RNA–Protein interactions for RNA: ENST00000588200.1

PKN1-211, Transcript of protein kinase N1, humanhuman

TSL 3

Gene PKN1, Length 548 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKN1-211ENST00000588200 SLC22A25Q6T423 547 aa11.69□□□□□ -0.54
PKN1-211ENST00000588200 ABHD12BQ7Z5M8 362 aaPredicted RBP11.69□□□□□ -0.54
PKN1-211ENST00000588200 FBXL14Q8N1E6 418 aa11.69□□□□□ -0.54
PKN1-211ENST00000588200 PIAS4Q8N2W9 510 aaPredicted RBP11.69□□□□□ -0.54
PKN1-211ENST00000588200 FAM169BQ8N8A8 192 aa11.69□□□□□ -0.54
PKN1-211ENST00000588200 ANKK1Q8NFD2 765 aa11.69□□□□□ -0.54
PKN1-211ENST00000588200 OR52E4Q8NGH9 312 aa11.69□□□□□ -0.54
PKN1-211ENST00000588200 MAGEE2Q8TD90 523 aaPredicted RBP11.69□□□□□ -0.54
PKN1-211ENST00000588200 CACNG6Q9BXT2 260 aa11.69□□□□□ -0.54
PKN1-211ENST00000588200 FKRPQ9H9S5 495 aa11.69□□□□□ -0.54
PKN1-211ENST00000588200 MOV10Q9HCE1 1003 aaKnown RBP11.69□□□□□ -0.54
PKN1-211ENST00000588200 KCNK9Q9NPC2 374 aa11.69□□□□□ -0.54
PKN1-211ENST00000588200 UPB1Q9UBR1 384 aa11.69□□□□□ -0.54
PKN1-211ENST00000588200 ANK2Q01484 3957 aa11.69□□□□□ -0.54
PKN1-211ENST00000588200 A0A0G2JPF8 293 aa11.68□□□□□ -0.54
PKN1-211ENST00000588200 HNRNPCL2B2RXH8 293 aa11.68□□□□□ -0.54
PKN1-211ENST00000588200 HNRNPCL3B7ZW38 293 aa11.68□□□□□ -0.54
PKN1-211ENST00000588200 KLF11O14901 512 aa11.68□□□□□ -0.54
PKN1-211ENST00000588200 HNRNPCL1O60812 293 aaKnown RBP11.68□□□□□ -0.54
PKN1-211ENST00000588200 WNT11O96014 354 aa11.68□□□□□ -0.54
PKN1-211ENST00000588200 CSF3P09919 207 aa11.68□□□□□ -0.54
PKN1-211ENST00000588200 HNRNPCL4P0DMR1 293 aa11.68□□□□□ -0.54
PKN1-211ENST00000588200 HOXB1P14653 301 aaPredicted RBP11.68□□□□□ -0.54
PKN1-211ENST00000588200 CXCR1P25024 350 aa11.68□□□□□ -0.54
PKN1-211ENST00000588200 ZNF83P51522 516 aa11.68□□□□□ -0.54
PKN1-211ENST00000588200 PRPS1P60891 318 aa11.68□□□□□ -0.54
PKN1-211ENST00000588200 OTUD3Q5T2D3 398 aaPredicted RBP11.68□□□□□ -0.54
PKN1-211ENST00000588200 HHATQ5VTY9 493 aa11.68□□□□□ -0.54
PKN1-211ENST00000588200 ATG16L1Q676U5 607 aa11.68□□□□□ -0.54
PKN1-211ENST00000588200 CASP12Q6UXS9 341 aa11.68□□□□□ -0.54
PKN1-211ENST00000588200 B3GLCTQ6Y288 498 aa11.68□□□□□ -0.54
PKN1-211ENST00000588200 OR9K2Q8NGE7 335 aa11.68□□□□□ -0.54
PKN1-211ENST00000588200 OR52P1PQ8NH57 321 aa11.68□□□□□ -0.54
PKN1-211ENST00000588200 STK35Q8TDR2 534 aa11.68□□□□□ -0.54
PKN1-211ENST00000588200 SLC38A5Q8WUX1 472 aa11.68□□□□□ -0.54
PKN1-211ENST00000588200 PROX1Q92786 737 aa11.68□□□□□ -0.54
PKN1-211ENST00000588200 TNFRSF13CQ96RJ3 184 aa11.68□□□□□ -0.54
PKN1-211ENST00000588200 WDR55Q9H6Y2 383 aaPredicted RBP11.68□□□□□ -0.54
PKN1-211ENST00000588200 TPT1P8Q9HAU6 139 aa11.68□□□□□ -0.54
PKN1-211ENST00000588200 C12orf10Q9HB07 376 aa11.68□□□□□ -0.54
PKN1-211ENST00000588200 BCL2L10Q9HD36 194 aa11.68□□□□□ -0.54
PKN1-211ENST00000588200 SLC6A13Q9NSD5 602 aa11.68□□□□□ -0.54
PKN1-211ENST00000588200 RLIMQ9NVW2 624 aa11.68□□□□□ -0.54
PKN1-211ENST00000588200 IFT52Q9Y366 437 aa11.68□□□□□ -0.54
PKN1-211ENST00000588200 CHST2Q9Y4C5 530 aa11.68□□□□□ -0.54
PKN1-211ENST00000588200 GMEB1Q9Y692 573 aa11.68□□□□□ -0.54
PKN1-211ENST00000588200 IGHV4-30-2A0A087WSY4 118 aa11.67□□□□□ -0.54
PKN1-211ENST00000588200 TMEM229AB2RXF0 380 aa11.67□□□□□ -0.54
PKN1-211ENST00000588200 SSX4O60224 188 aa11.67□□□□□ -0.54
PKN1-211ENST00000588200 GSNP06396 782 aa11.67□□□□□ -0.54
PKN1-211ENST00000588200 FABP6P51161 128 aa11.67□□□□□ -0.54
PKN1-211ENST00000588200 EFNA4P52798 201 aa11.67□□□□□ -0.54
PKN1-211ENST00000588200 NUDT6P53370 316 aa11.67□□□□□ -0.54
PKN1-211ENST00000588200 COPZ1P61923 177 aa11.67□□□□□ -0.54
PKN1-211ENST00000588200 VLDLRP98155 873 aa11.67□□□□□ -0.54
PKN1-211ENST00000588200 CHRNB3Q05901 458 aa11.67□□□□□ -0.54
PKN1-211ENST00000588200 CEACAM7Q14002 265 aa11.67□□□□□ -0.54
PKN1-211ENST00000588200 LARS2Q15031 903 aaKnown RBP11.67□□□□□ -0.54
PKN1-211ENST00000588200 RAB35Q15286 201 aa11.67□□□□□ -0.54
PKN1-211ENST00000588200 SWI5Q1ZZU3 235 aa11.67□□□□□ -0.54
PKN1-211ENST00000588200 PODNL1Q6PEZ8 512 aa11.67□□□□□ -0.54
PKN1-211ENST00000588200 CLEC2AQ6UVW9 174 aa11.67□□□□□ -0.54
PKN1-211ENST00000588200 ZNF836Q6ZNA1 936 aa11.67□□□□□ -0.54
PKN1-211ENST00000588200 CREB3L2Q70SY1 520 aa11.67□□□□□ -0.54
PKN1-211ENST00000588200 HMGN2P46Q86SG4 172 aa11.67□□□□□ -0.54
PKN1-211ENST00000588200 TMEM99Q8N816 258 aa11.67□□□□□ -0.54
PKN1-211ENST00000588200 MAPK1IP1LQ8NDC0 245 aa11.67□□□□□ -0.54
PKN1-211ENST00000588200 ITCHQ96J02 903 aa11.67□□□□□ -0.54
PKN1-211ENST00000588200 ZNF385AQ96PM9 386 aaKnown RBP11.67□□□□□ -0.54
PKN1-211ENST00000588200 SPATA9Q9BWV2 254 aa11.67□□□□□ -0.54
PKN1-211ENST00000588200 LINC00470Q9BZP3 86 aa11.67□□□□□ -0.54
PKN1-211ENST00000588200 ARMC7Q9H6L4 198 aa11.67□□□□□ -0.54
PKN1-211ENST00000588200 RMND5AQ9H871 391 aa11.67□□□□□ -0.54
PKN1-211ENST00000588200 CRNNQ9UBG3 495 aaPredicted RBP11.67□□□□□ -0.54
PKN1-211ENST00000588200 POU2F3Q9UKI9 436 aa11.67□□□□□ -0.54
PKN1-211ENST00000588200 ZNF232Q9UNY5 417 aa11.67□□□□□ -0.54
PKN1-211ENST00000588200 RASD1Q9Y272 281 aa11.67□□□□□ -0.54
PKN1-211ENST00000588200 ARPC4-TTLL3A0A0A6YYG9 625 aa11.66□□□□□ -0.54
PKN1-211ENST00000588200 LOC102725191A0A1B0GVB3 256 aa11.66□□□□□ -0.54
PKN1-211ENST00000588200 TMEM120BA0PK00 339 aa11.66□□□□□ -0.54
PKN1-211ENST00000588200 A8MV72 311 aaPredicted RBP11.66□□□□□ -0.54
PKN1-211ENST00000588200 FTCDNL1E5RQL4 147 aa11.66□□□□□ -0.54
PKN1-211ENST00000588200 RPL36A-HNRNPH2H7BZ11 118 aa11.66□□□□□ -0.54
PKN1-211ENST00000588200 M0R1B8 84 aa11.66□□□□□ -0.54
PKN1-211ENST00000588200 F12P00748 615 aaPredicted RBP11.66□□□□□ -0.54
PKN1-211ENST00000588200 IFNA2P01563 188 aa11.66□□□□□ -0.54
PKN1-211ENST00000588200 HOXB9P17482 250 aaPredicted RBP11.66□□□□□ -0.54
PKN1-211ENST00000588200 CCNA2P20248 432 aa11.66□□□□□ -0.54
PKN1-211ENST00000588200 THBS2P35442 1172 aa11.66□□□□□ -0.54
PKN1-211ENST00000588200 NME5P56597 212 aa11.66□□□□□ -0.54
PKN1-211ENST00000588200 DSTNP60981 165 aa11.66□□□□□ -0.54
PKN1-211ENST00000588200 SLC25A3Q00325 362 aa11.66□□□□□ -0.54
PKN1-211ENST00000588200 SPOCK1Q08629 439 aa11.66□□□□□ -0.54
PKN1-211ENST00000588200 FADDQ13158 208 aa11.66□□□□□ -0.54
PKN1-211ENST00000588200 C5orf46Q6UWT4 87 aa11.66□□□□□ -0.54
PKN1-211ENST00000588200 C6orf89Q6UWU4 347 aa11.66□□□□□ -0.54
PKN1-211ENST00000588200 AAED1Q7RTV5 226 aa11.66□□□□□ -0.54
PKN1-211ENST00000588200 VRK2Q86Y07 508 aa11.66□□□□□ -0.54
PKN1-211ENST00000588200 ANKRD42Q8N9B4 389 aa11.66□□□□□ -0.54
PKN1-211ENST00000588200 MFSD8Q8NHS3 518 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms