RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 CPA3P15088 417 aa8.73□□□□□ -1.01
NPLOC4-220ENST00000576940 H2AFXP16104 143 aaPredicted RBP8.73□□□□□ -1.01
NPLOC4-220ENST00000576940 TACR3P29371 465 aa8.73□□□□□ -1.01
NPLOC4-220ENST00000576940 RPL3P39023 403 aaKnown RBP8.73□□□□□ -1.01
NPLOC4-220ENST00000576940 SELENOPP49908 381 aa8.73□□□□□ -1.01
NPLOC4-220ENST00000576940 ARFIP2P53365 341 aa8.73□□□□□ -1.01
NPLOC4-220ENST00000576940 KCNJ10P78508 379 aa8.73□□□□□ -1.01
NPLOC4-220ENST00000576940 CEACAM7Q14002 265 aa8.73□□□□□ -1.01
NPLOC4-220ENST00000576940 UGT3A2Q3SY77 523 aa8.73□□□□□ -1.01
NPLOC4-220ENST00000576940 ELFN2Q5R3F8 820 aa8.73□□□□□ -1.01
NPLOC4-220ENST00000576940 PRR31Q5SQ13 230 aa8.73□□□□□ -1.01
NPLOC4-220ENST00000576940 IL23RQ5VWK5 629 aa8.73□□□□□ -1.01
NPLOC4-220ENST00000576940 KANK2Q63ZY3 851 aa8.73□□□□□ -1.01
NPLOC4-220ENST00000576940 WDR93Q6P2C0 686 aa8.73□□□□□ -1.01
NPLOC4-220ENST00000576940 SHQ1Q6PI26 577 aaKnown RBP8.73□□□□□ -1.01
NPLOC4-220ENST00000576940 PAQR6Q6TCH4 344 aa8.73□□□□□ -1.01
NPLOC4-220ENST00000576940 C16orf62Q7Z3J2 963 aa8.73□□□□□ -1.01
NPLOC4-220ENST00000576940 DDIASQ8IXT1 998 aa8.73□□□□□ -1.01
NPLOC4-220ENST00000576940 CLECL1Q8IZS7 167 aa8.73□□□□□ -1.01
NPLOC4-220ENST00000576940 CCDC63Q8NA47 563 aa8.73□□□□□ -1.01
NPLOC4-220ENST00000576940 NUP37Q8NFH4 326 aa8.73□□□□□ -1.01
NPLOC4-220ENST00000576940 CKAP2Q8WWK9 683 aa8.73□□□□□ -1.01
NPLOC4-220ENST00000576940 XAGE5Q8WWM1 108 aa8.73□□□□□ -1.01
NPLOC4-220ENST00000576940 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.73□□□□□ -1.01
NPLOC4-220ENST00000576940 CNOT9Q92600 299 aaKnown RBP8.73□□□□□ -1.01
NPLOC4-220ENST00000576940 RAB8BQ92930 207 aa8.73□□□□□ -1.01
NPLOC4-220ENST00000576940 MOAP1Q96BY2 351 aa8.73□□□□□ -1.01
NPLOC4-220ENST00000576940 DDIT4LQ96D03 193 aa8.73□□□□□ -1.01
NPLOC4-220ENST00000576940 C1orf50Q9BV19 199 aa8.73□□□□□ -1.01
NPLOC4-220ENST00000576940 DUSP26Q9BV47 211 aa8.73□□□□□ -1.01
NPLOC4-220ENST00000576940 GATA5Q9BWX5 397 aaPredicted RBP8.73□□□□□ -1.01
NPLOC4-220ENST00000576940 SAP130Q9H0E3 1048 aa8.73□□□□□ -1.01
NPLOC4-220ENST00000576940 OR51I1Q9H343 314 aa8.73□□□□□ -1.01
NPLOC4-220ENST00000576940 NELFAQ9H3P2 528 aa8.73□□□□□ -1.01
NPLOC4-220ENST00000576940 ZNF442Q9H7R0 627 aa8.73□□□□□ -1.01
NPLOC4-220ENST00000576940 DYNLRB1Q9NP97 96 aa8.73□□□□□ -1.01
NPLOC4-220ENST00000576940 PCDHGB4Q9UN71 923 aa8.73□□□□□ -1.01
NPLOC4-220ENST00000576940 SLC35A3Q9Y2D2 325 aa8.73□□□□□ -1.01
NPLOC4-220ENST00000576940 LOC105371242A0A075B767 164 aa8.72□□□□□ -1.01
NPLOC4-220ENST00000576940 ARPC4-TTLL3A0A0A6YYG9 625 aa8.72□□□□□ -1.01
NPLOC4-220ENST00000576940 PRAMEF27A3QJZ7 478 aa8.72□□□□□ -1.01
NPLOC4-220ENST00000576940 TMEM229AB2RXF0 380 aa8.72□□□□□ -1.01
NPLOC4-220ENST00000576940 PIP5K1BO14986 540 aa8.72□□□□□ -1.01
NPLOC4-220ENST00000576940 ZNF208O43345 1280 aa8.72□□□□□ -1.01
NPLOC4-220ENST00000576940 SCN2BO60939 215 aa8.72□□□□□ -1.01
NPLOC4-220ENST00000576940 GLRA3O75311 464 aa8.72□□□□□ -1.01
NPLOC4-220ENST00000576940 AK1P00568 194 aa8.72□□□□□ -1.01
NPLOC4-220ENST00000576940 IGKV3-15P01624 115 aa8.72□□□□□ -1.01
NPLOC4-220ENST00000576940 HPXP02790 462 aa8.72□□□□□ -1.01
NPLOC4-220ENST00000576940 MSMBP08118 114 aa8.72□□□□□ -1.01
NPLOC4-220ENST00000576940 EPHA1P21709 976 aa8.72□□□□□ -1.01
NPLOC4-220ENST00000576940 GPR6P46095 362 aaPredicted RBP8.72□□□□□ -1.01
NPLOC4-220ENST00000576940 OR7A5Q15622 319 aa8.72□□□□□ -1.01
NPLOC4-220ENST00000576940 MSMPQ1L6U9 139 aa8.72□□□□□ -1.01
NPLOC4-220ENST00000576940 AP1ARQ63HQ0 302 aa8.72□□□□□ -1.01
NPLOC4-220ENST00000576940 TMEM225Q6GV28 225 aa8.72□□□□□ -1.01
NPLOC4-220ENST00000576940 KRT80Q6KB66 452 aa8.72□□□□□ -1.01
NPLOC4-220ENST00000576940 RNF165Q6ZSG1 346 aa8.72□□□□□ -1.01
NPLOC4-220ENST00000576940 USP43Q70EL4 1123 aa8.72□□□□□ -1.01
NPLOC4-220ENST00000576940 C10orf107Q8IVU9 208 aa8.72□□□□□ -1.01
NPLOC4-220ENST00000576940 ARFGAP2Q8N6H7 521 aa8.72□□□□□ -1.01
NPLOC4-220ENST00000576940 NATD1Q8N6N6 113 aa8.72□□□□□ -1.01
NPLOC4-220ENST00000576940 TWIST2Q8WVJ9 160 aa8.72□□□□□ -1.01
NPLOC4-220ENST00000576940 PMM1Q92871 262 aa8.72□□□□□ -1.01
NPLOC4-220ENST00000576940 SLC35G5Q96KT7 338 aa8.72□□□□□ -1.01
NPLOC4-220ENST00000576940 C3orf30Q96M34 536 aa8.72□□□□□ -1.01
NPLOC4-220ENST00000576940 ANKRD27Q96NW4 1050 aa8.72□□□□□ -1.01
NPLOC4-220ENST00000576940 ALKBH3Q96Q83 286 aaPredicted RBP8.72□□□□□ -1.01
NPLOC4-220ENST00000576940 RBM4Q9BWF3 364 aaKnown RBP8.72□□□□□ -1.01
NPLOC4-220ENST00000576940 SF3B5Q9BWJ5 86 aaKnown RBP8.72□□□□□ -1.01
NPLOC4-220ENST00000576940 RACGAP1Q9H0H5 632 aa8.72□□□□□ -1.01
NPLOC4-220ENST00000576940 ZNF696Q9H7X3 374 aa8.72□□□□□ -1.01
NPLOC4-220ENST00000576940 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.72□□□□□ -1.01
NPLOC4-220ENST00000576940 EXD2Q9NVH0 621 aa8.72□□□□□ -1.01
NPLOC4-220ENST00000576940 ATAD3AQ9NVI7 634 aa8.72□□□□□ -1.01
NPLOC4-220ENST00000576940 FBXO9Q9UK97 447 aaPredicted RBP8.72□□□□□ -1.01
NPLOC4-220ENST00000576940 USP22Q9UPT9 525 aa8.72□□□□□ -1.01
NPLOC4-220ENST00000576940 GRIP1Q9Y3R0 1128 aa8.72□□□□□ -1.01
NPLOC4-220ENST00000576940 WDR45Q9Y484 360 aa8.72□□□□□ -1.01
NPLOC4-220ENST00000576940 PRKDCP78527 4128 aaKnown RBP8.72□□□□□ -1.01
NPLOC4-220ENST00000576940 IGHV2OR16-5A0A0B4J2B6 119 aa8.71□□□□□ -1.02
NPLOC4-220ENST00000576940 ZNF503-AS2A6NEH8 195 aa8.71□□□□□ -1.02
NPLOC4-220ENST00000576940 LIPT2A6NK58 231 aa8.71□□□□□ -1.02
NPLOC4-220ENST00000576940 ZNF587BE7ETH6 402 aa8.71□□□□□ -1.02
NPLOC4-220ENST00000576940 RIPK2O43353 540 aa8.71□□□□□ -1.02
NPLOC4-220ENST00000576940 LYPLA1O75608 230 aaPredicted RBP8.71□□□□□ -1.02
NPLOC4-220ENST00000576940 CHEK2O96017 543 aa8.71□□□□□ -1.02
NPLOC4-220ENST00000576940 C1QCP02747 245 aa8.71□□□□□ -1.02
NPLOC4-220ENST00000576940 CHRNGP07510 517 aa8.71□□□□□ -1.02
NPLOC4-220ENST00000576940 FGF4P08620 206 aa8.71□□□□□ -1.02
NPLOC4-220ENST00000576940 ABHD2P08910 425 aa8.71□□□□□ -1.02
NPLOC4-220ENST00000576940 GAAP10253 952 aa8.71□□□□□ -1.02
NPLOC4-220ENST00000576940 CBR1P16152 277 aa8.71□□□□□ -1.02
NPLOC4-220ENST00000576940 HTR3AP46098 478 aa8.71□□□□□ -1.02
NPLOC4-220ENST00000576940 CCT5P48643 541 aa8.71□□□□□ -1.02
NPLOC4-220ENST00000576940 KHKP50053 298 aa8.71□□□□□ -1.02
NPLOC4-220ENST00000576940 POLR2HP52434 150 aaKnown RBP8.71□□□□□ -1.02
NPLOC4-220ENST00000576940 SEC24CP53992 1094 aa8.71□□□□□ -1.02
NPLOC4-220ENST00000576940 ARF1P84077 181 aaKnown RBP8.71□□□□□ -1.02
NPLOC4-220ENST00000576940 FUT5Q11128 374 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms