RNA–Protein interactions for RNA: ENST00000580222.5

LIMD2-209, Transcript of LIM domain containing 2, humanhuman

TSL 3

Gene LIMD2, Length 846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-209ENST00000580222 BHLHE22Q8NFJ8 381 aaPredicted RBP17.2■□□□□ 0.34
LIMD2-209ENST00000580222 RASSF5Q8WWW0 418 aa17.2■□□□□ 0.34
LIMD2-209ENST00000580222 TAMM41Q96BW9 452 aa17.2■□□□□ 0.34
LIMD2-209ENST00000580222 CLPTM1LQ96KA5 538 aa17.2■□□□□ 0.34
LIMD2-209ENST00000580222 PINK1Q9BXM7 581 aa17.2■□□□□ 0.34
LIMD2-209ENST00000580222 BEX2Q9BXY8 128 aa17.2■□□□□ 0.34
LIMD2-209ENST00000580222 PTGES2Q9H7Z7 377 aa17.2■□□□□ 0.34
LIMD2-209ENST00000580222 DKKL1Q9UK85 242 aa17.2■□□□□ 0.34
LIMD2-209ENST00000580222 SLC13A4Q9UKG4 626 aa17.2■□□□□ 0.34
LIMD2-209ENST00000580222 PROCRQ9UNN8 238 aa17.2■□□□□ 0.34
LIMD2-209ENST00000580222 SNX13Q9Y5W8 968 aa17.2■□□□□ 0.34
LIMD2-209ENST00000580222 IGLV3-32A0A0A0MS00 114 aa17.19■□□□□ 0.34
LIMD2-209ENST00000580222 AQP8O94778 261 aa17.19■□□□□ 0.34
LIMD2-209ENST00000580222 ME2P23368 584 aa17.19■□□□□ 0.34
LIMD2-209ENST00000580222 MSX2P35548 267 aaPredicted RBP17.19■□□□□ 0.34
LIMD2-209ENST00000580222 SKP2Q13309 424 aa17.19■□□□□ 0.34
LIMD2-209ENST00000580222 ZSWIM7Q19AV6 140 aa17.19■□□□□ 0.34
LIMD2-209ENST00000580222 ALKBH2Q6NS38 261 aa17.19■□□□□ 0.34
LIMD2-209ENST00000580222 ADAM5Q6NVV9 412 aa17.19■□□□□ 0.34
LIMD2-209ENST00000580222 CBLN3Q6UW01 205 aa17.19■□□□□ 0.34
LIMD2-209ENST00000580222 ATG4DQ86TL0 474 aaPredicted RBP17.19■□□□□ 0.34
LIMD2-209ENST00000580222 FAM71CQ8NEG0 241 aa17.19■□□□□ 0.34
LIMD2-209ENST00000580222 TOR1AIP2Q8NFQ8 470 aa17.19■□□□□ 0.34
LIMD2-209ENST00000580222 CNOT9Q92600 299 aaKnown RBP17.19■□□□□ 0.34
LIMD2-209ENST00000580222 GTPBP3Q969Y2 492 aaKnown RBP17.19■□□□□ 0.34
LIMD2-209ENST00000580222 CCDC124Q96CT7 223 aaKnown RBP17.19■□□□□ 0.34
LIMD2-209ENST00000580222 KCNK17Q96T54 332 aa17.19■□□□□ 0.34
LIMD2-209ENST00000580222 LAT2Q9GZY6 243 aa17.19■□□□□ 0.34
LIMD2-209ENST00000580222 LRMDAQ9H2I8 198 aa17.19■□□□□ 0.34
LIMD2-209ENST00000580222 CDHR4A6H8M9 788 aa17.18■□□□□ 0.34
LIMD2-209ENST00000580222 ARPC2O15144 300 aa17.18■□□□□ 0.34
LIMD2-209ENST00000580222 KCNAB3O43448 404 aa17.18■□□□□ 0.34
LIMD2-209ENST00000580222 BCAS1O75363 584 aaPredicted RBP17.18■□□□□ 0.34
LIMD2-209ENST00000580222 DPP4P27487 766 aa17.18■□□□□ 0.34
LIMD2-209ENST00000580222 SUMO3P55854 103 aaPredicted RBP17.18■□□□□ 0.34
LIMD2-209ENST00000580222 CLDN20P56880 219 aa17.18■□□□□ 0.34
LIMD2-209ENST00000580222 PLAURQ03405 335 aa17.18■□□□□ 0.34
LIMD2-209ENST00000580222 FAPQ12884 760 aa17.18■□□□□ 0.34
LIMD2-209ENST00000580222 TMEM249Q2WGJ8 235 aa17.18■□□□□ 0.34
LIMD2-209ENST00000580222 CHMP1BQ7LBR1 199 aa17.18■□□□□ 0.34
LIMD2-209ENST00000580222 ZNF440Q8IYI8 595 aa17.18■□□□□ 0.34
LIMD2-209ENST00000580222 OR5M1Q8NGP8 315 aa17.18■□□□□ 0.34
LIMD2-209ENST00000580222 SMAP2Q8WU79 429 aaPredicted RBP17.18■□□□□ 0.34
LIMD2-209ENST00000580222 ROBO4Q8WZ75 1007 aa17.18■□□□□ 0.34
LIMD2-209ENST00000580222 CADM1Q9BY67 442 aaKnown RBP17.18■□□□□ 0.34
LIMD2-209ENST00000580222 AMBRA1Q9C0C7 1298 aa17.18■□□□□ 0.34
LIMD2-209ENST00000580222 PCDHAC1Q9H158 963 aa17.18■□□□□ 0.34
LIMD2-209ENST00000580222 EXOSC3Q9NQT5 275 aaKnown RBP17.18■□□□□ 0.34
LIMD2-209ENST00000580222 RLIMQ9NVW2 624 aa17.18■□□□□ 0.34
LIMD2-209ENST00000580222 ADPRHL2Q9NX46 363 aa17.18■□□□□ 0.34
LIMD2-209ENST00000580222 CLEC4AQ9UMR7 237 aa17.18■□□□□ 0.34
LIMD2-209ENST00000580222 MRPS18CQ9Y3D5 142 aaKnown RBP17.18■□□□□ 0.34
LIMD2-209ENST00000580222 ZNF337Q9Y3M9 751 aa17.18■□□□□ 0.34
LIMD2-209ENST00000580222 GSC2O15499 205 aa17.17■□□□□ 0.34
LIMD2-209ENST00000580222 TPST1O60507 370 aa17.17■□□□□ 0.34
LIMD2-209ENST00000580222 STAMBPO95630 424 aa17.17■□□□□ 0.34
LIMD2-209ENST00000580222 ZNF682O95780 498 aa17.17■□□□□ 0.34
LIMD2-209ENST00000580222 SERPINA1P01009 418 aa17.17■□□□□ 0.34
LIMD2-209ENST00000580222 CD8AP01732 235 aa17.17■□□□□ 0.34
LIMD2-209ENST00000580222 PPP3CBP16298 524 aa17.17■□□□□ 0.34
LIMD2-209ENST00000580222 CD247P20963 164 aa17.17■□□□□ 0.34
LIMD2-209ENST00000580222 SLC6A8P48029 635 aa17.17■□□□□ 0.34
LIMD2-209ENST00000580222 ZNF41P51814 821 aaPredicted RBP17.17■□□□□ 0.34
LIMD2-209ENST00000580222 CRYBA2P53672 197 aa17.17■□□□□ 0.34
LIMD2-209ENST00000580222 DSCR4P56555 118 aaPredicted RBP17.17■□□□□ 0.34
LIMD2-209ENST00000580222 CBFBQ13951 182 aa17.17■□□□□ 0.34
LIMD2-209ENST00000580222 GANABQ14697 944 aaKnown RBP17.17■□□□□ 0.34
LIMD2-209ENST00000580222 PON3Q15166 354 aa17.17■□□□□ 0.34
LIMD2-209ENST00000580222 FXNQ16595 210 aa17.17■□□□□ 0.34
LIMD2-209ENST00000580222 CTU2Q2VPK5 515 aaKnown RBP17.17■□□□□ 0.34
LIMD2-209ENST00000580222 PGGHGQ32M88 737 aa17.17■□□□□ 0.34
LIMD2-209ENST00000580222 GLIPR1L2Q4G1C9 344 aa17.17■□□□□ 0.34
LIMD2-209ENST00000580222 CYBRD1Q53TN4 286 aa17.17■□□□□ 0.34
LIMD2-209ENST00000580222 FAM214BQ7L5A3 538 aa17.17■□□□□ 0.34
LIMD2-209ENST00000580222 ZC3HAV1Q7Z2W4 902 aaKnown RBP17.17■□□□□ 0.34
LIMD2-209ENST00000580222 CLIP4Q8N3C7 705 aa17.17■□□□□ 0.34
LIMD2-209ENST00000580222 OR5W2Q8NH69 310 aa17.17■□□□□ 0.34
LIMD2-209ENST00000580222 NSMCE2Q96MF7 247 aa17.17■□□□□ 0.34
LIMD2-209ENST00000580222 RNF145Q96MT1 663 aa17.17■□□□□ 0.34
LIMD2-209ENST00000580222 ACTR6Q9GZN1 396 aa17.17■□□□□ 0.34
LIMD2-209ENST00000580222 MUC13Q9H3R2 512 aa17.17■□□□□ 0.34
LIMD2-209ENST00000580222 PLSCR4Q9NRQ2 329 aa17.17■□□□□ 0.34
LIMD2-209ENST00000580222 BAG5Q9UL15 447 aa17.17■□□□□ 0.34
LIMD2-209ENST00000580222 ICAM5Q9UMF0 924 aa17.17■□□□□ 0.34
LIMD2-209ENST00000580222 VDAC3Q9Y277 283 aa17.17■□□□□ 0.34
LIMD2-209ENST00000580222 CHST2Q9Y4C5 530 aa17.17■□□□□ 0.34
LIMD2-209ENST00000580222 SEC14L5O43304 696 aa17.16■□□□□ 0.34
LIMD2-209ENST00000580222 FRS3O43559 492 aa17.16■□□□□ 0.34
LIMD2-209ENST00000580222 GKN3PP0CG01 181 aa17.16■□□□□ 0.34
LIMD2-209ENST00000580222 PEPDP12955 493 aa17.16■□□□□ 0.34
LIMD2-209ENST00000580222 HK1P19367 917 aa17.16■□□□□ 0.34
LIMD2-209ENST00000580222 PGCP20142 388 aa17.16■□□□□ 0.34
LIMD2-209ENST00000580222 RYKP34925 604 aa17.16■□□□□ 0.34
LIMD2-209ENST00000580222 RGS8P57771 180 aaPredicted RBP17.16■□□□□ 0.34
LIMD2-209ENST00000580222 DUSP7Q16829 419 aa17.16■□□□□ 0.34
LIMD2-209ENST00000580222 IL17RELQ6ZVW7 336 aa17.16■□□□□ 0.34
LIMD2-209ENST00000580222 GPR32P1Q8NGA4 272 aa17.16■□□□□ 0.34
LIMD2-209ENST00000580222 LZICQ8WZA0 190 aa17.16■□□□□ 0.34
LIMD2-209ENST00000580222 PROX1Q92786 737 aa17.16■□□□□ 0.34
LIMD2-209ENST00000580222 C1GALT1C1Q96EU7 318 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms