RNA–Protein interactions for RNA: ENST00000587604.1

DNMT1-213, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-213ENST00000587604 HAX1O00165 279 aa12.24□□□□□ -0.45
DNMT1-213ENST00000587604 ITM2AO43736 263 aa12.24□□□□□ -0.45
DNMT1-213ENST00000587604 TYROBPO43914 113 aa12.24□□□□□ -0.45
DNMT1-213ENST00000587604 KRT33AO76009 404 aa12.24□□□□□ -0.45
DNMT1-213ENST00000587604 PDE5AO76074 875 aa12.24□□□□□ -0.45
DNMT1-213ENST00000587604 AKR7A3O95154 331 aa12.24□□□□□ -0.45
DNMT1-213ENST00000587604 TGFAP01135 160 aa12.24□□□□□ -0.45
DNMT1-213ENST00000587604 CRYAAP02489 173 aa12.24□□□□□ -0.45
DNMT1-213ENST00000587604 C1QCP02747 245 aa12.24□□□□□ -0.45
DNMT1-213ENST00000587604 CHRM4P08173 479 aa12.24□□□□□ -0.45
DNMT1-213ENST00000587604 MYZAPP0CAP1 466 aa12.24□□□□□ -0.45
DNMT1-213ENST00000587604 CREB1P16220 341 aa12.24□□□□□ -0.45
DNMT1-213ENST00000587604 IL7RP16871 459 aa12.24□□□□□ -0.45
DNMT1-213ENST00000587604 RPS4Y1P22090 263 aaKnown RBP12.24□□□□□ -0.45
DNMT1-213ENST00000587604 S100A3P33764 101 aa12.24□□□□□ -0.45
DNMT1-213ENST00000587604 ANXA11P50995 505 aaKnown RBP12.24□□□□□ -0.45
DNMT1-213ENST00000587604 CLNS1AP54105 237 aaKnown RBP12.24□□□□□ -0.45
DNMT1-213ENST00000587604 SRSF2Q01130 221 aaKnown RBP12.24□□□□□ -0.45
DNMT1-213ENST00000587604 EPS8Q12929 822 aa12.24□□□□□ -0.45
DNMT1-213ENST00000587604 OR7A5Q15622 319 aa12.24□□□□□ -0.45
DNMT1-213ENST00000587604 EFNB3Q15768 340 aa12.24□□□□□ -0.45
DNMT1-213ENST00000587604 CARTPTQ16568 116 aa12.24□□□□□ -0.45
DNMT1-213ENST00000587604 TBRG1Q3YBR2 411 aa12.24□□□□□ -0.45
DNMT1-213ENST00000587604 IQCCQ4KMZ1 466 aa12.24□□□□□ -0.45
DNMT1-213ENST00000587604 TMEM225Q6GV28 225 aa12.24□□□□□ -0.45
DNMT1-213ENST00000587604 SLC46A3Q7Z3Q1 461 aa12.24□□□□□ -0.45
DNMT1-213ENST00000587604 GPAT4Q86UL3 456 aa12.24□□□□□ -0.45
DNMT1-213ENST00000587604 ZNF781Q8N8C0 355 aa12.24□□□□□ -0.45
DNMT1-213ENST00000587604 OR1K1Q8NGR3 316 aa12.24□□□□□ -0.45
DNMT1-213ENST00000587604 WDR60Q8WVS4 1066 aa12.24□□□□□ -0.45
DNMT1-213ENST00000587604 C3orf49Q96BT1 292 aa12.24□□□□□ -0.45
DNMT1-213ENST00000587604 CCDC115Q96NT0 180 aa12.24□□□□□ -0.45
DNMT1-213ENST00000587604 ZNF317Q96PQ6 595 aaPredicted RBP12.24□□□□□ -0.45
DNMT1-213ENST00000587604 ROPN1BQ9BZX4 212 aaPredicted RBP12.24□□□□□ -0.45
DNMT1-213ENST00000587604 ROPN1Q9HAT0 212 aaPredicted RBP12.24□□□□□ -0.45
DNMT1-213ENST00000587604 CCDC154A6NI56 674 aa12.23□□□□□ -0.45
DNMT1-213ENST00000587604 OR6C65A6NJZ3 312 aa12.23□□□□□ -0.45
DNMT1-213ENST00000587604 ZNF587BE7ETH6 402 aa12.23□□□□□ -0.45
DNMT1-213ENST00000587604 E9PBE3 544 aa12.23□□□□□ -0.45
DNMT1-213ENST00000587604 VAMP5O95183 116 aa12.23□□□□□ -0.45
DNMT1-213ENST00000587604 DBIP07108 87 aaKnown RBP12.23□□□□□ -0.45
DNMT1-213ENST00000587604 OR4A8P0C604 315 aa12.23□□□□□ -0.45
DNMT1-213ENST00000587604 ZNF23P17027 643 aa12.23□□□□□ -0.45
DNMT1-213ENST00000587604 CXCR1P25024 350 aa12.23□□□□□ -0.45
DNMT1-213ENST00000587604 UBE2NP61088 152 aaKnown RBP12.23□□□□□ -0.45
DNMT1-213ENST00000587604 ABCE1P61221 599 aaKnown RBP12.23□□□□□ -0.45
DNMT1-213ENST00000587604 IFFO1Q0D2I5 559 aa12.23□□□□□ -0.45
DNMT1-213ENST00000587604 ADIPOQQ15848 244 aa12.23□□□□□ -0.45
DNMT1-213ENST00000587604 C3orf36Q3SXR2 165 aa12.23□□□□□ -0.45
DNMT1-213ENST00000587604 FAM174BQ3ZCQ3 159 aa12.23□□□□□ -0.45
DNMT1-213ENST00000587604 MRPL2Q5T653 305 aaKnown RBP12.23□□□□□ -0.45
DNMT1-213ENST00000587604 LIPNQ5VXI9 398 aa12.23□□□□□ -0.45
DNMT1-213ENST00000587604 ANKRD16Q6P6B7 361 aa12.23□□□□□ -0.45
DNMT1-213ENST00000587604 SPATA19Q7Z5L4 167 aa12.23□□□□□ -0.45
DNMT1-213ENST00000587604 LSRQ86X29 649 aaPredicted RBP12.23□□□□□ -0.45
DNMT1-213ENST00000587604 ZNF440Q8IYI8 595 aa12.23□□□□□ -0.45
DNMT1-213ENST00000587604 LRRC34Q8IZ02 419 aa12.23□□□□□ -0.45
DNMT1-213ENST00000587604 TRIML2Q8N7C3 387 aa12.23□□□□□ -0.45
DNMT1-213ENST00000587604 ANKS4BQ8N8V4 417 aa12.23□□□□□ -0.45
DNMT1-213ENST00000587604 BPESC1Q9GZL8 116 aa12.23□□□□□ -0.45
DNMT1-213ENST00000587604 PLK3Q9H4B4 646 aa12.23□□□□□ -0.45
DNMT1-213ENST00000587604 CRNNQ9UBG3 495 aaPredicted RBP12.23□□□□□ -0.45
DNMT1-213ENST00000587604 FBXO9Q9UK97 447 aaPredicted RBP12.23□□□□□ -0.45
DNMT1-213ENST00000587604 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.23□□□□□ -0.45
DNMT1-213ENST00000587604 RAP2CQ9Y3L5 183 aa12.23□□□□□ -0.45
DNMT1-213ENST00000587604 ARPC4-TTLL3A0A0A6YYG9 625 aa12.22□□□□□ -0.45
DNMT1-213ENST00000587604 SNUPNO95149 360 aaKnown RBP12.22□□□□□ -0.45
DNMT1-213ENST00000587604 LGI1O95970 557 aa12.22□□□□□ -0.45
DNMT1-213ENST00000587604 SERPINE1P05121 402 aa12.22□□□□□ -0.45
DNMT1-213ENST00000587604 NR2F1P10589 423 aa12.22□□□□□ -0.45
DNMT1-213ENST00000587604 HOXB1P14653 301 aaPredicted RBP12.22□□□□□ -0.45
DNMT1-213ENST00000587604 LBPP18428 481 aa12.22□□□□□ -0.45
DNMT1-213ENST00000587604 RPL14P50914 215 aaKnown RBP12.22□□□□□ -0.45
DNMT1-213ENST00000587604 P2RY4P51582 365 aa12.22□□□□□ -0.45
DNMT1-213ENST00000587604 NAAAQ02083 359 aa12.22□□□□□ -0.45
DNMT1-213ENST00000587604 CREB3L2Q70SY1 520 aa12.22□□□□□ -0.45
DNMT1-213ENST00000587604 PEX5LQ8IYB4 626 aa12.22□□□□□ -0.45
DNMT1-213ENST00000587604 FAM169BQ8N8A8 192 aa12.22□□□□□ -0.45
DNMT1-213ENST00000587604 OR4F15Q8NGB8 312 aa12.22□□□□□ -0.45
DNMT1-213ENST00000587604 MAGEE2Q8TD90 523 aaPredicted RBP12.22□□□□□ -0.45
DNMT1-213ENST00000587604 BCL2L2Q92843 193 aaPredicted RBP12.22□□□□□ -0.45
DNMT1-213ENST00000587604 PKNOX2Q96KN3 472 aa12.22□□□□□ -0.45
DNMT1-213ENST00000587604 PANX1Q96RD7 426 aa12.22□□□□□ -0.45
DNMT1-213ENST00000587604 TAPBPLQ9BX59 468 aa12.22□□□□□ -0.45
DNMT1-213ENST00000587604 C20orf27Q9GZN8 174 aa12.22□□□□□ -0.45
DNMT1-213ENST00000587604 RAB1BQ9H0U4 201 aa12.22□□□□□ -0.45
DNMT1-213ENST00000587604 MOV10Q9HCE1 1003 aaKnown RBP12.22□□□□□ -0.45
DNMT1-213ENST00000587604 RLIMQ9NVW2 624 aa12.22□□□□□ -0.45
DNMT1-213ENST00000587604 ADPRHL2Q9NX46 363 aa12.22□□□□□ -0.45
DNMT1-213ENST00000587604 WDR91A4D1P6 747 aa12.21□□□□□ -0.45
DNMT1-213ENST00000587604 CDHR4A6H8M9 788 aa12.21□□□□□ -0.45
DNMT1-213ENST00000587604 A8MVM7 634 aa12.21□□□□□ -0.45
DNMT1-213ENST00000587604 VSTM5A8MXK1 200 aa12.21□□□□□ -0.45
DNMT1-213ENST00000587604 STAMBPO95630 424 aa12.21□□□□□ -0.45
DNMT1-213ENST00000587604 IGLV1-44P01699 117 aa12.21□□□□□ -0.45
DNMT1-213ENST00000587604 PGRP06401 933 aa12.21□□□□□ -0.45
DNMT1-213ENST00000587604 CECR9P0C854 216 aa12.21□□□□□ -0.45
DNMT1-213ENST00000587604 GIFP27352 417 aa12.21□□□□□ -0.45
DNMT1-213ENST00000587604 ACAA2P42765 397 aaKnown RBP12.21□□□□□ -0.45
DNMT1-213ENST00000587604 SELENOPP49908 381 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms