RNA–Protein interactions for RNA: ENST00000580237.5

NDEL1-208, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 4

Gene NDEL1, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-208ENST00000580237 M0R3H8 397 aa9.65□□□□□ -0.86
NDEL1-208ENST00000580237 FXYD1O00168 92 aa9.65□□□□□ -0.86
NDEL1-208ENST00000580237 RAD51DO75771 328 aa9.65□□□□□ -0.86
NDEL1-208ENST00000580237 KRT33AO76009 404 aa9.65□□□□□ -0.86
NDEL1-208ENST00000580237 MFN2O95140 757 aa9.65□□□□□ -0.86
NDEL1-208ENST00000580237 CNOT4O95628 575 aaKnown RBP9.65□□□□□ -0.86
NDEL1-208ENST00000580237 NPPAP01160 153 aa9.65□□□□□ -0.86
NDEL1-208ENST00000580237 HTR2AP28223 471 aa9.65□□□□□ -0.86
NDEL1-208ENST00000580237 HOXC12P31275 282 aa9.65□□□□□ -0.86
NDEL1-208ENST00000580237 IST1P53990 364 aa9.65□□□□□ -0.86
NDEL1-208ENST00000580237 PCBP3P57721 371 aaKnown RBP9.65□□□□□ -0.86
NDEL1-208ENST00000580237 DMTNQ08495 405 aa9.65□□□□□ -0.86
NDEL1-208ENST00000580237 VMACQ2NL98 169 aa9.65□□□□□ -0.86
NDEL1-208ENST00000580237 FBXW9Q5XUX1 488 aa9.65□□□□□ -0.86
NDEL1-208ENST00000580237 NANOGP8Q6NSW7 305 aa9.65□□□□□ -0.86
NDEL1-208ENST00000580237 ERICH5Q6P6B1 374 aa9.65□□□□□ -0.86
NDEL1-208ENST00000580237 ULK3Q6PHR2 472 aa9.65□□□□□ -0.86
NDEL1-208ENST00000580237 SPATA21Q7Z572 469 aa9.65□□□□□ -0.86
NDEL1-208ENST00000580237 ARPINQ7Z6K5 226 aa9.65□□□□□ -0.86
NDEL1-208ENST00000580237 COMTD1Q86VU5 262 aa9.65□□□□□ -0.86
NDEL1-208ENST00000580237 LURAP1LQ8IV03 231 aa9.65□□□□□ -0.86
NDEL1-208ENST00000580237 TMEM99Q8N816 258 aa9.65□□□□□ -0.86
NDEL1-208ENST00000580237 OR9K2Q8NGE7 335 aa9.65□□□□□ -0.86
NDEL1-208ENST00000580237 RASSF5Q8WWW0 418 aa9.65□□□□□ -0.86
NDEL1-208ENST00000580237 PROX1Q92786 737 aa9.65□□□□□ -0.86
NDEL1-208ENST00000580237 MUCL1Q96DR8 90 aa9.65□□□□□ -0.86
NDEL1-208ENST00000580237 SLC47A1Q96FL8 570 aa9.65□□□□□ -0.86
NDEL1-208ENST00000580237 ZNF317Q96PQ6 595 aaPredicted RBP9.65□□□□□ -0.86
NDEL1-208ENST00000580237 EPYCQ99645 322 aa9.65□□□□□ -0.86
NDEL1-208ENST00000580237 USB1Q9BQ65 265 aaKnown RBP9.65□□□□□ -0.86
NDEL1-208ENST00000580237 NANOGQ9H9S0 305 aa9.65□□□□□ -0.86
NDEL1-208ENST00000580237 C12orf10Q9HB07 376 aa9.65□□□□□ -0.86
NDEL1-208ENST00000580237 PARPBPQ9NWS1 579 aa9.65□□□□□ -0.86
NDEL1-208ENST00000580237 ASB6Q9NWX5 421 aa9.65□□□□□ -0.86
NDEL1-208ENST00000580237 FLVCR1Q9Y5Y0 555 aa9.65□□□□□ -0.86
NDEL1-208ENST00000580237 MED13LQ71F56 2210 aa9.65□□□□□ -0.86
NDEL1-208ENST00000580237 ARID1AO14497 2285 aa9.65□□□□□ -0.87
NDEL1-208ENST00000580237 PDZD2O15018 2839 aa9.64□□□□□ -0.87
NDEL1-208ENST00000580237 RAI1Q7Z5J4 1906 aaPredicted RBP9.64□□□□□ -0.87
NDEL1-208ENST00000580237 PRRC2AP48634 2157 aaKnown RBP9.64□□□□□ -0.87
NDEL1-208ENST00000580237 HRNRQ86YZ3 2850 aaPredicted RBP9.64□□□□□ -0.87
NDEL1-208ENST00000580237 CPSF4LA6NMK7 179 aaKnown RBP9.64□□□□□ -0.87
NDEL1-208ENST00000580237 AIM2O14862 343 aa9.64□□□□□ -0.87
NDEL1-208ENST00000580237 SIAH2O43255 324 aa9.64□□□□□ -0.87
NDEL1-208ENST00000580237 OR2T1O43869 369 aa9.64□□□□□ -0.87
NDEL1-208ENST00000580237 IFNA14P01570 189 aa9.64□□□□□ -0.87
NDEL1-208ENST00000580237 THBDP07204 575 aa9.64□□□□□ -0.87
NDEL1-208ENST00000580237 NQO1P15559 274 aaKnown RBP9.64□□□□□ -0.87
NDEL1-208ENST00000580237 GGT1P19440 569 aa9.64□□□□□ -0.87
NDEL1-208ENST00000580237 COX5AP20674 150 aa9.64□□□□□ -0.87
NDEL1-208ENST00000580237 PTNP21246 168 aa9.64□□□□□ -0.87
NDEL1-208ENST00000580237 EDNRAP25101 427 aa9.64□□□□□ -0.87
NDEL1-208ENST00000580237 H3F3AP84243 136 aa9.64□□□□□ -0.87
NDEL1-208ENST00000580237 FAPQ12884 760 aa9.64□□□□□ -0.87
NDEL1-208ENST00000580237 OR1Q1Q15612 314 aa9.64□□□□□ -0.87
NDEL1-208ENST00000580237 LRRC23Q53EV4 343 aaPredicted RBP9.64□□□□□ -0.87
NDEL1-208ENST00000580237 FAM69AQ5T7M9 428 aa9.64□□□□□ -0.87
NDEL1-208ENST00000580237 FAM91A1Q658Y4 838 aa9.64□□□□□ -0.87
NDEL1-208ENST00000580237 C6orf89Q6UWU4 347 aa9.64□□□□□ -0.87
NDEL1-208ENST00000580237 AAED1Q7RTV5 226 aa9.64□□□□□ -0.87
NDEL1-208ENST00000580237 CPLX4Q7Z7G2 160 aa9.64□□□□□ -0.87
NDEL1-208ENST00000580237 C10orf53Q8N6V4 93 aa9.64□□□□□ -0.87
NDEL1-208ENST00000580237 LSMEM1Q8N8F7 131 aa9.64□□□□□ -0.87
NDEL1-208ENST00000580237 MFSD8Q8NHS3 518 aa9.64□□□□□ -0.87
NDEL1-208ENST00000580237 RP9Q8TA86 221 aaKnown RBP9.64□□□□□ -0.87
NDEL1-208ENST00000580237 TAMM41Q96BW9 452 aa9.64□□□□□ -0.87
NDEL1-208ENST00000580237 PLPPR2Q96GM1 343 aa9.64□□□□□ -0.87
NDEL1-208ENST00000580237 HS3ST6Q96QI5 342 aa9.64□□□□□ -0.87
NDEL1-208ENST00000580237 MCHR1Q99705 422 aa9.64□□□□□ -0.87
NDEL1-208ENST00000580237 ELAC2Q9BQ52 826 aaKnown RBP9.64□□□□□ -0.87
NDEL1-208ENST00000580237 SF3B5Q9BWJ5 86 aaKnown RBP9.64□□□□□ -0.87
NDEL1-208ENST00000580237 ESRP2Q9H6T0 727 aaKnown RBP9.64□□□□□ -0.87
NDEL1-208ENST00000580237 MALT1Q9UDY8 824 aa9.64□□□□□ -0.87
NDEL1-208ENST00000580237 CADP27708 2225 aa9.64□□□□□ -0.87
NDEL1-208ENST00000580237 TACC2O95359 2948 aa9.63□□□□□ -0.87
NDEL1-208ENST00000580237 TRAV36DV7A0A075B6V5 113 aa9.63□□□□□ -0.87
NDEL1-208ENST00000580237 A0A0B4J2E0 115 aa9.63□□□□□ -0.87
NDEL1-208ENST00000580237 A0A1B0GX12 115 aa9.63□□□□□ -0.87
NDEL1-208ENST00000580237 FAM220BPB1ANY3 271 aa9.63□□□□□ -0.87
NDEL1-208ENST00000580237 CLOCKO15516 846 aa9.63□□□□□ -0.87
NDEL1-208ENST00000580237 AKAP8O43823 692 aaKnown RBP9.63□□□□□ -0.87
NDEL1-208ENST00000580237 VAMP5O95183 116 aa9.63□□□□□ -0.87
NDEL1-208ENST00000580237 C8BP07358 591 aa9.63□□□□□ -0.87
NDEL1-208ENST00000580237 COX4I1P13073 169 aa9.63□□□□□ -0.87
NDEL1-208ENST00000580237 CD247P20963 164 aa9.63□□□□□ -0.87
NDEL1-208ENST00000580237 CBLP22681 906 aa9.63□□□□□ -0.87
NDEL1-208ENST00000580237 IGHV1-2P23083 117 aa9.63□□□□□ -0.87
NDEL1-208ENST00000580237 NUDT2P50583 147 aa9.63□□□□□ -0.87
NDEL1-208ENST00000580237 SEC24CP53992 1094 aa9.63□□□□□ -0.87
NDEL1-208ENST00000580237 GNGT1P63211 74 aa9.63□□□□□ -0.87
NDEL1-208ENST00000580237 C1DQ13901 141 aaKnown RBP9.63□□□□□ -0.87
NDEL1-208ENST00000580237 SLC17A1Q14916 467 aa9.63□□□□□ -0.87
NDEL1-208ENST00000580237 PPA1Q15181 289 aa9.63□□□□□ -0.87
NDEL1-208ENST00000580237 TAB1Q15750 504 aa9.63□□□□□ -0.87
NDEL1-208ENST00000580237 SWT1Q5T5J6 900 aaKnown RBP9.63□□□□□ -0.87
NDEL1-208ENST00000580237 C9orf135Q5VTT2 229 aa9.63□□□□□ -0.87
NDEL1-208ENST00000580237 KLHL24Q6TFL4 600 aa9.63□□□□□ -0.87
NDEL1-208ENST00000580237 ZNF704Q6ZNC4 412 aaPredicted RBP9.63□□□□□ -0.87
NDEL1-208ENST00000580237 ABHD12BQ7Z5M8 362 aaPredicted RBP9.63□□□□□ -0.87
NDEL1-208ENST00000580237 P3H2Q8IVL5 708 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms