RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 CBLL1Q75N03 491 aa11.9□□□□□ -0.5
CCDC40-205ENST00000571028 P4HA3Q7Z4N8 544 aa11.9□□□□□ -0.5
CCDC40-205ENST00000571028 ADGRG3Q86Y34 549 aa11.9□□□□□ -0.5
CCDC40-205ENST00000571028 ELOA3Q8NG57 546 aa11.9□□□□□ -0.5
CCDC40-205ENST00000571028 OR10D3Q8NH80 312 aa11.9□□□□□ -0.5
CCDC40-205ENST00000571028 OR2V1Q8NHB1 315 aa11.9□□□□□ -0.5
CCDC40-205ENST00000571028 OSTF1Q92882 214 aa11.9□□□□□ -0.5
CCDC40-205ENST00000571028 MCUR1Q96AQ8 359 aa11.9□□□□□ -0.5
CCDC40-205ENST00000571028 KLHL15Q96M94 604 aa11.9□□□□□ -0.5
CCDC40-205ENST00000571028 NSMCE2Q96MF7 247 aa11.9□□□□□ -0.5
CCDC40-205ENST00000571028 PRRG4Q9BZD6 226 aa11.9□□□□□ -0.5
CCDC40-205ENST00000571028 TRIM2Q9C040 744 aa11.9□□□□□ -0.5
CCDC40-205ENST00000571028 RPS6KA6Q9UK32 745 aa11.9□□□□□ -0.5
CCDC40-205ENST00000571028 PRPF19Q9UMS4 504 aaKnown RBP11.9□□□□□ -0.5
CCDC40-205ENST00000571028 SNX13Q9Y5W8 968 aa11.9□□□□□ -0.5
CCDC40-205ENST00000571028 SPIN1Q9Y657 262 aaPredicted RBP11.9□□□□□ -0.5
CCDC40-205ENST00000571028 TMEM229AB2RXF0 380 aa11.89□□□□□ -0.51
CCDC40-205ENST00000571028 DNAJC8O75937 253 aaPredicted RBP11.89□□□□□ -0.51
CCDC40-205ENST00000571028 ATP5HO75947 161 aa11.89□□□□□ -0.51
CCDC40-205ENST00000571028 PRKD3O94806 890 aa11.89□□□□□ -0.51
CCDC40-205ENST00000571028 STAMBPO95630 424 aa11.89□□□□□ -0.51
CCDC40-205ENST00000571028 ELK4P28324 431 aa11.89□□□□□ -0.51
CCDC40-205ENST00000571028 CEACAM8P31997 349 aaPredicted RBP11.89□□□□□ -0.51
CCDC40-205ENST00000571028 OPRM1P35372 400 aa11.89□□□□□ -0.51
CCDC40-205ENST00000571028 TIMP3P35625 211 aa11.89□□□□□ -0.51
CCDC40-205ENST00000571028 RASSF2P50749 326 aa11.89□□□□□ -0.51
CCDC40-205ENST00000571028 CARD18P57730 90 aa11.89□□□□□ -0.51
CCDC40-205ENST00000571028 MS4A2Q01362 244 aa11.89□□□□□ -0.51
CCDC40-205ENST00000571028 BCL2A1Q16548 175 aa11.89□□□□□ -0.51
CCDC40-205ENST00000571028 IFI44LQ53G44 452 aa11.89□□□□□ -0.51
CCDC40-205ENST00000571028 ALG10BQ5I7T1 473 aa11.89□□□□□ -0.51
CCDC40-205ENST00000571028 SEM1Q6ZVN7 128 aa11.89□□□□□ -0.51
CCDC40-205ENST00000571028 GGNQ86UU5 652 aa11.89□□□□□ -0.51
CCDC40-205ENST00000571028 ARHGAP24Q8N264 748 aa11.89□□□□□ -0.51
CCDC40-205ENST00000571028 ROBO4Q8WZ75 1007 aa11.89□□□□□ -0.51
CCDC40-205ENST00000571028 SLC35B4Q969S0 331 aa11.89□□□□□ -0.51
CCDC40-205ENST00000571028 C3orf49Q96BT1 292 aa11.89□□□□□ -0.51
CCDC40-205ENST00000571028 PERPQ96FX8 193 aa11.89□□□□□ -0.51
CCDC40-205ENST00000571028 DACH2Q96NX9 599 aa11.89□□□□□ -0.51
CCDC40-205ENST00000571028 CCL19Q99731 98 aa11.89□□□□□ -0.51
CCDC40-205ENST00000571028 PIP5K1AQ99755 562 aa11.89□□□□□ -0.51
CCDC40-205ENST00000571028 ADAM19Q9H013 955 aa11.89□□□□□ -0.51
CCDC40-205ENST00000571028 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.89□□□□□ -0.51
CCDC40-205ENST00000571028 DNAJC13O75165 2243 aa11.88□□□□□ -0.51
CCDC40-205ENST00000571028 HEATR5AQ86XA9 2040 aa11.88□□□□□ -0.51
CCDC40-205ENST00000571028 ZC3H12DA2A288 527 aaKnown RBP11.88□□□□□ -0.51
CCDC40-205ENST00000571028 ETV2O00321 342 aaPredicted RBP11.88□□□□□ -0.51
CCDC40-205ENST00000571028 GSC2O15499 205 aa11.88□□□□□ -0.51
CCDC40-205ENST00000571028 CRLF1O75462 422 aa11.88□□□□□ -0.51
CCDC40-205ENST00000571028 SYNGR4O95473 234 aa11.88□□□□□ -0.51
CCDC40-205ENST00000571028 IFNA2P01563 188 aa11.88□□□□□ -0.51
CCDC40-205ENST00000571028 ATP6V1B2P21281 511 aa11.88□□□□□ -0.51
CCDC40-205ENST00000571028 ERFP50548 548 aa11.88□□□□□ -0.51
CCDC40-205ENST00000571028 AGFG1P52594 562 aaKnown RBP11.88□□□□□ -0.51
CCDC40-205ENST00000571028 CDH12P55289 794 aa11.88□□□□□ -0.51
CCDC40-205ENST00000571028 OR2B6P58173 313 aa11.88□□□□□ -0.51
CCDC40-205ENST00000571028 TAS2R41P59536 307 aa11.88□□□□□ -0.51
CCDC40-205ENST00000571028 TRIM25Q14258 630 aaKnown RBP11.88□□□□□ -0.51
CCDC40-205ENST00000571028 PON3Q15166 354 aa11.88□□□□□ -0.51
CCDC40-205ENST00000571028 CTU2Q2VPK5 515 aaKnown RBP11.88□□□□□ -0.51
CCDC40-205ENST00000571028 SYT14P1Q58G82 188 aa11.88□□□□□ -0.51
CCDC40-205ENST00000571028 ESPNLQ6ZVH7 1005 aa11.88□□□□□ -0.51
CCDC40-205ENST00000571028 ATG4DQ86TL0 474 aaPredicted RBP11.88□□□□□ -0.51
CCDC40-205ENST00000571028 DHFR2Q86XF0 187 aa11.88□□□□□ -0.51
CCDC40-205ENST00000571028 FAM86B1Q8N7N1 296 aa11.88□□□□□ -0.51
CCDC40-205ENST00000571028 ZPLD1Q8TCW7 415 aa11.88□□□□□ -0.51
CCDC40-205ENST00000571028 DDIT4LQ96D03 193 aa11.88□□□□□ -0.51
CCDC40-205ENST00000571028 ARL5BQ96KC2 179 aa11.88□□□□□ -0.51
CCDC40-205ENST00000571028 LRGUKQ96M69 825 aa11.88□□□□□ -0.51
CCDC40-205ENST00000571028 CADM1Q9BY67 442 aaKnown RBP11.88□□□□□ -0.51
CCDC40-205ENST00000571028 AMBRA1Q9C0C7 1298 aa11.88□□□□□ -0.51
CCDC40-205ENST00000571028 EVA1AQ9H8M9 152 aa11.88□□□□□ -0.51
CCDC40-205ENST00000571028 GORASP2Q9H8Y8 452 aa11.88□□□□□ -0.51
CCDC40-205ENST00000571028 DCAF13Q9NV06 445 aaKnown RBP11.88□□□□□ -0.51
CCDC40-205ENST00000571028 RHCGQ9UBD6 479 aa11.88□□□□□ -0.51
CCDC40-205ENST00000571028 SLC7A7Q9UM01 511 aa11.88□□□□□ -0.51
CCDC40-205ENST00000571028 SAMD4AQ9UPU9 718 aaKnown RBP11.88□□□□□ -0.51
CCDC40-205ENST00000571028 IGHV3-15A0A0B4J1V0 119 aa11.87□□□□□ -0.51
CCDC40-205ENST00000571028 SH3D21A4FU49 640 aa11.87□□□□□ -0.51
CCDC40-205ENST00000571028 SLC22A20A6NK97 555 aa11.87□□□□□ -0.51
CCDC40-205ENST00000571028 J3KTA2 159 aa11.87□□□□□ -0.51
CCDC40-205ENST00000571028 hCG_2039718K7EN88 272 aa11.87□□□□□ -0.51
CCDC40-205ENST00000571028 SULT2B1O00204 365 aa11.87□□□□□ -0.51
CCDC40-205ENST00000571028 TGM6O95932 706 aa11.87□□□□□ -0.51
CCDC40-205ENST00000571028 IFNW1P05000 195 aa11.87□□□□□ -0.51
CCDC40-205ENST00000571028 FPR1P21462 350 aa11.87□□□□□ -0.51
CCDC40-205ENST00000571028 CBLP22681 906 aa11.87□□□□□ -0.51
CCDC40-205ENST00000571028 CTSSP25774 331 aa11.87□□□□□ -0.51
CCDC40-205ENST00000571028 PIN1Q13526 163 aaPredicted RBP11.87□□□□□ -0.51
CCDC40-205ENST00000571028 SPATS1Q496A3 300 aa11.87□□□□□ -0.51
CCDC40-205ENST00000571028 NSUN5P2Q63ZY6 315 aa11.87□□□□□ -0.51
CCDC40-205ENST00000571028 HMBOX1Q6NT76 420 aa11.87□□□□□ -0.51
CCDC40-205ENST00000571028 ULK3Q6PHR2 472 aa11.87□□□□□ -0.51
CCDC40-205ENST00000571028 TSPYL5Q86VY4 417 aaPredicted RBP11.87□□□□□ -0.51
CCDC40-205ENST00000571028 PHC2Q8IXK0 858 aa11.87□□□□□ -0.51
CCDC40-205ENST00000571028 LSMEM1Q8N8F7 131 aa11.87□□□□□ -0.51
CCDC40-205ENST00000571028 C9orf106Q8NAJ2 232 aa11.87□□□□□ -0.51
CCDC40-205ENST00000571028 FNDC9Q8TBE3 224 aa11.87□□□□□ -0.51
CCDC40-205ENST00000571028 ADAMTS16Q8TE57 1224 aa11.87□□□□□ -0.51
CCDC40-205ENST00000571028 SLC25A43Q8WUT9 341 aaPredicted RBP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms