RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 ST6GALNAC3Q8NDV1 305 aa11.38□□□□□ -0.59
SF3B3-206ENST00000565990 ZNF563Q8TA94 476 aa11.38□□□□□ -0.59
SF3B3-206ENST00000565990 CHPT1Q8WUD6 406 aa11.38□□□□□ -0.59
SF3B3-206ENST00000565990 DNAJA4Q8WW22 397 aaPredicted RBP11.38□□□□□ -0.59
SF3B3-206ENST00000565990 GEMIN6Q8WXD5 167 aaKnown RBP11.38□□□□□ -0.59
SF3B3-206ENST00000565990 SLC38A4Q969I6 547 aa11.38□□□□□ -0.59
SF3B3-206ENST00000565990 ABTB1Q969K4 478 aaPredicted RBP11.38□□□□□ -0.59
SF3B3-206ENST00000565990 ITPKCQ96DU7 683 aa11.38□□□□□ -0.59
SF3B3-206ENST00000565990 ZNF347Q96SE7 839 aa11.38□□□□□ -0.59
SF3B3-206ENST00000565990 EPYCQ99645 322 aa11.38□□□□□ -0.59
SF3B3-206ENST00000565990 SLC6A15Q9H2J7 730 aa11.38□□□□□ -0.59
SF3B3-206ENST00000565990 TMEM27Q9HBJ8 222 aa11.38□□□□□ -0.59
SF3B3-206ENST00000565990 ENOPH1Q9UHY7 261 aa11.38□□□□□ -0.59
SF3B3-206ENST00000565990 TMEFF2Q9UIK5 374 aaPredicted RBP11.38□□□□□ -0.59
SF3B3-206ENST00000565990 OSGIN1Q9UJX0 560 aa11.38□□□□□ -0.59
SF3B3-206ENST00000565990 ACAD8Q9UKU7 415 aa11.38□□□□□ -0.59
SF3B3-206ENST00000565990 A4GNTQ9UNA3 340 aa11.38□□□□□ -0.59
SF3B3-206ENST00000565990 RPH3AQ9Y2J0 694 aaPredicted RBP11.38□□□□□ -0.59
SF3B3-206ENST00000565990 SLC6A5Q9Y345 797 aa11.38□□□□□ -0.59
SF3B3-206ENST00000565990 MPDZO75970 2070 aa11.38□□□□□ -0.59
SF3B3-206ENST00000565990 FAM208BQ5VWN6 2430 aa11.37□□□□□ -0.59
SF3B3-206ENST00000565990 A0A1B0GWA3 101 aa11.37□□□□□ -0.59
SF3B3-206ENST00000565990 A0A1W2PPW3 197 aa11.37□□□□□ -0.59
SF3B3-206ENST00000565990 SHISA8B8ZZ34 492 aa11.37□□□□□ -0.59
SF3B3-206ENST00000565990 FFAR1O14842 300 aa11.37□□□□□ -0.59
SF3B3-206ENST00000565990 ZNF208O43345 1280 aa11.37□□□□□ -0.59
SF3B3-206ENST00000565990 CLIC3O95833 236 aa11.37□□□□□ -0.59
SF3B3-206ENST00000565990 IFNW1P05000 195 aa11.37□□□□□ -0.59
SF3B3-206ENST00000565990 FABP3P05413 133 aa11.37□□□□□ -0.59
SF3B3-206ENST00000565990 IL11P20809 199 aa11.37□□□□□ -0.59
SF3B3-206ENST00000565990 PCMT1P22061 227 aa11.37□□□□□ -0.59
SF3B3-206ENST00000565990 ELK4P28324 431 aa11.37□□□□□ -0.59
SF3B3-206ENST00000565990 TACR3P29371 465 aa11.37□□□□□ -0.59
SF3B3-206ENST00000565990 LHX2P50458 406 aa11.37□□□□□ -0.59
SF3B3-206ENST00000565990 CCR4P51679 360 aa11.37□□□□□ -0.59
SF3B3-206ENST00000565990 POLR2HP52434 150 aaKnown RBP11.37□□□□□ -0.59
SF3B3-206ENST00000565990 CLDN15P56746 228 aa11.37□□□□□ -0.59
SF3B3-206ENST00000565990 CDK5R2Q13319 367 aa11.37□□□□□ -0.59
SF3B3-206ENST00000565990 SYT6Q5T7P8 510 aaPredicted RBP11.37□□□□□ -0.59
SF3B3-206ENST00000565990 Q6ZPB1 254 aaPredicted RBP11.37□□□□□ -0.59
SF3B3-206ENST00000565990 PRSS48Q7RTY5 328 aa11.37□□□□□ -0.59
SF3B3-206ENST00000565990 ATG4DQ86TL0 474 aaPredicted RBP11.37□□□□□ -0.59
SF3B3-206ENST00000565990 PARP8Q8N3A8 854 aa11.37□□□□□ -0.59
SF3B3-206ENST00000565990 OR5M1Q8NGP8 315 aa11.37□□□□□ -0.59
SF3B3-206ENST00000565990 VANGL1Q8TAA9 524 aaPredicted RBP11.37□□□□□ -0.59
SF3B3-206ENST00000565990 MIB2Q96AX9 1013 aa11.37□□□□□ -0.59
SF3B3-206ENST00000565990 C3orf49Q96BT1 292 aa11.37□□□□□ -0.59
SF3B3-206ENST00000565990 SARAFQ96BY9 339 aa11.37□□□□□ -0.59
SF3B3-206ENST00000565990 WDYHV1Q96HA8 205 aa11.37□□□□□ -0.59
SF3B3-206ENST00000565990 PLEKHA8Q96JA3 519 aa11.37□□□□□ -0.59
SF3B3-206ENST00000565990 SFXN2Q96NB2 322 aa11.37□□□□□ -0.59
SF3B3-206ENST00000565990 ZNF300Q96RE9 604 aaPredicted RBP11.37□□□□□ -0.59
SF3B3-206ENST00000565990 LDAHQ9H6V9 325 aa11.37□□□□□ -0.59
SF3B3-206ENST00000565990 HMG20AQ9NP66 347 aa11.37□□□□□ -0.59
SF3B3-206ENST00000565990 CTPS2Q9NRF8 586 aa11.37□□□□□ -0.59
SF3B3-206ENST00000565990 SERINC1Q9NRX5 453 aa11.37□□□□□ -0.59
SF3B3-206ENST00000565990 NDUFAF4Q9P032 175 aa11.37□□□□□ -0.59
SF3B3-206ENST00000565990 SPRR3Q9UBC9 169 aa11.37□□□□□ -0.59
SF3B3-206ENST00000565990 ENPP4Q9Y6X5 453 aa11.37□□□□□ -0.59
SF3B3-206ENST00000565990 A0A087WUJ7 227 aa11.36□□□□□ -0.59
SF3B3-206ENST00000565990 TMED7-TICAM2A0A0A6YYA0 188 aa11.36□□□□□ -0.59
SF3B3-206ENST00000565990 TRAPPC13A5PLN9 417 aa11.36□□□□□ -0.59
SF3B3-206ENST00000565990 ADAMDEC1O15204 470 aa11.36□□□□□ -0.59
SF3B3-206ENST00000565990 OR5F1O95221 314 aa11.36□□□□□ -0.59
SF3B3-206ENST00000565990 PNMTP11086 282 aa11.36□□□□□ -0.59
SF3B3-206ENST00000565990 PEPDP12955 493 aa11.36□□□□□ -0.59
SF3B3-206ENST00000565990 ZNF708P17019 499 aa11.36□□□□□ -0.59
SF3B3-206ENST00000565990 STARP49675 285 aa11.36□□□□□ -0.59
SF3B3-206ENST00000565990 CLK1P49759 484 aaKnown RBP11.36□□□□□ -0.59
SF3B3-206ENST00000565990 CDH12P55289 794 aa11.36□□□□□ -0.59
SF3B3-206ENST00000565990 CLDN18P56856 261 aa11.36□□□□□ -0.59
SF3B3-206ENST00000565990 SLC35A2P78381 396 aa11.36□□□□□ -0.59
SF3B3-206ENST00000565990 VLDLRP98155 873 aa11.36□□□□□ -0.59
SF3B3-206ENST00000565990 HSF1Q00613 529 aa11.36□□□□□ -0.59
SF3B3-206ENST00000565990 PIN1Q13526 163 aaPredicted RBP11.36□□□□□ -0.59
SF3B3-206ENST00000565990 ZIK1Q3SY52 487 aaPredicted RBP11.36□□□□□ -0.59
SF3B3-206ENST00000565990 FGD3Q5JSP0 725 aa11.36□□□□□ -0.59
SF3B3-206ENST00000565990 RAET1LQ5VY80 246 aa11.36□□□□□ -0.59
SF3B3-206ENST00000565990 FAHD1Q6P587 224 aa11.36□□□□□ -0.59
SF3B3-206ENST00000565990 GGNQ86UU5 652 aa11.36□□□□□ -0.59
SF3B3-206ENST00000565990 CADM2Q8N3J6 435 aa11.36□□□□□ -0.59
SF3B3-206ENST00000565990 PSD2Q9BQI7 771 aa11.36□□□□□ -0.59
SF3B3-206ENST00000565990 PRSS27Q9BQR3 290 aa11.36□□□□□ -0.59
SF3B3-206ENST00000565990 ZNF426Q9BUY5 554 aa11.36□□□□□ -0.59
SF3B3-206ENST00000565990 POTEKPQ9BYX7 375 aa11.36□□□□□ -0.59
SF3B3-206ENST00000565990 PRDM14Q9GZV8 571 aa11.36□□□□□ -0.59
SF3B3-206ENST00000565990 SMURF2Q9HAU4 748 aa11.36□□□□□ -0.59
SF3B3-206ENST00000565990 PLCXD1Q9NUJ7 323 aa11.36□□□□□ -0.59
SF3B3-206ENST00000565990 NDRG4Q9ULP0 352 aaKnown RBP11.36□□□□□ -0.59
SF3B3-206ENST00000565990 TMED7Q9Y3B3 224 aa11.36□□□□□ -0.59
SF3B3-206ENST00000565990 A3GALT2U3KPV4 340 aa11.36□□□□□ -0.59
SF3B3-206ENST00000565990 V9GYQ6 96 aa11.36□□□□□ -0.59
SF3B3-206ENST00000565990 AHRRA9YTQ3 701 aa11.35□□□□□ -0.59
SF3B3-206ENST00000565990 KPNA4O00629 521 aaPredicted RBP11.35□□□□□ -0.59
SF3B3-206ENST00000565990 NPIPB7O75200 414 aa11.35□□□□□ -0.59
SF3B3-206ENST00000565990 MT-ND1P03886 318 aa11.35□□□□□ -0.59
SF3B3-206ENST00000565990 ITGA2P17301 1181 aa11.35□□□□□ -0.59
SF3B3-206ENST00000565990 RHCEP18577 417 aa11.35□□□□□ -0.59
SF3B3-206ENST00000565990 PTGS2P35354 604 aa11.35□□□□□ -0.59
SF3B3-206ENST00000565990 POLR2IP36954 125 aaKnown RBP11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms