RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 ZCCHC4Q9H5U6 513 aa15.15■□□□□ 0.02
LIG1-206ENST00000594067 METTL17Q9H7H0 456 aaPredicted RBP15.15■□□□□ 0.02
LIG1-206ENST00000594067 AUNIPQ9H7T9 357 aa15.15■□□□□ 0.02
LIG1-206ENST00000594067 PRDM9Q9NQV7 894 aa15.15■□□□□ 0.02
LIG1-206ENST00000594067 MRPL15Q9P015 296 aaKnown RBP15.15■□□□□ 0.02
LIG1-206ENST00000594067 ABRACLQ9P1F3 81 aa15.15■□□□□ 0.02
LIG1-206ENST00000594067 CHRNA9Q9UGM1 479 aa15.15■□□□□ 0.02
LIG1-206ENST00000594067 CAMK2AQ9UQM7 478 aa15.15■□□□□ 0.02
LIG1-206ENST00000594067 TRBV2A0A0J9YWF9 115 aa15.14■□□□□ 0.01
LIG1-206ENST00000594067 OR10H2O60403 315 aa15.14■□□□□ 0.01
LIG1-206ENST00000594067 GALR3O60755 368 aaPredicted RBP15.14■□□□□ 0.01
LIG1-206ENST00000594067 EDNRAP25101 427 aa15.14■□□□□ 0.01
LIG1-206ENST00000594067 SIRPAP78324 504 aa15.14■□□□□ 0.01
LIG1-206ENST00000594067 DYRK1AQ13627 763 aa15.14■□□□□ 0.01
LIG1-206ENST00000594067 GPAT4Q86UL3 456 aa15.14■□□□□ 0.01
LIG1-206ENST00000594067 CDH24Q86UP0 819 aa15.14■□□□□ 0.01
LIG1-206ENST00000594067 SLC35F2Q8IXU6 374 aa15.14■□□□□ 0.01
LIG1-206ENST00000594067 LGALS14Q8TCE9 139 aa15.14■□□□□ 0.01
LIG1-206ENST00000594067 CTHRC1Q96CG8 243 aa15.14■□□□□ 0.01
LIG1-206ENST00000594067 ZNF426Q9BUY5 554 aa15.14■□□□□ 0.01
LIG1-206ENST00000594067 NKIRAS2Q9NYR9 191 aa15.14■□□□□ 0.01
LIG1-206ENST00000594067 WSB2Q9NYS7 404 aaPredicted RBP15.14■□□□□ 0.01
LIG1-206ENST00000594067 MAB21L2Q9Y586 359 aa15.14■□□□□ 0.01
LIG1-206ENST00000594067 TRIM77I1YAP6 450 aa15.14■□□□□ 0.01
LIG1-206ENST00000594067 RDH16O75452 317 aa15.14■□□□□ 0.01
LIG1-206ENST00000594067 ARL6IP5O75915 188 aa15.14■□□□□ 0.01
LIG1-206ENST00000594067 ADRB1P08588 477 aa15.14■□□□□ 0.01
LIG1-206ENST00000594067 HOXB2P14652 356 aa15.14■□□□□ 0.01
LIG1-206ENST00000594067 PTGS2P35354 604 aa15.14■□□□□ 0.01
LIG1-206ENST00000594067 RAB14P61106 215 aa15.14■□□□□ 0.01
LIG1-206ENST00000594067 PSG6Q00889 435 aa15.14■□□□□ 0.01
LIG1-206ENST00000594067 ZSWIM7Q19AV6 140 aa15.14■□□□□ 0.01
LIG1-206ENST00000594067 NDUFAF6Q330K2 333 aa15.14■□□□□ 0.01
LIG1-206ENST00000594067 KIRREL2Q6UWL6 708 aa15.14■□□□□ 0.01
LIG1-206ENST00000594067 FTMTQ8N4E7 242 aa15.14■□□□□ 0.01
LIG1-206ENST00000594067 GCDHQ92947 438 aaPredicted RBP15.14■□□□□ 0.01
LIG1-206ENST00000594067 DERL3Q96Q80 235 aa15.14■□□□□ 0.01
LIG1-206ENST00000594067 TRIM2Q9C040 744 aa15.14■□□□□ 0.01
LIG1-206ENST00000594067 C20orf85Q9H1P6 137 aa15.14■□□□□ 0.01
LIG1-206ENST00000594067 ZNF275Q9NSD4 429 aaPredicted RBP15.14■□□□□ 0.01
LIG1-206ENST00000594067 SERTAD3Q9UJW9 196 aa15.14■□□□□ 0.01
LIG1-206ENST00000594067 COPS3Q9UNS2 423 aa15.14■□□□□ 0.01
LIG1-206ENST00000594067 FLVCR2Q9UPI3 526 aa15.14■□□□□ 0.01
LIG1-206ENST00000594067 A0A1W2PPL8 197 aa15.13■□□□□ 0.01
LIG1-206ENST00000594067 A0A1W2PQF6 199 aa15.13■□□□□ 0.01
LIG1-206ENST00000594067 HCRTR1O43613 425 aa15.13■□□□□ 0.01
LIG1-206ENST00000594067 GSTZ1O43708 216 aaPredicted RBP15.13■□□□□ 0.01
LIG1-206ENST00000594067 SELENOFO60613 162 aa15.13■□□□□ 0.01
LIG1-206ENST00000594067 NDUFB2O95178 105 aa15.13■□□□□ 0.01
LIG1-206ENST00000594067 UCHL1P09936 223 aa15.13■□□□□ 0.01
LIG1-206ENST00000594067 OR2T7P0C7T2 308 aa15.13■□□□□ 0.01
LIG1-206ENST00000594067 NAT1P18440 290 aa15.13■□□□□ 0.01
LIG1-206ENST00000594067 LCN1P31025 176 aa15.13■□□□□ 0.01
LIG1-206ENST00000594067 PPP1CAP62136 330 aa15.13■□□□□ 0.01
LIG1-206ENST00000594067 PRSS42Q7Z5A4 293 aa15.13■□□□□ 0.01
LIG1-206ENST00000594067 CSNK1A1LQ8N752 337 aa15.13■□□□□ 0.01
LIG1-206ENST00000594067 OR2T27Q8NH04 317 aa15.13■□□□□ 0.01
LIG1-206ENST00000594067 RBPMSQ93062 196 aaKnown RBP15.13■□□□□ 0.01
LIG1-206ENST00000594067 WBP1Q96G27 269 aa15.13■□□□□ 0.01
LIG1-206ENST00000594067 SPRTNQ9H040 489 aaPredicted RBP15.13■□□□□ 0.01
LIG1-206ENST00000594067 USP34Q70CQ2 3546 aa15.13■□□□□ 0.01
LIG1-206ENST00000594067 A8MUA0 341 aa15.13■□□□□ 0.01
LIG1-206ENST00000594067 IDSB3KWA1 339 aa15.13■□□□□ 0.01
LIG1-206ENST00000594067 M0R233 179 aa15.13■□□□□ 0.01
LIG1-206ENST00000594067 HRKO00198 91 aa15.13■□□□□ 0.01
LIG1-206ENST00000594067 PSMD9O00233 223 aa15.13■□□□□ 0.01
LIG1-206ENST00000594067 GMDSO60547 372 aa15.13■□□□□ 0.01
LIG1-206ENST00000594067 PEX14O75381 377 aa15.13■□□□□ 0.01
LIG1-206ENST00000594067 CTSBP07858 339 aa15.13■□□□□ 0.01
LIG1-206ENST00000594067 RPL4P36578 427 aaKnown RBP15.13■□□□□ 0.01
LIG1-206ENST00000594067 RBM34P42696 430 aaKnown RBP15.13■□□□□ 0.01
LIG1-206ENST00000594067 MAGEB1P43366 347 aa15.13■□□□□ 0.01
LIG1-206ENST00000594067 TNFRSF4P43489 277 aa15.13■□□□□ 0.01
LIG1-206ENST00000594067 CAPZA2P47755 286 aa15.13■□□□□ 0.01
LIG1-206ENST00000594067 RPL6Q02878 288 aaKnown RBP15.13■□□□□ 0.01
LIG1-206ENST00000594067 TFF2Q03403 129 aa15.13■□□□□ 0.01
LIG1-206ENST00000594067 SFRP4Q6FHJ7 346 aaPredicted RBP15.13■□□□□ 0.01
LIG1-206ENST00000594067 Q6ZTK2 550 aa15.13■□□□□ 0.01
LIG1-206ENST00000594067 KANSL1Q7Z3B3 1105 aa15.13■□□□□ 0.01
LIG1-206ENST00000594067 ZNF761Q86XN6 746 aaPredicted RBP15.13■□□□□ 0.01
LIG1-206ENST00000594067 UXS1Q8NBZ7 420 aa15.13■□□□□ 0.01
LIG1-206ENST00000594067 OR11G2Q8NGC1 345 aa15.13■□□□□ 0.01
LIG1-206ENST00000594067 OR2T4Q8NH00 348 aa15.13■□□□□ 0.01
LIG1-206ENST00000594067 BAHD1Q8TBE0 780 aaPredicted RBP15.13■□□□□ 0.01
LIG1-206ENST00000594067 ZPLD1Q8TCW7 415 aa15.13■□□□□ 0.01
LIG1-206ENST00000594067 SMIM4Q8WVI0 70 aa15.13■□□□□ 0.01
LIG1-206ENST00000594067 SIPA1Q96FS4 1042 aa15.13■□□□□ 0.01
LIG1-206ENST00000594067 NMNAT3Q96T66 252 aa15.13■□□□□ 0.01
LIG1-206ENST00000594067 SPATA2Q9UM82 520 aa15.13■□□□□ 0.01
LIG1-206ENST00000594067 ICAM5Q9UMF0 924 aa15.13■□□□□ 0.01
LIG1-206ENST00000594067 PPIEQ9UNP9 301 aaKnown RBP15.13■□□□□ 0.01
LIG1-206ENST00000594067 TRANK1O15050 2925 aa15.13■□□□□ 0.01
LIG1-206ENST00000594067 KLF8O95600 359 aaPredicted RBP15.12■□□□□ 0.01
LIG1-206ENST00000594067 HRGP04196 525 aa15.12■□□□□ 0.01
LIG1-206ENST00000594067 GDNFP39905 211 aa15.12■□□□□ 0.01
LIG1-206ENST00000594067 BLVRAP53004 296 aa15.12■□□□□ 0.01
LIG1-206ENST00000594067 ACTA2P62736 377 aa15.12■□□□□ 0.01
LIG1-206ENST00000594067 ACTG2P63267 376 aa15.12■□□□□ 0.01
LIG1-206ENST00000594067 NNATQ16517 81 aa15.12■□□□□ 0.01
LIG1-206ENST00000594067 DEFB110Q30KQ9 67 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms