RNA–Protein interactions for RNA: ENST00000588745.5

SMAD4-205, Transcript of SMAD family member 4, humanhuman

TSL 5 BASIC

Gene SMAD4, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-205ENST00000588745 FTCDNL1E5RQL4 147 aa10.31□□□□□ -0.76
SMAD4-205ENST00000588745 DLL1O00548 723 aa10.31□□□□□ -0.76
SMAD4-205ENST00000588745 ARPC3O15145 178 aa10.31□□□□□ -0.76
SMAD4-205ENST00000588745 OR2T1O43869 369 aa10.31□□□□□ -0.76
SMAD4-205ENST00000588745 TRIM3O75382 744 aaPredicted RBP10.31□□□□□ -0.76
SMAD4-205ENST00000588745 FADS2O95864 444 aaKnown RBP10.31□□□□□ -0.76
SMAD4-205ENST00000588745 IFNGP01579 166 aa10.31□□□□□ -0.76
SMAD4-205ENST00000588745 STSP08842 583 aa10.31□□□□□ -0.76
SMAD4-205ENST00000588745 TSPAN19P0C672 248 aa10.31□□□□□ -0.76
SMAD4-205ENST00000588745 PEPDP12955 493 aa10.31□□□□□ -0.76
SMAD4-205ENST00000588745 ZNF3P17036 446 aa10.31□□□□□ -0.76
SMAD4-205ENST00000588745 HK1P19367 917 aa10.31□□□□□ -0.76
SMAD4-205ENST00000588745 ADH6P28332 368 aa10.31□□□□□ -0.76
SMAD4-205ENST00000588745 NOS3P29474 1203 aa10.31□□□□□ -0.76
SMAD4-205ENST00000588745 AQP2P41181 271 aa10.31□□□□□ -0.76
SMAD4-205ENST00000588745 EIF1P41567 113 aaKnown RBP10.31□□□□□ -0.76
SMAD4-205ENST00000588745 DNASE1L1P49184 302 aa10.31□□□□□ -0.76
SMAD4-205ENST00000588745 RRADP55042 308 aa10.31□□□□□ -0.76
SMAD4-205ENST00000588745 CDH11P55287 796 aa10.31□□□□□ -0.76
SMAD4-205ENST00000588745 EMX1Q04741 257 aaPredicted RBP10.31□□□□□ -0.76
SMAD4-205ENST00000588745 ST3GAL4Q11206 333 aa10.31□□□□□ -0.76
SMAD4-205ENST00000588745 SRSF6Q13247 344 aaKnown RBP10.31□□□□□ -0.76
SMAD4-205ENST00000588745 CLN3Q13286 438 aa10.31□□□□□ -0.76
SMAD4-205ENST00000588745 PMS2P3Q13401 168 aa10.31□□□□□ -0.76
SMAD4-205ENST00000588745 RAB39AQ14964 217 aa10.31□□□□□ -0.76
SMAD4-205ENST00000588745 TBCEQ15813 527 aaPredicted RBP10.31□□□□□ -0.76
SMAD4-205ENST00000588745 SGCBQ16585 318 aa10.31□□□□□ -0.76
SMAD4-205ENST00000588745 TBC1D25Q3MII6 688 aa10.31□□□□□ -0.76
SMAD4-205ENST00000588745 ALG10Q5BKT4 473 aa10.31□□□□□ -0.76
SMAD4-205ENST00000588745 SLC35F1Q5T1Q4 408 aa10.31□□□□□ -0.76
SMAD4-205ENST00000588745 TIGD3Q6B0B8 471 aa10.31□□□□□ -0.76
SMAD4-205ENST00000588745 C3orf33Q6P1S2 294 aa10.31□□□□□ -0.76
SMAD4-205ENST00000588745 CXXC5Q7LFL8 322 aaKnown RBP10.31□□□□□ -0.76
SMAD4-205ENST00000588745 GPR141Q7Z602 305 aa10.31□□□□□ -0.76
SMAD4-205ENST00000588745 GID4Q8IVV7 300 aa10.31□□□□□ -0.76
SMAD4-205ENST00000588745 GALNT16Q8N428 558 aa10.31□□□□□ -0.76
SMAD4-205ENST00000588745 RFKQ969G6 155 aa10.31□□□□□ -0.76
SMAD4-205ENST00000588745 MUL1Q969V5 352 aa10.31□□□□□ -0.76
SMAD4-205ENST00000588745 TMIGD2Q96BF3 282 aa10.31□□□□□ -0.76
SMAD4-205ENST00000588745 ERMAPQ96PL5 475 aaPredicted RBP10.31□□□□□ -0.76
SMAD4-205ENST00000588745 TUBA1CQ9BQE3 449 aa10.31□□□□□ -0.76
SMAD4-205ENST00000588745 UTP23Q9BRU9 249 aaKnown RBP10.31□□□□□ -0.76
SMAD4-205ENST00000588745 TAPBPLQ9BX59 468 aa10.31□□□□□ -0.76
SMAD4-205ENST00000588745 TIMMDC1Q9NPL8 285 aa10.31□□□□□ -0.76
SMAD4-205ENST00000588745 SERINC1Q9NRX5 453 aa10.31□□□□□ -0.76
SMAD4-205ENST00000588745 LRFN1Q9P244 771 aa10.31□□□□□ -0.76
SMAD4-205ENST00000588745 KLHL21Q9UJP4 597 aa10.31□□□□□ -0.76
SMAD4-205ENST00000588745 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.31□□□□□ -0.76
SMAD4-205ENST00000588745 EML6Q6ZMW3 1958 aa10.31□□□□□ -0.76
SMAD4-205ENST00000588745 A0A0G2JMM0 328 aa10.3□□□□□ -0.76
SMAD4-205ENST00000588745 A0A1W2PPB8 328 aa10.3□□□□□ -0.76
SMAD4-205ENST00000588745 A0A1W2PRS3 328 aa10.3□□□□□ -0.76
SMAD4-205ENST00000588745 KIR3DP1A8MWS1 328 aa10.3□□□□□ -0.76
SMAD4-205ENST00000588745 BLOC1S5-TXNDC5H3BN57 136 aa10.3□□□□□ -0.76
SMAD4-205ENST00000588745 CDK2AP1O14519 115 aa10.3□□□□□ -0.76
SMAD4-205ENST00000588745 NKX2-8O15522 239 aa10.3□□□□□ -0.76
SMAD4-205ENST00000588745 IDH3BO43837 385 aa10.3□□□□□ -0.76
SMAD4-205ENST00000588745 NEURL1O76050 574 aa10.3□□□□□ -0.76
SMAD4-205ENST00000588745 HIST1H2ABP04908 130 aa10.3□□□□□ -0.76
SMAD4-205ENST00000588745 APEHP13798 732 aaKnown RBP10.3□□□□□ -0.76
SMAD4-205ENST00000588745 DPP4P27487 766 aa10.3□□□□□ -0.76
SMAD4-205ENST00000588745 C21orf33P30042 268 aaPredicted RBP10.3□□□□□ -0.76
SMAD4-205ENST00000588745 GRPRP30550 384 aa10.3□□□□□ -0.76
SMAD4-205ENST00000588745 IDUAP35475 653 aa10.3□□□□□ -0.76
SMAD4-205ENST00000588745 CD96P40200 585 aa10.3□□□□□ -0.76
SMAD4-205ENST00000588745 MAP2K4P45985 399 aa10.3□□□□□ -0.76
SMAD4-205ENST00000588745 DSCR4P56555 118 aaPredicted RBP10.3□□□□□ -0.76
SMAD4-205ENST00000588745 SOX8P57073 446 aa10.3□□□□□ -0.76
SMAD4-205ENST00000588745 RPL18Q07020 188 aaKnown RBP10.3□□□□□ -0.76
SMAD4-205ENST00000588745 SELENBP1Q13228 472 aa10.3□□□□□ -0.76
SMAD4-205ENST00000588745 TUBA3CQ13748 450 aa10.3□□□□□ -0.76
SMAD4-205ENST00000588745 CRMP1Q14194 572 aa10.3□□□□□ -0.76
SMAD4-205ENST00000588745 MFSD13AQ14CX5 517 aa10.3□□□□□ -0.76
SMAD4-205ENST00000588745 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.3□□□□□ -0.76
SMAD4-205ENST00000588745 SLC6A19Q695T7 634 aa10.3□□□□□ -0.76
SMAD4-205ENST00000588745 NIPAL3Q6P499 406 aa10.3□□□□□ -0.76
SMAD4-205ENST00000588745 PLBD1Q6P4A8 553 aa10.3□□□□□ -0.76
SMAD4-205ENST00000588745 TUBA3EQ6PEY2 450 aa10.3□□□□□ -0.76
SMAD4-205ENST00000588745 BORAQ6PGQ7 559 aa10.3□□□□□ -0.76
SMAD4-205ENST00000588745 CCDC81Q6ZN84 652 aa10.3□□□□□ -0.76
SMAD4-205ENST00000588745 HIST3H2AQ7L7L0 130 aa10.3□□□□□ -0.76
SMAD4-205ENST00000588745 CPOQ8IVL8 374 aa10.3□□□□□ -0.76
SMAD4-205ENST00000588745 GTPBP8Q8N3Z3 284 aaPredicted RBP10.3□□□□□ -0.76
SMAD4-205ENST00000588745 BBS1Q8NFJ9 593 aa10.3□□□□□ -0.76
SMAD4-205ENST00000588745 OR5J2Q8NH18 312 aa10.3□□□□□ -0.76
SMAD4-205ENST00000588745 C9orf43Q8TAL5 461 aaPredicted RBP10.3□□□□□ -0.76
SMAD4-205ENST00000588745 SLC25A43Q8WUT9 341 aaPredicted RBP10.3□□□□□ -0.76
SMAD4-205ENST00000588745 FAR1Q8WVX9 515 aa10.3□□□□□ -0.76
SMAD4-205ENST00000588745 HIST1H2ACQ93077 130 aa10.3□□□□□ -0.76
SMAD4-205ENST00000588745 SLC25A36Q96CQ1 311 aa10.3□□□□□ -0.76
SMAD4-205ENST00000588745 DNAJA3Q96EY1 480 aa10.3□□□□□ -0.76
SMAD4-205ENST00000588745 JSRP1Q96MG2 331 aaPredicted RBP10.3□□□□□ -0.76
SMAD4-205ENST00000588745 KATNB1Q9BVA0 655 aa10.3□□□□□ -0.76
SMAD4-205ENST00000588745 ASPNQ9BXN1 380 aa10.3□□□□□ -0.76
SMAD4-205ENST00000588745 POTEKPQ9BYX7 375 aa10.3□□□□□ -0.76
SMAD4-205ENST00000588745 RBM38Q9H0Z9 239 aaKnown RBP10.3□□□□□ -0.76
SMAD4-205ENST00000588745 ACOT13Q9NPJ3 140 aa10.3□□□□□ -0.76
SMAD4-205ENST00000588745 DKKL1Q9UK85 242 aa10.3□□□□□ -0.76
SMAD4-205ENST00000588745 ADAM18Q9Y3Q7 739 aa10.3□□□□□ -0.76
SMAD4-205ENST00000588745 IER3IP1Q9Y5U9 82 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms