RNA–Protein interactions for RNA: ENST00000569337.1

UBR1-210, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 5

Gene UBR1, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-210ENST00000569337 TESMINQ9Y4I5 508 aa8.41□□□□□ -1.06
UBR1-210ENST00000569337 NAV2Q8IVL1 2488 aa8.41□□□□□ -1.06
UBR1-210ENST00000569337 PCNX1Q96RV3 2341 aa8.4□□□□□ -1.06
UBR1-210ENST00000569337 IGKV1D-42A0A075B6H8 117 aa8.4□□□□□ -1.06
UBR1-210ENST00000569337 TMED7-TICAM2A0A0A6YYA0 188 aa8.4□□□□□ -1.06
UBR1-210ENST00000569337 TRBV4-1A0A0J9YWV2 114 aa8.4□□□□□ -1.06
UBR1-210ENST00000569337 A0A1W2PNV4 684 aa8.4□□□□□ -1.06
UBR1-210ENST00000569337 TMEM72A0PK05 275 aa8.4□□□□□ -1.06
UBR1-210ENST00000569337 ZC3H12DA2A288 527 aaKnown RBP8.4□□□□□ -1.06
UBR1-210ENST00000569337 C7orf72A4D263 438 aa8.4□□□□□ -1.06
UBR1-210ENST00000569337 ENO4A6NNW6 628 aa8.4□□□□□ -1.06
UBR1-210ENST00000569337 SMNDC1O75940 238 aaKnown RBP eCLIP8.4□□□□□ -1.06
UBR1-210ENST00000569337 OPN1LWP04000 364 aa8.4□□□□□ -1.06
UBR1-210ENST00000569337 CRHP06850 196 aa8.4□□□□□ -1.06
UBR1-210ENST00000569337 CCNA2P20248 432 aa8.4□□□□□ -1.06
UBR1-210ENST00000569337 RRM2P31350 389 aa8.4□□□□□ -1.06
UBR1-210ENST00000569337 EIF1AXP47813 144 aaKnown RBP8.4□□□□□ -1.06
UBR1-210ENST00000569337 LIMS1P48059 325 aa8.4□□□□□ -1.06
UBR1-210ENST00000569337 COPZ1P61923 177 aa8.4□□□□□ -1.06
UBR1-210ENST00000569337 EGR4Q05215 589 aa8.4□□□□□ -1.06
UBR1-210ENST00000569337 MERTKQ12866 999 aa8.4□□□□□ -1.06
UBR1-210ENST00000569337 PON3Q15166 354 aa8.4□□□□□ -1.06
UBR1-210ENST00000569337 SEC23BQ15437 767 aa8.4□□□□□ -1.06
UBR1-210ENST00000569337 ALG10BQ5I7T1 473 aa8.4□□□□□ -1.06
UBR1-210ENST00000569337 PDSS1Q5T2R2 415 aa8.4□□□□□ -1.06
UBR1-210ENST00000569337 OR2T5Q6IEZ7 315 aa8.4□□□□□ -1.06
UBR1-210ENST00000569337 PPP4R4Q6NUP7 873 aa8.4□□□□□ -1.06
UBR1-210ENST00000569337 ULK3Q6PHR2 472 aa8.4□□□□□ -1.06
UBR1-210ENST00000569337 TBPL2Q6SJ96 375 aa8.4□□□□□ -1.06
UBR1-210ENST00000569337 GRINAQ7Z429 371 aa8.4□□□□□ -1.06
UBR1-210ENST00000569337 AMIGO2Q86SJ2 522 aa8.4□□□□□ -1.06
UBR1-210ENST00000569337 GGNQ86UU5 652 aa8.4□□□□□ -1.06
UBR1-210ENST00000569337 TMEM200AQ86VY9 491 aa8.4□□□□□ -1.06
UBR1-210ENST00000569337 MED12LQ86YW9 2145 aa8.4□□□□□ -1.06
UBR1-210ENST00000569337 P3H2Q8IVL5 708 aa8.4□□□□□ -1.06
UBR1-210ENST00000569337 CNEP1R1Q8N9A8 125 aa8.4□□□□□ -1.06
UBR1-210ENST00000569337 OR4C15Q8NGM1 316 aa8.4□□□□□ -1.06
UBR1-210ENST00000569337 OR2T29Q8NH02 315 aa8.4□□□□□ -1.06
UBR1-210ENST00000569337 OR52J3Q8NH60 311 aa8.4□□□□□ -1.06
UBR1-210ENST00000569337 FNDC9Q8TBE3 224 aa8.4□□□□□ -1.06
UBR1-210ENST00000569337 TMEM234Q8WY98 164 aa8.4□□□□□ -1.06
UBR1-210ENST00000569337 SLC38A4Q969I6 547 aa8.4□□□□□ -1.06
UBR1-210ENST00000569337 ZNF845Q96IR2 970 aaPredicted RBP8.4□□□□□ -1.06
UBR1-210ENST00000569337 PKP2Q99959 881 aa8.4□□□□□ -1.06
UBR1-210ENST00000569337 ZNF426Q9BUY5 554 aa8.4□□□□□ -1.06
UBR1-210ENST00000569337 FNDC11Q9BVV2 318 aa8.4□□□□□ -1.06
UBR1-210ENST00000569337 RBM24Q9BX46 236 aaKnown RBP8.4□□□□□ -1.06
UBR1-210ENST00000569337 TMEM185BQ9H7F4 350 aa8.4□□□□□ -1.06
UBR1-210ENST00000569337 PAQR5Q9NXK6 330 aaPredicted RBP8.4□□□□□ -1.06
UBR1-210ENST00000569337 CRIM1Q9NZV1 1036 aa8.4□□□□□ -1.06
UBR1-210ENST00000569337 JKAMPQ9P055 326 aa8.4□□□□□ -1.06
UBR1-210ENST00000569337 TMED7Q9Y3B3 224 aa8.4□□□□□ -1.06
UBR1-210ENST00000569337 ZNF175Q9Y473 711 aa8.4□□□□□ -1.06
UBR1-210ENST00000569337 CENPEQ02224 2701 aa8.4□□□□□ -1.06
UBR1-210ENST00000569337 A0A087WUJ7 227 aa8.39□□□□□ -1.07
UBR1-210ENST00000569337 TUBAL3A6NHL2 446 aa8.39□□□□□ -1.07
UBR1-210ENST00000569337 A8MXE2 369 aa8.39□□□□□ -1.07
UBR1-210ENST00000569337 MSTNO14793 375 aa8.39□□□□□ -1.07
UBR1-210ENST00000569337 CLOCKO15516 846 aa8.39□□□□□ -1.07
UBR1-210ENST00000569337 CHP2O43745 196 aa8.39□□□□□ -1.07
UBR1-210ENST00000569337 TNFSF13O75888 250 aa8.39□□□□□ -1.07
UBR1-210ENST00000569337 SYNGR4O95473 234 aa8.39□□□□□ -1.07
UBR1-210ENST00000569337 CST1P01037 141 aa8.39□□□□□ -1.07
UBR1-210ENST00000569337 H1F0P07305 194 aaKnown RBP8.39□□□□□ -1.07
UBR1-210ENST00000569337 FCGR2AP12318 317 aa8.39□□□□□ -1.07
UBR1-210ENST00000569337 UQCRBP14927 111 aa8.39□□□□□ -1.07
UBR1-210ENST00000569337 ITGA2P17301 1181 aa8.39□□□□□ -1.07
UBR1-210ENST00000569337 ADH6P28332 368 aa8.39□□□□□ -1.07
UBR1-210ENST00000569337 POLR2HP52434 150 aaKnown RBP8.39□□□□□ -1.07
UBR1-210ENST00000569337 HMGA2P52926 109 aa8.39□□□□□ -1.07
UBR1-210ENST00000569337 UGT2B15P54855 530 aa8.39□□□□□ -1.07
UBR1-210ENST00000569337 KRTAP10-9P60411 292 aa8.39□□□□□ -1.07
UBR1-210ENST00000569337 SIRPAP78324 504 aa8.39□□□□□ -1.07
UBR1-210ENST00000569337 SORDQ00796 357 aa8.39□□□□□ -1.07
UBR1-210ENST00000569337 SPIBQ01892 262 aa8.39□□□□□ -1.07
UBR1-210ENST00000569337 LAPTM4AQ15012 233 aa8.39□□□□□ -1.07
UBR1-210ENST00000569337 ATP6AP1Q15904 470 aa8.39□□□□□ -1.07
UBR1-210ENST00000569337 EXOC3L2Q2M3D2 409 aa8.39□□□□□ -1.07
UBR1-210ENST00000569337 HBMQ6B0K9 141 aa8.39□□□□□ -1.07
UBR1-210ENST00000569337 PODNL1Q6PEZ8 512 aa8.39□□□□□ -1.07
UBR1-210ENST00000569337 ESPNLQ6ZVH7 1005 aa8.39□□□□□ -1.07
UBR1-210ENST00000569337 CYP4Z1Q86W10 505 aa8.39□□□□□ -1.07
UBR1-210ENST00000569337 MEX3DQ86XN8 651 aaKnown RBP8.39□□□□□ -1.07
UBR1-210ENST00000569337 HS3ST5Q8IZT8 346 aa8.39□□□□□ -1.07
UBR1-210ENST00000569337 OR10D3Q8NH80 312 aa8.39□□□□□ -1.07
UBR1-210ENST00000569337 OR2V1Q8NHB1 315 aa8.39□□□□□ -1.07
UBR1-210ENST00000569337 SLC7A13Q8TCU3 470 aa8.39□□□□□ -1.07
UBR1-210ENST00000569337 FAM222BQ8WU58 562 aa8.39□□□□□ -1.07
UBR1-210ENST00000569337 TMEM255BQ8WV15 326 aa8.39□□□□□ -1.07
UBR1-210ENST00000569337 DNAJA4Q8WW22 397 aaPredicted RBP8.39□□□□□ -1.07
UBR1-210ENST00000569337 OSTF1Q92882 214 aa8.39□□□□□ -1.07
UBR1-210ENST00000569337 DNAJA3Q96EY1 480 aa8.39□□□□□ -1.07
UBR1-210ENST00000569337 ARL5BQ96KC2 179 aa8.39□□□□□ -1.07
UBR1-210ENST00000569337 ZNF347Q96SE7 839 aa8.39□□□□□ -1.07
UBR1-210ENST00000569337 OR11A1Q9GZK7 315 aa8.39□□□□□ -1.07
UBR1-210ENST00000569337 POLR2J2Q9GZM3 115 aaKnown RBP8.39□□□□□ -1.07
UBR1-210ENST00000569337 POLR2J3Q9H1A7 115 aaKnown RBP8.39□□□□□ -1.07
UBR1-210ENST00000569337 SEMA6AQ9H2E6 1030 aa8.39□□□□□ -1.07
UBR1-210ENST00000569337 RNF122Q9H9V4 155 aa8.39□□□□□ -1.07
UBR1-210ENST00000569337 MEPEQ9NQ76 525 aaPredicted RBP8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms