RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 ALG1L2C9J202 215 aa12.8□□□□□ -0.36
VPS33B-208ENST00000574755 KHNYNO15037 678 aaKnown RBP12.8□□□□□ -0.36
VPS33B-208ENST00000574755 DLGAP3O95886 979 aa12.8□□□□□ -0.36
VPS33B-208ENST00000574755 NAA10P41227 235 aaPredicted RBP12.8□□□□□ -0.36
VPS33B-208ENST00000574755 HCCSP53701 268 aa12.8□□□□□ -0.36
VPS33B-208ENST00000574755 PNLIPRP2P54317 469 aa12.8□□□□□ -0.36
VPS33B-208ENST00000574755 TAS2R43P59537 309 aa12.8□□□□□ -0.36
VPS33B-208ENST00000574755 DEFA1P59665 94 aa12.8□□□□□ -0.36
VPS33B-208ENST00000574755 DEFA3P59666 94 aa12.8□□□□□ -0.36
VPS33B-208ENST00000574755 LGALS3BPQ08380 585 aa12.8□□□□□ -0.36
VPS33B-208ENST00000574755 SQSTM1Q13501 440 aa12.8□□□□□ -0.36
VPS33B-208ENST00000574755 NKAIN1Q4KMZ8 207 aa12.8□□□□□ -0.36
VPS33B-208ENST00000574755 ZMAT1Q5H9K5 638 aa12.8□□□□□ -0.36
VPS33B-208ENST00000574755 VASH1Q7L8A9 365 aaPredicted RBP12.8□□□□□ -0.36
VPS33B-208ENST00000574755 SSX6Q7RTT6 188 aa12.8□□□□□ -0.36
VPS33B-208ENST00000574755 RFLNBQ8N5W9 214 aa12.8□□□□□ -0.36
VPS33B-208ENST00000574755 POMGNT2Q8NAT1 580 aa12.8□□□□□ -0.36
VPS33B-208ENST00000574755 OR6K6Q8NGW6 343 aa12.8□□□□□ -0.36
VPS33B-208ENST00000574755 EDAQ92838 391 aa12.8□□□□□ -0.36
VPS33B-208ENST00000574755 KTI12Q96EK9 354 aaPredicted RBP12.8□□□□□ -0.36
VPS33B-208ENST00000574755 GPX7Q96SL4 187 aaPredicted RBP12.8□□□□□ -0.36
VPS33B-208ENST00000574755 GAREM1Q9H706 876 aa12.8□□□□□ -0.36
VPS33B-208ENST00000574755 CPNE5Q9HCH3 593 aa12.8□□□□□ -0.36
VPS33B-208ENST00000574755 RARRES3Q9UL19 164 aa12.8□□□□□ -0.36
VPS33B-208ENST00000574755 TRAPPC4Q9Y296 219 aa12.8□□□□□ -0.36
VPS33B-208ENST00000574755 DMDP11532 3685 aa12.8□□□□□ -0.36
VPS33B-208ENST00000574755 SHISA3A0PJX4 238 aa12.8□□□□□ -0.36
VPS33B-208ENST00000574755 OR6C68A6NDL8 312 aa12.8□□□□□ -0.36
VPS33B-208ENST00000574755 IDSB3KWA1 339 aa12.8□□□□□ -0.36
VPS33B-208ENST00000574755 DVL2O14641 736 aa12.8□□□□□ -0.36
VPS33B-208ENST00000574755 IMPA2O14732 288 aa12.8□□□□□ -0.36
VPS33B-208ENST00000574755 SCO2O43819 266 aa12.8□□□□□ -0.36
VPS33B-208ENST00000574755 IDH3BO43837 385 aa12.8□□□□□ -0.36
VPS33B-208ENST00000574755 NCR1O76036 304 aa12.8□□□□□ -0.36
VPS33B-208ENST00000574755 PTTG1O95997 202 aa12.8□□□□□ -0.36
VPS33B-208ENST00000574755 TFP02787 698 aa12.8□□□□□ -0.36
VPS33B-208ENST00000574755 HEXBP07686 556 aa12.8□□□□□ -0.36
VPS33B-208ENST00000574755 GAAP10253 952 aa12.8□□□□□ -0.36
VPS33B-208ENST00000574755 AZGP1P25311 298 aaKnown RBP12.8□□□□□ -0.36
VPS33B-208ENST00000574755 PYCR1P32322 319 aa12.8□□□□□ -0.36
VPS33B-208ENST00000574755 SLC3A1Q07837 685 aa12.8□□□□□ -0.36
VPS33B-208ENST00000574755 GGTLC2Q14390 218 aa12.8□□□□□ -0.36
VPS33B-208ENST00000574755 TOMM34Q15785 309 aaPredicted RBP12.8□□□□□ -0.36
VPS33B-208ENST00000574755 ZNF79Q15937 498 aa12.8□□□□□ -0.36
VPS33B-208ENST00000574755 ALG10Q5BKT4 473 aa12.8□□□□□ -0.36
VPS33B-208ENST00000574755 PWWP2BQ6NUJ5 590 aa12.8□□□□□ -0.36
VPS33B-208ENST00000574755 FAM131AQ6UXB0 335 aa12.8□□□□□ -0.36
VPS33B-208ENST00000574755 RPTNQ6XPR3 784 aa12.8□□□□□ -0.36
VPS33B-208ENST00000574755 EID2Q8N6I1 236 aa12.8□□□□□ -0.36
VPS33B-208ENST00000574755 ZNF441Q8N8Z8 693 aa12.8□□□□□ -0.36
VPS33B-208ENST00000574755 NLGN4YQ8NFZ3 816 aaPredicted RBP12.8□□□□□ -0.36
VPS33B-208ENST00000574755 ZPLD1Q8TCW7 415 aa12.8□□□□□ -0.36
VPS33B-208ENST00000574755 LIPHQ8WWY8 451 aa12.8□□□□□ -0.36
VPS33B-208ENST00000574755 DIRAS2Q96HU8 199 aa12.8□□□□□ -0.36
VPS33B-208ENST00000574755 Q96M85 177 aa12.8□□□□□ -0.36
VPS33B-208ENST00000574755 ADAM19Q9H013 955 aa12.8□□□□□ -0.36
VPS33B-208ENST00000574755 MIXL1Q9H2W2 232 aa12.8□□□□□ -0.36
VPS33B-208ENST00000574755 MARCH7Q9H992 704 aa12.8□□□□□ -0.36
VPS33B-208ENST00000574755 NOX1Q9Y5S8 564 aa12.8□□□□□ -0.36
VPS33B-208ENST00000574755 IGLV3-12A0A075B6K2 115 aa12.79□□□□□ -0.36
VPS33B-208ENST00000574755 BOLA2-SMG1P6H3BVE0 249 aa12.79□□□□□ -0.36
VPS33B-208ENST00000574755 PLPP2O43688 288 aa12.79□□□□□ -0.36
VPS33B-208ENST00000574755 OR2T7P0C7T2 308 aa12.79□□□□□ -0.36
VPS33B-208ENST00000574755 ASAH2BP0C7U1 165 aa12.79□□□□□ -0.36
VPS33B-208ENST00000574755 SPI1P17947 270 aa12.79□□□□□ -0.36
VPS33B-208ENST00000574755 F8A1P23610 371 aa12.79□□□□□ -0.36
VPS33B-208ENST00000574755 CXCR1P25024 350 aa12.79□□□□□ -0.36
VPS33B-208ENST00000574755 RPS5P46782 204 aaKnown RBP12.79□□□□□ -0.36
VPS33B-208ENST00000574755 RNF4P78317 190 aa12.79□□□□□ -0.36
VPS33B-208ENST00000574755 E2F1Q01094 437 aa12.79□□□□□ -0.36
VPS33B-208ENST00000574755 CDC20Q12834 499 aa12.79□□□□□ -0.36
VPS33B-208ENST00000574755 ISXQ2M1V0 245 aa12.79□□□□□ -0.36
VPS33B-208ENST00000574755 LEG1Q6P5S2 330 aa12.79□□□□□ -0.36
VPS33B-208ENST00000574755 GALNT6Q8NCL4 622 aa12.79□□□□□ -0.36
VPS33B-208ENST00000574755 C17orf47Q8NEP4 570 aa12.79□□□□□ -0.36
VPS33B-208ENST00000574755 OR2T27Q8NH04 317 aa12.79□□□□□ -0.36
VPS33B-208ENST00000574755 ZNRF4Q8WWF5 429 aa12.79□□□□□ -0.36
VPS33B-208ENST00000574755 CCDC74BQ96LY2 380 aa12.79□□□□□ -0.36
VPS33B-208ENST00000574755 C12orf10Q9HB07 376 aa12.79□□□□□ -0.36
VPS33B-208ENST00000574755 COMMD3Q9UBI1 195 aa12.79□□□□□ -0.36
VPS33B-208ENST00000574755 PCDHGB7Q9Y5F8 929 aa12.79□□□□□ -0.36
VPS33B-208ENST00000574755 LAMTOR5O43504 91 aa12.79□□□□□ -0.36
VPS33B-208ENST00000574755 EIF4E2O60573 245 aaKnown RBP12.79□□□□□ -0.36
VPS33B-208ENST00000574755 F13BP05160 661 aa12.79□□□□□ -0.36
VPS33B-208ENST00000574755 PGCP20142 388 aa12.79□□□□□ -0.36
VPS33B-208ENST00000574755 EVI2BP34910 448 aa12.79□□□□□ -0.36
VPS33B-208ENST00000574755 NRG3P56975 720 aa12.79□□□□□ -0.36
VPS33B-208ENST00000574755 CTXN1P60606 82 aa12.79□□□□□ -0.36
VPS33B-208ENST00000574755 LTBQ06643 244 aa12.79□□□□□ -0.36
VPS33B-208ENST00000574755 KRR1Q13601 381 aaKnown RBP12.79□□□□□ -0.36
VPS33B-208ENST00000574755 TP53I3Q53FA7 332 aa12.79□□□□□ -0.36
VPS33B-208ENST00000574755 AGAP7PQ5VUJ5 663 aa12.79□□□□□ -0.36
VPS33B-208ENST00000574755 NANOGNBQ7Z5D8 188 aa12.79□□□□□ -0.36
VPS33B-208ENST00000574755 JAZF1Q86VZ6 243 aa12.79□□□□□ -0.36
VPS33B-208ENST00000574755 SLC35F2Q8IXU6 374 aa12.79□□□□□ -0.36
VPS33B-208ENST00000574755 FAM181AQ8N9Y4 354 aa12.79□□□□□ -0.36
VPS33B-208ENST00000574755 OR5J2Q8NH18 312 aa12.79□□□□□ -0.36
VPS33B-208ENST00000574755 LPAR4Q99677 370 aa12.79□□□□□ -0.36
VPS33B-208ENST00000574755 NEURL2Q9BR09 285 aa12.79□□□□□ -0.36
VPS33B-208ENST00000574755 MESP1Q9BRJ9 268 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms