□□□□ -0.46
VRK3-209ENST00000594948 HCN3Q9P1Z3 774 aa12.16□□□□□ -0.46
VRK3-209ENST00000594948 USP36Q9P275 1121 aaKnown RBP12.16□□□□□ -0.46
VRK3-209ENST00000594948 ING1Q9UK53 422 aaPredicted RBP12.16□□□□□ -0.46
VRK3-209ENST00000594948 HMSDA8MTL9 139 aa12.16□□□□□ -0.46
VRK3-209ENST00000594948 L7N2F9 121 aa12.16□□□□□ -0.46
VRK3-209ENST00000594948 CDK2AP1O14519 115 aa12.16□□□□□ -0.46
VRK3-209ENST00000594948 GALR3O60755 368 aaPredicted RBP12.16□□□□□ -0.46
VRK3-209ENST00000594948 KHDRBS3O75525 346 aaKnown RBP12.16□□□□□ -0.46
VRK3-209ENST00000594948 B3GALNT1O75752 331 aa12.16□□□□□ -0.46
VRK3-209ENST00000594948 SCO1O75880 301 aa12.16□□□□□ -0.46
VRK3-209ENST00000594948 ADRB1P08588 477 aa12.16□□□□□ -0.46
VRK3-209ENST00000594948 ACRP10323 421 aa12.16□□□□□ -0.46
VRK3-209ENST00000594948 ITGB8P26012 769 aa12.16□□□□□ -0.46
VRK3-209ENST00000594948 CTNNB1P35222 781 aa12.16□□□□□ -0.46
VRK3-209ENST00000594948 PTGS2P35354 604 aa12.16□□□□□ -0.46
VRK3-209ENST00000594948 GPR143P51810 404 aa12.16□□□□□ -0.46
VRK3-209ENST00000594948 ZNF267Q14586 743 aaPredicted RBP12.16□□□□□ -0.46
VRK3-209ENST00000594948 DEFB134Q4QY38 66 aa12.16□□□□□ -0.46
VRK3-209ENST00000594948 FAM78AQ5JUQ0 283 aa12.16□□□□□ -0.46
VRK3-209ENST00000594948 PWWP2BQ6NUJ5 590 aa12.16□□□□□ -0.46
VRK3-209ENST00000594948 ULK3Q6PHR2 472 aa12.16□□□□□ -0.46
VRK3-209ENST00000594948 FIGNL1Q6PIW4 674 aa12.16□□□□□ -0.46
VRK3-209ENST00000594948 ZNF550Q7Z398 422 aa12.16□□□□□ -0.46
VRK3-209ENST00000594948 KCTD20Q7Z5Y7 419 aa12.16□□□□□ -0.46
VRK3-209ENST00000594948 IZUMO1Q8IYV9 350 aa12.16□□□□□ -0.46
VRK3-209ENST00000594948 OR4E2Q8NGC2 313 aa12.16□□□□□ -0.46
VRK3-209ENST00000594948 CTHRC1Q96CG8 243 aa12.16□□□□□ -0.46
VRK3-209ENST00000594948 SGTBQ96EQ0 304 aa12.16□□□□□ -0.46
VRK3-209ENST00000594948 SFXN2Q96NB2 322 aa12.16□□□□□ -0.46
VRK3-209ENST00000594948 ASB16Q96NS5 453 aa12.16□□□□□ -0.46
VRK3-209ENST00000594948 OR2M4Q96R27 311 aa12.16□□□□□ -0.46
VRK3-209ENST00000594948 LIN7BQ9HAP6 207 aa12.16□□□□□ -0.46
VRK3-209ENST00000594948 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.16□□□□□ -0.46
VRK3-209ENST00000594948 DNAJB12Q9NXW2 375 aaKnown RBP12.16□□□□□ -0.46
VRK3-209ENST00000594948 TAS2R10Q9NYW0 307 aa12.16□□□□□ -0.46
VRK3-209ENST00000594948 MOSPD1Q9UJG1 213 aa12.16□□□□□ -0.46
VRK3-209ENST00000594948 FLVCR2Q9UPI3 526 aa12.16□□□□□ -0.46
VRK3-209ENST00000594948 PRELID1Q9Y255 219 aa12.16□□□□□ -0.46
VRK3-209ENST00000594948 SESN1Q9Y6P5 492 aa12.16□□□□□ -0.46
VRK3-209ENST00000594948 C2orf16Q68DN1 1984 aa12.15□□□□□ -0.46
VRK3-209ENST00000594948 SCN2AQ99250 2005 aa12.15□□□□□ -0.46
VRK3-209ENST00000594948 MFSD2BA6NFX1 497 aa12.15□□□□□ -0.46
VRK3-209ENST00000594948 LRRC72A6NJI9 287 aa12.15□□□□□ -0.46
VRK3-209ENST00000594948 MCRIP1C9JLW8 97 aa12.15□□□□□ -0.46
VRK3-209ENST00000594948 P2RX6O15547 441 aa12.15□□□□□ -0.46
VRK3-209ENST00000594948 RGS11O94810 467 aa12.15□□□□□ -0.46
VRK3-209ENST00000594948 ALDOBP05062 364 aa12.15□□□□□ -0.46
VRK3-209ENST00000594948 NGFRP08138 427 aa12.15□□□□□ -0.46
VRK3-209ENST00000594948 HOXD4P09016 255 aaPredicted RBP12.15□□□□□ -0.46
VRK3-209ENST00000594948 HOXC4P09017 264 aaPredicted RBP12.15□□□□□ -0.46
VRK3-209ENST00000594948 ACSM4P0C7M7 580 aa12.15□□□□□ -0.46
VRK3-209ENST00000594948 NFYAP23511 347 aaPredicted RBP12.15□□□□□ -0.46
VRK3-209ENST00000594948 MAPK3P27361 379 aaPredicted RBP12.15□□□□□ -0.46
VRK3-209ENST00000594948 GABRA3P34903 492 aa12.15□□□□□ -0.46
VRK3-209ENST00000594948 RAD52P43351 418 aa12.15□□□□□ -0.46
VRK3-209ENST00000594948 P2RX1P51575 399 aa12.15□□□□□ -0.46
VRK3-209ENST00000594948 HCCSP53701 268 aa12.15□□□□□ -0.46
VRK3-209ENST00000594948 PSMA6P60900 246 aaKnown RBP12.15□□□□□ -0.46
VRK3-209ENST00000594948 ALG10BQ5I7T1 473 aa12.15□□□□□ -0.46
VRK3-209ENST00000594948 TMEM255AQ5JRV8 349 aa12.15□□□□□ -0.46
VRK3-209ENST00000594948 HES5Q5TA89 166 aa12.15□□□□□ -0.46
VRK3-209ENST00000594948 FCRLAQ7L513 359 aa12.15□□□□□ -0.46
VRK3-209ENST00000594948 OVCH2Q7RTZ1 564 aa12.15□□□□□ -0.46
VRK3-209ENST00000594948 NAXDQ8IW45 347 aa12.15□□□□□ -0.46
VRK3-209ENST00000594948 ARL14Q8N4G2 192 aa12.15□□□□□ -0.46
VRK3-209ENST00000594948 MEIOBQ8N635 442 aa12.15□□□□□ -0.46
VRK3-209ENST00000594948 OR4K13Q8NH42 304 aa12.15□□□□□ -0.46
VRK3-209ENST00000594948 ZCCHC10Q8TBK6 192 aa12.15□□□□□ -0.46
VRK3-209ENST00000594948 ZNF296Q8WUU4 475 aaPredicted RBP12.15□□□□□ -0.46
VRK3-209ENST00000594948 ASB13Q8WXK3 278 aa12.15□□□□□ -0.46
VRK3-209ENST00000594948 SMARCD2Q92925 531 aa12.15□□□□□ -0.46
VRK3-209ENST00000594948 FAM131CQ96AQ9 280 aa12.15□□□□□ -0.46
VRK3-209ENST00000594948 MIB2Q96AX9 1013 aa12.15□□□□□ -0.46
VRK3-209ENST00000594948 LMF2Q9BU23 707 aaKnown RBP12.15□□□□□ -0.46
VRK3-209ENST00000594948 SLITRK2Q9H156 845 aa12.15□□□□□ -0.46
VRK3-209ENST00000594948 BEX1Q9HBH7 125 aa12.15□□□□□ -0.46
VRK3-209ENST00000594948 MKKSQ9NPJ1 570 aaPredicted RBP12.15□□□□□ -0.46
VRK3-209ENST00000594948 GLS2Q9UI32 602 aa12.15□□□□□ -0.46
VRK3-209ENST00000594948 PILRAQ9UKJ1 303 aa12.15□□□□□ -0.46
VRK3-209ENST00000594948 PPIEQ9UNP9 301 aaKnown RBP12.15□□□□□ -0.46
VRK3-209ENST00000594948 EML5Q05BV3 1969 aa12.15□□□□□ -0.47
VRK3-209ENST00000594948 GOLGA4Q13439 2230 aaKnown RBP12.14□□□□□ -0.47
VRK3-209ENST00000594948 A0A1W2PP55 124 aa12.14□□□□□ -0.47
VRK3-209ENST00000594948 CXCL2P19875 107 aa12.14□□□□□ -0.47
VRK3-209ENST00000594948 FAUP35544 74 aaKnown RBP12.14□□□□□ -0.47
VRK3-209ENST00000594948 NAA10P41227 235 aaPredicted RBP12.14□□□□□ -0.47
VRK3-209ENST00000594948 ART1P52961 327 aa12.14□□□□□ -0.47
VRK3-209ENST00000594948 SNRPNP63162 240 aaKnown RBP12.14□□□□□ -0.47
VRK3-209ENST00000594948 STX4Q12846 297 aa12.14□□□□□ -0.47
VRK3-209ENST00000594948 COL9A2Q14055 689 aaPredicted RBP12.14□□□□□ -0.47
VRK3-209ENST00000594948 DEFB115Q30KQ5 88 aa12.14□□□□□ -0.47
VRK3-209ENST00000594948 MANEAQ5SRI9 462 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms