RNA–Protein interactions for RNA: ENST00000567003.1

PALB2-205, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-205ENST00000567003 GIFP27352 417 aa13.43□□□□□ -0.26
PALB2-205ENST00000567003 THBS4P35443 961 aa13.43□□□□□ -0.26
PALB2-205ENST00000567003 SELENOPP49908 381 aa13.43□□□□□ -0.26
PALB2-205ENST00000567003 KHKP50053 298 aa13.43□□□□□ -0.26
PALB2-205ENST00000567003 PPOXP50336 477 aa13.43□□□□□ -0.26
PALB2-205ENST00000567003 CHN2P52757 468 aa13.43□□□□□ -0.26
PALB2-205ENST00000567003 CLDN8P56748 225 aa13.43□□□□□ -0.26
PALB2-205ENST00000567003 EFNB3Q15768 340 aa13.43□□□□□ -0.26
PALB2-205ENST00000567003 ANKFN1Q8N957 763 aa13.43□□□□□ -0.26
PALB2-205ENST00000567003 ZNF454Q8N9F8 522 aa13.43□□□□□ -0.26
PALB2-205ENST00000567003 LINC01356Q8N9X3 169 aa13.43□□□□□ -0.26
PALB2-205ENST00000567003 POMGNT2Q8NAT1 580 aa13.43□□□□□ -0.26
PALB2-205ENST00000567003 BCL2L2Q92843 193 aaPredicted RBP13.43□□□□□ -0.26
PALB2-205ENST00000567003 APOPT1Q96IL0 206 aa13.43□□□□□ -0.26
PALB2-205ENST00000567003 KATNB1Q9BVA0 655 aa13.43□□□□□ -0.26
PALB2-205ENST00000567003 RAB1BQ9H0U4 201 aa13.43□□□□□ -0.26
PALB2-205ENST00000567003 NELFAQ9H3P2 528 aa13.43□□□□□ -0.26
PALB2-205ENST00000567003 SH3PXD2BA1X283 911 aa13.42□□□□□ -0.26
PALB2-205ENST00000567003 LIPT2A6NK58 231 aa13.42□□□□□ -0.26
PALB2-205ENST00000567003 RNASET2O00584 256 aaKnown RBP13.42□□□□□ -0.26
PALB2-205ENST00000567003 SPRY1O43609 319 aaPredicted RBP13.42□□□□□ -0.26
PALB2-205ENST00000567003 SCN2BO60939 215 aa13.42□□□□□ -0.26
PALB2-205ENST00000567003 SPAG7O75391 227 aa13.42□□□□□ -0.26
PALB2-205ENST00000567003 UPK3AO75631 287 aa13.42□□□□□ -0.26
PALB2-205ENST00000567003 IGFBP1P08833 259 aaPredicted RBP13.42□□□□□ -0.26
PALB2-205ENST00000567003 TACSTD2P09758 323 aa13.42□□□□□ -0.26
PALB2-205ENST00000567003 FKBP2P26885 142 aaKnown RBP13.42□□□□□ -0.26
PALB2-205ENST00000567003 HTR3AP46098 478 aa13.42□□□□□ -0.26
PALB2-205ENST00000567003 CDH15P55291 814 aa13.42□□□□□ -0.26
PALB2-205ENST00000567003 UBE2NP61088 152 aaKnown RBP13.42□□□□□ -0.26
PALB2-205ENST00000567003 HPCAP84074 193 aa13.42□□□□□ -0.26
PALB2-205ENST00000567003 HGFACQ04756 655 aa13.42□□□□□ -0.26
PALB2-205ENST00000567003 BNIP2Q12982 314 aa13.42□□□□□ -0.26
PALB2-205ENST00000567003 SYPL1Q16563 259 aa13.42□□□□□ -0.26
PALB2-205ENST00000567003 SAXO2Q658L1 398 aa13.42□□□□□ -0.26
PALB2-205ENST00000567003 ANKRD16Q6P6B7 361 aa13.42□□□□□ -0.26
PALB2-205ENST00000567003 SPATA21Q7Z572 469 aa13.42□□□□□ -0.26
PALB2-205ENST00000567003 CDK20Q8IZL9 346 aa13.42□□□□□ -0.26
PALB2-205ENST00000567003 CNPY4Q8N129 248 aa13.42□□□□□ -0.26
PALB2-205ENST00000567003 ZNF540Q8NDQ6 660 aa13.42□□□□□ -0.26
PALB2-205ENST00000567003 POLE3Q9NRF9 147 aa13.42□□□□□ -0.26
PALB2-205ENST00000567003 TMEM45AQ9NWC5 275 aa13.42□□□□□ -0.26
PALB2-205ENST00000567003 CMYA5Q8N3K9 4069 aa13.41□□□□□ -0.26
PALB2-205ENST00000567003 AQP7P3A6NL99 342 aa13.41□□□□□ -0.26
PALB2-205ENST00000567003 ZNF587BE7ETH6 402 aa13.41□□□□□ -0.26
PALB2-205ENST00000567003 HMGN4O00479 90 aa13.41□□□□□ -0.26
PALB2-205ENST00000567003 PDE5AO76074 875 aa13.41□□□□□ -0.26
PALB2-205ENST00000567003 AGR2O95994 175 aa13.41□□□□□ -0.26
PALB2-205ENST00000567003 CHRM4P08173 479 aa13.41□□□□□ -0.26
PALB2-205ENST00000567003 GUSBP08236 651 aa13.41□□□□□ -0.26
PALB2-205ENST00000567003 UQCRC2P22695 453 aa13.41□□□□□ -0.26
PALB2-205ENST00000567003 SLC1A3P43003 542 aa13.41□□□□□ -0.26
PALB2-205ENST00000567003 P2RY4P51582 365 aa13.41□□□□□ -0.26
PALB2-205ENST00000567003 EPS8Q12929 822 aa13.41□□□□□ -0.26
PALB2-205ENST00000567003 PDCD2Q16342 344 aaPredicted RBP13.41□□□□□ -0.26
PALB2-205ENST00000567003 FAM174BQ3ZCQ3 159 aa13.41□□□□□ -0.26
PALB2-205ENST00000567003 AP1ARQ63HQ0 302 aa13.41□□□□□ -0.26
PALB2-205ENST00000567003 SEMA6DQ8NFY4 1073 aa13.41□□□□□ -0.26
PALB2-205ENST00000567003 ZDHHC16Q969W1 377 aa13.41□□□□□ -0.26
PALB2-205ENST00000567003 DOK1Q99704 481 aa13.41□□□□□ -0.26
PALB2-205ENST00000567003 SLC38A1Q9H2H9 487 aa13.41□□□□□ -0.26
PALB2-205ENST00000567003 TPK1Q9H3S4 243 aa13.41□□□□□ -0.26
PALB2-205ENST00000567003 OBP2BQ9NPH6 170 aa13.41□□□□□ -0.26
PALB2-205ENST00000567003 ADPRHL2Q9NX46 363 aa13.41□□□□□ -0.26
PALB2-205ENST00000567003 CRNNQ9UBG3 495 aaPredicted RBP13.41□□□□□ -0.26
PALB2-205ENST00000567003 MARCOQ9UEW3 520 aaPredicted RBP13.41□□□□□ -0.26
PALB2-205ENST00000567003 TMEM129A0AVI4 362 aa13.4□□□□□ -0.26
PALB2-205ENST00000567003 ZNF503-AS2A6NEH8 195 aa13.4□□□□□ -0.26
PALB2-205ENST00000567003 SNUPNO95149 360 aaKnown RBP13.4□□□□□ -0.26
PALB2-205ENST00000567003 IGLV1-44P01699 117 aa13.4□□□□□ -0.26
PALB2-205ENST00000567003 GPIP06744 558 aa13.4□□□□□ -0.26
PALB2-205ENST00000567003 GKN3PP0CG01 181 aa13.4□□□□□ -0.26
PALB2-205ENST00000567003 IFNGR1P15260 489 aa13.4□□□□□ -0.26
PALB2-205ENST00000567003 CHI3L1P36222 383 aaPredicted RBP13.4□□□□□ -0.26
PALB2-205ENST00000567003 EMX2Q04743 252 aa13.4□□□□□ -0.26
PALB2-205ENST00000567003 ADRM1Q16186 407 aa13.4□□□□□ -0.26
PALB2-205ENST00000567003 MRPL2Q5T653 305 aaKnown RBP13.4□□□□□ -0.26
PALB2-205ENST00000567003 NIPAL3Q6P499 406 aa13.4□□□□□ -0.26
PALB2-205ENST00000567003 RNF130Q86XS8 419 aa13.4□□□□□ -0.26
PALB2-205ENST00000567003 OR8J2Q8NGG1 315 aa13.4□□□□□ -0.26
PALB2-205ENST00000567003 WDR60Q8WVS4 1066 aa13.4□□□□□ -0.26
PALB2-205ENST00000567003 OIT3Q8WWZ8 545 aa13.4□□□□□ -0.26
PALB2-205ENST00000567003 PMM1Q92871 262 aa13.4□□□□□ -0.26
PALB2-205ENST00000567003 HPS1Q92902 700 aa13.4□□□□□ -0.26
PALB2-205ENST00000567003 NEURL3Q96EH8 262 aa13.4□□□□□ -0.26
PALB2-205ENST00000567003 BOD1Q96IK1 185 aa13.4□□□□□ -0.26
PALB2-205ENST00000567003 SLC35A5Q9BS91 424 aa13.4□□□□□ -0.26
PALB2-205ENST00000567003 SF3B5Q9BWJ5 86 aaKnown RBP13.4□□□□□ -0.26
PALB2-205ENST00000567003 NARFLQ9H6Q4 476 aa13.4□□□□□ -0.26
PALB2-205ENST00000567003 METTL17Q9H7H0 456 aaPredicted RBP13.4□□□□□ -0.26
PALB2-205ENST00000567003 LPAR2Q9HBW0 351 aa13.4□□□□□ -0.26
PALB2-205ENST00000567003 DYNLRB1Q9NP97 96 aa13.4□□□□□ -0.26
PALB2-205ENST00000567003 MKS1Q9NXB0 559 aa13.4□□□□□ -0.26
PALB2-205ENST00000567003 NOP53Q9NZM5 478 aaKnown RBP13.4□□□□□ -0.26
PALB2-205ENST00000567003 PKD1L1Q8TDX9 2849 aa13.4□□□□□ -0.27
PALB2-205ENST00000567003 TRRAPQ9Y4A5 3859 aa13.39□□□□□ -0.27
PALB2-205ENST00000567003 ARPC4-TTLL3A0A0A6YYG9 625 aa13.39□□□□□ -0.27
PALB2-205ENST00000567003 TLDC2A0PJX2 215 aa13.39□□□□□ -0.27
PALB2-205ENST00000567003 CFAP73A6NFT4 308 aa13.39□□□□□ -0.27
PALB2-205ENST00000567003 AGAP5A6NIR3 686 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms