RNA–Protein interactions for RNA: ENST00000581570.5

SS18-219, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-219ENST00000581570 ZNF208O43345 1280 aa10.99□□□□□ -0.65
SS18-219ENST00000581570 PNPP00491 289 aa10.99□□□□□ -0.65
SS18-219ENST00000581570 CELA3BP08861 270 aa10.99□□□□□ -0.65
SS18-219ENST00000581570 GAAP10253 952 aa10.99□□□□□ -0.65
SS18-219ENST00000581570 COL8A2P25067 703 aa10.99□□□□□ -0.65
SS18-219ENST00000581570 SOAT1P35610 550 aa10.99□□□□□ -0.65
SS18-219ENST00000581570 FOXL1Q12952 345 aa10.99□□□□□ -0.65
SS18-219ENST00000581570 SLC9B1Q4ZJI4 515 aa10.99□□□□□ -0.65
SS18-219ENST00000581570 ELFN2Q5R3F8 820 aa10.99□□□□□ -0.65
SS18-219ENST00000581570 TREML4Q6UXN2 200 aa10.99□□□□□ -0.65
SS18-219ENST00000581570 C1orf229Q6ZS94 237 aaPredicted RBP10.99□□□□□ -0.65
SS18-219ENST00000581570 RNF165Q6ZSG1 346 aa10.99□□□□□ -0.65
SS18-219ENST00000581570 C16orf62Q7Z3J2 963 aa10.99□□□□□ -0.65
SS18-219ENST00000581570 C6orf120Q7Z4R8 191 aa10.99□□□□□ -0.65
SS18-219ENST00000581570 LSRQ86X29 649 aaPredicted RBP10.99□□□□□ -0.65
SS18-219ENST00000581570 ARFGAP2Q8N6H7 521 aa10.99□□□□□ -0.65
SS18-219ENST00000581570 TMEM99Q8N816 258 aa10.99□□□□□ -0.65
SS18-219ENST00000581570 MRPL24Q96A35 216 aaKnown RBP10.99□□□□□ -0.65
SS18-219ENST00000581570 ZNF317Q96PQ6 595 aaPredicted RBP10.99□□□□□ -0.65
SS18-219ENST00000581570 RACGAP1Q9H0H5 632 aa10.99□□□□□ -0.65
SS18-219ENST00000581570 SERHL2Q9H4I8 314 aa10.99□□□□□ -0.65
SS18-219ENST00000581570 PIF1Q9H611 641 aa10.99□□□□□ -0.65
SS18-219ENST00000581570 EXD2Q9NVH0 621 aa10.99□□□□□ -0.65
SS18-219ENST00000581570 OSGIN1Q9UJX0 560 aa10.99□□□□□ -0.65
SS18-219ENST00000581570 ZC3H12DA2A288 527 aaKnown RBP10.98□□□□□ -0.65
SS18-219ENST00000581570 AKR7A3O95154 331 aa10.98□□□□□ -0.65
SS18-219ENST00000581570 BCL10O95999 233 aa10.98□□□□□ -0.65
SS18-219ENST00000581570 CHEK2O96017 543 aa10.98□□□□□ -0.65
SS18-219ENST00000581570 AVPP01185 164 aa10.98□□□□□ -0.65
SS18-219ENST00000581570 IGKV3-15P01624 115 aa10.98□□□□□ -0.65
SS18-219ENST00000581570 CBR1P16152 277 aa10.98□□□□□ -0.65
SS18-219ENST00000581570 MAPK1P28482 360 aa10.98□□□□□ -0.65
SS18-219ENST00000581570 SELENOPP49908 381 aa10.98□□□□□ -0.65
SS18-219ENST00000581570 POLR2HP52434 150 aaKnown RBP10.98□□□□□ -0.65
SS18-219ENST00000581570 POU3F1Q03052 451 aaPredicted RBP10.98□□□□□ -0.65
SS18-219ENST00000581570 CEACAM7Q14002 265 aa10.98□□□□□ -0.65
SS18-219ENST00000581570 MIDNQ504T8 468 aa10.98□□□□□ -0.65
SS18-219ENST00000581570 ATP6AP1LQ52LC2 224 aa10.98□□□□□ -0.65
SS18-219ENST00000581570 ZNF572Q7Z3I7 529 aaPredicted RBP10.98□□□□□ -0.65
SS18-219ENST00000581570 GPAT4Q86UL3 456 aa10.98□□□□□ -0.65
SS18-219ENST00000581570 MYPOPQ86VE0 399 aaPredicted RBP10.98□□□□□ -0.65
SS18-219ENST00000581570 ZDHHC22Q8N966 263 aa10.98□□□□□ -0.65
SS18-219ENST00000581570 OIT3Q8WWZ8 545 aa10.98□□□□□ -0.65
SS18-219ENST00000581570 IFT81Q8WYA0 676 aa10.98□□□□□ -0.65
SS18-219ENST00000581570 COQ8BQ96D53 544 aa10.98□□□□□ -0.65
SS18-219ENST00000581570 ALKBH3Q96Q83 286 aaPredicted RBP10.98□□□□□ -0.65
SS18-219ENST00000581570 FMO2Q99518 471 aa10.98□□□□□ -0.65
SS18-219ENST00000581570 PRPF18Q99633 342 aaKnown RBP10.98□□□□□ -0.65
SS18-219ENST00000581570 SLC6A7Q99884 636 aa10.98□□□□□ -0.65
SS18-219ENST00000581570 ESM1Q9NQ30 184 aa10.98□□□□□ -0.65
SS18-219ENST00000581570 EXOSC3Q9NQT5 275 aaKnown RBP10.98□□□□□ -0.65
SS18-219ENST00000581570 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.98□□□□□ -0.65
SS18-219ENST00000581570 REV1Q9UBZ9 1251 aa10.98□□□□□ -0.65
SS18-219ENST00000581570 CMAHPQ9Y471 501 aa10.98□□□□□ -0.65
SS18-219ENST00000581570 WDR45Q9Y484 360 aa10.98□□□□□ -0.65
SS18-219ENST00000581570 IGHV2OR16-5A0A0B4J2B6 119 aa10.97□□□□□ -0.65
SS18-219ENST00000581570 WNT9BO14905 357 aa10.97□□□□□ -0.65
SS18-219ENST00000581570 SYNGR3O43761 229 aa10.97□□□□□ -0.65
SS18-219ENST00000581570 GLRA3O75311 464 aa10.97□□□□□ -0.65
SS18-219ENST00000581570 UPK3AO75631 287 aa10.97□□□□□ -0.65
SS18-219ENST00000581570 HPXP02790 462 aa10.97□□□□□ -0.65
SS18-219ENST00000581570 PROCP04070 461 aa10.97□□□□□ -0.65
SS18-219ENST00000581570 GPIP06744 558 aa10.97□□□□□ -0.65
SS18-219ENST00000581570 HKR1P10072 659 aa10.97□□□□□ -0.65
SS18-219ENST00000581570 TCN1P20061 433 aaPredicted RBP10.97□□□□□ -0.65
SS18-219ENST00000581570 ACHEP22303 614 aa10.97□□□□□ -0.65
SS18-219ENST00000581570 TACR3P29371 465 aa10.97□□□□□ -0.65
SS18-219ENST00000581570 CASQ1P31415 396 aa10.97□□□□□ -0.65
SS18-219ENST00000581570 TMEM33P57088 247 aa10.97□□□□□ -0.65
SS18-219ENST00000581570 LMO4P61968 165 aa10.97□□□□□ -0.65
SS18-219ENST00000581570 HBA1P69905 142 aa10.97□□□□□ -0.65
SS18-219ENST00000581570 KCNJ10P78508 379 aa10.97□□□□□ -0.65
SS18-219ENST00000581570 MYBPC1Q00872 1141 aa10.97□□□□□ -0.65
SS18-219ENST00000581570 SNTB2Q13425 540 aaKnown RBP10.97□□□□□ -0.65
SS18-219ENST00000581570 DAG1Q14118 895 aa10.97□□□□□ -0.65
SS18-219ENST00000581570 OR7A5Q15622 319 aa10.97□□□□□ -0.65
SS18-219ENST00000581570 FAM153CQ494X1 144 aa10.97□□□□□ -0.65
SS18-219ENST00000581570 ZNF311Q5JNZ3 666 aa10.97□□□□□ -0.65
SS18-219ENST00000581570 AP1ARQ63HQ0 302 aa10.97□□□□□ -0.65
SS18-219ENST00000581570 TMEM225Q6GV28 225 aa10.97□□□□□ -0.65
SS18-219ENST00000581570 TYW3Q6IPR3 259 aaKnown RBP10.97□□□□□ -0.65
SS18-219ENST00000581570 LINGO2Q7L985 606 aa10.97□□□□□ -0.65
SS18-219ENST00000581570 HMGN2P46Q86SG4 172 aa10.97□□□□□ -0.65
SS18-219ENST00000581570 DDIASQ8IXT1 998 aa10.97□□□□□ -0.65
SS18-219ENST00000581570 CLEC4FQ8N1N0 589 aa10.97□□□□□ -0.65
SS18-219ENST00000581570 LRRC17Q8N6Y2 441 aa10.97□□□□□ -0.65
SS18-219ENST00000581570 IL17RDQ8NFM7 739 aa10.97□□□□□ -0.65
SS18-219ENST00000581570 RDH5Q92781 318 aa10.97□□□□□ -0.65
SS18-219ENST00000581570 ZG16BQ96DA0 208 aa10.97□□□□□ -0.65
SS18-219ENST00000581570 SLC35G5Q96KT7 338 aa10.97□□□□□ -0.65
SS18-219ENST00000581570 NELFAQ9H3P2 528 aa10.97□□□□□ -0.65
SS18-219ENST00000581570 MS4A5Q9H3V2 200 aa10.97□□□□□ -0.65
SS18-219ENST00000581570 SLC52A3Q9NQ40 469 aa10.97□□□□□ -0.65
SS18-219ENST00000581570 OXSMQ9NWU1 459 aa10.97□□□□□ -0.65
SS18-219ENST00000581570 DNAJC15Q9Y5T4 150 aa10.97□□□□□ -0.65
SS18-219ENST00000581570 TRRAPQ9Y4A5 3859 aa10.96□□□□□ -0.65
SS18-219ENST00000581570 LIPT2A6NK58 231 aa10.96□□□□□ -0.65
SS18-219ENST00000581570 AQP7P3A6NL99 342 aa10.96□□□□□ -0.65
SS18-219ENST00000581570 CLDN24A6NM45 220 aa10.96□□□□□ -0.65
SS18-219ENST00000581570 M0R233 179 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms