RNA–Protein interactions for RNA: ENST00000564068.1

COMMD4-209, Transcript of COMM domain containing 4, humanhuman

Gene COMMD4, Length 4,204 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-209ENST00000564068 FAM111BQ6SJ93 734 aa11.69□□□□□ -0.54
COMMD4-209ENST00000564068 TRAF4Q9BUZ4 470 aaPredicted RBP11.69□□□□□ -0.54
COMMD4-209ENST00000564068 TAPBPLQ9BX59 468 aa11.69□□□□□ -0.54
COMMD4-209ENST00000564068 POMT2Q9UKY4 750 aa11.69□□□□□ -0.54
COMMD4-209ENST00000564068 SSC5DA1L4H1 1573 aa11.69□□□□□ -0.54
COMMD4-209ENST00000564068 GAPDHSO14556 408 aaPredicted RBP11.69□□□□□ -0.54
COMMD4-209ENST00000564068 HYAL3O43820 417 aaPredicted RBP11.69□□□□□ -0.54
COMMD4-209ENST00000564068 GPRIN2O60269 458 aa11.69□□□□□ -0.54
COMMD4-209ENST00000564068 LDOC1O95751 146 aaPredicted RBP11.69□□□□□ -0.54
COMMD4-209ENST00000564068 GIPP09681 153 aaPredicted RBP11.69□□□□□ -0.54
COMMD4-209ENST00000564068 IFNGR1P15260 489 aa11.69□□□□□ -0.54
COMMD4-209ENST00000564068 NDUFS1P28331 727 aa11.69□□□□□ -0.54
COMMD4-209ENST00000564068 LSM11P83369 360 aaKnown RBP eCLIP11.69□□□□□ -0.54
COMMD4-209ENST00000564068 RAB33AQ14088 237 aa11.69□□□□□ -0.54
COMMD4-209ENST00000564068 PEA15Q15121 130 aa11.69□□□□□ -0.54
COMMD4-209ENST00000564068 RAB11FIP2Q7L804 512 aa11.69□□□□□ -0.54
COMMD4-209ENST00000564068 KLHDC8BQ8IXV7 354 aa11.69□□□□□ -0.54
COMMD4-209ENST00000564068 CDRT4Q8N9R6 151 aa11.69□□□□□ -0.54
COMMD4-209ENST00000564068 CASD1Q96PB1 797 aa11.69□□□□□ -0.54
COMMD4-209ENST00000564068 PFDN5Q99471 154 aa11.69□□□□□ -0.54
COMMD4-209ENST00000564068 NKX6-2Q9C056 277 aaPredicted RBP11.69□□□□□ -0.54
COMMD4-209ENST00000564068 NXF2Q9GZY0 626 aaKnown RBP11.69□□□□□ -0.54
COMMD4-209ENST00000564068 HS3ST2Q9Y278 367 aa11.69□□□□□ -0.54
COMMD4-209ENST00000564068 ANKRD31Q8N7Z5 1873 aa11.69□□□□□ -0.54
COMMD4-209ENST00000564068 FOCADQ5VW36 1801 aa11.69□□□□□ -0.54
COMMD4-209ENST00000564068 SEC16AO15027 2179 aa11.69□□□□□ -0.54
COMMD4-209ENST00000564068 ARRDC5A6NEK1 342 aa11.69□□□□□ -0.54
COMMD4-209ENST00000564068 TGM5O43548 720 aa11.69□□□□□ -0.54
COMMD4-209ENST00000564068 DPM1O60762 260 aa11.69□□□□□ -0.54
COMMD4-209ENST00000564068 F11P03951 625 aa11.69□□□□□ -0.54
COMMD4-209ENST00000564068 TPT1P13693 172 aaKnown RBP11.69□□□□□ -0.54
COMMD4-209ENST00000564068 SLC6A9P48067 706 aa11.69□□□□□ -0.54
COMMD4-209ENST00000564068 SOX9P48436 509 aa11.69□□□□□ -0.54
COMMD4-209ENST00000564068 RAE1P78406 368 aaKnown RBP11.69□□□□□ -0.54
COMMD4-209ENST00000564068 H3F3CQ6NXT2 135 aa11.69□□□□□ -0.54
COMMD4-209ENST00000564068 ZNF529Q6P280 563 aa11.69□□□□□ -0.54
COMMD4-209ENST00000564068 MS4A7Q9GZW8 240 aaPredicted RBP11.69□□□□□ -0.54
COMMD4-209ENST00000564068 ISYNA1Q9NPH2 558 aa11.69□□□□□ -0.54
COMMD4-209ENST00000564068 DNMT3BQ9UBC3 853 aaKnown RBP11.69□□□□□ -0.54
COMMD4-209ENST00000564068 A4GNTQ9UNA3 340 aa11.69□□□□□ -0.54
COMMD4-209ENST00000564068 C14orf166Q9Y224 244 aaKnown RBP11.69□□□□□ -0.54
COMMD4-209ENST00000564068 A0A0D9SG52 128 aa11.68□□□□□ -0.54
COMMD4-209ENST00000564068 KNG1P01042 644 aa11.68□□□□□ -0.54
COMMD4-209ENST00000564068 F13BP05160 661 aa11.68□□□□□ -0.54
COMMD4-209ENST00000564068 OR2T7P0C7T2 308 aa11.68□□□□□ -0.54
COMMD4-209ENST00000564068 HMGA1P17096 107 aaKnown RBP11.68□□□□□ -0.54
COMMD4-209ENST00000564068 DHCR24Q15392 516 aa11.68□□□□□ -0.54
COMMD4-209ENST00000564068 HTR3DQ70Z44 454 aa11.68□□□□□ -0.54
COMMD4-209ENST00000564068 DPPA4Q7L190 304 aa11.68□□□□□ -0.54
COMMD4-209ENST00000564068 OR2T27Q8NH04 317 aa11.68□□□□□ -0.54
COMMD4-209ENST00000564068 THRSPQ92748 146 aa11.68□□□□□ -0.54
COMMD4-209ENST00000564068 SAMD11Q96NU1 681 aa11.68□□□□□ -0.54
COMMD4-209ENST00000564068 ORAI3Q9BRQ5 295 aa11.68□□□□□ -0.54
COMMD4-209ENST00000564068 NIT2Q9NQR4 276 aa11.68□□□□□ -0.54
COMMD4-209ENST00000564068 MARCH5Q9NX47 278 aa11.68□□□□□ -0.54
COMMD4-209ENST00000564068 KCNE1BA0A087WTH5 132 aa11.68□□□□□ -0.54
COMMD4-209ENST00000564068 SLC5A10A0PJK1 596 aa11.68□□□□□ -0.54
COMMD4-209ENST00000564068 GPR89AB7ZAQ6 455 aa11.68□□□□□ -0.54
COMMD4-209ENST00000564068 H7C1C5 153 aa11.68□□□□□ -0.54
COMMD4-209ENST00000564068 SYT5O00445 386 aa11.68□□□□□ -0.54
COMMD4-209ENST00000564068 TSPAN15O95858 294 aa11.68□□□□□ -0.54
COMMD4-209ENST00000564068 GPR89BP0CG08 455 aa11.68□□□□□ -0.54
COMMD4-209ENST00000564068 CLUP10909 449 aa11.68□□□□□ -0.54
COMMD4-209ENST00000564068 HSD11B1P28845 292 aa11.68□□□□□ -0.54
COMMD4-209ENST00000564068 SLC6A1P30531 599 aa11.68□□□□□ -0.54
COMMD4-209ENST00000564068 LCN6P62502 163 aa11.68□□□□□ -0.54
COMMD4-209ENST00000564068 FBXL6Q8N531 539 aa11.68□□□□□ -0.54
COMMD4-209ENST00000564068 SIRT6Q8N6T7 355 aa11.68□□□□□ -0.54
COMMD4-209ENST00000564068 OR2AJ1Q8NGZ0 328 aa11.68□□□□□ -0.54
COMMD4-209ENST00000564068 TCTEX1D2Q8WW35 142 aa11.68□□□□□ -0.54
COMMD4-209ENST00000564068 HERVK_113Q902F9 699 aa11.68□□□□□ -0.54
COMMD4-209ENST00000564068 C3orf49Q96BT1 292 aa11.68□□□□□ -0.54
COMMD4-209ENST00000564068 SMIM3Q9BZL3 60 aa11.68□□□□□ -0.54
COMMD4-209ENST00000564068 DLL4Q9NR61 685 aa11.68□□□□□ -0.54
COMMD4-209ENST00000564068 ZNF701Q9NV72 531 aaPredicted RBP11.68□□□□□ -0.54
COMMD4-209ENST00000564068 HRASLS2Q9NWW9 162 aa11.68□□□□□ -0.54
COMMD4-209ENST00000564068 CCDC88CQ9P219 2028 aa11.68□□□□□ -0.54
COMMD4-209ENST00000564068 SPTBP11277 2137 aa11.68□□□□□ -0.54
COMMD4-209ENST00000564068 H3BNC9 293 aa11.68□□□□□ -0.54
COMMD4-209ENST00000564068 GABARAPH6UMI1 98 aa11.68□□□□□ -0.54
COMMD4-209ENST00000564068 DOK2O60496 412 aa11.68□□□□□ -0.54
COMMD4-209ENST00000564068 PRAMEF4O60810 478 aa11.68□□□□□ -0.54
COMMD4-209ENST00000564068 WNT1P04628 370 aa11.68□□□□□ -0.54
COMMD4-209ENST00000564068 RAB6AP20340 208 aa11.68□□□□□ -0.54
COMMD4-209ENST00000564068 ATP5A1P25705 553 aaKnown RBP11.68□□□□□ -0.54
COMMD4-209ENST00000564068 RIDAP52758 137 aaKnown RBP11.68□□□□□ -0.54
COMMD4-209ENST00000564068 SPOCK1Q08629 439 aa11.68□□□□□ -0.54
COMMD4-209ENST00000564068 TNK1Q13470 666 aa11.68□□□□□ -0.54
COMMD4-209ENST00000564068 ALG10Q5BKT4 473 aa11.68□□□□□ -0.54
COMMD4-209ENST00000564068 PRAMEF9Q5VWM5 478 aa11.68□□□□□ -0.54
COMMD4-209ENST00000564068 TECPR1Q7Z6L1 1165 aa11.68□□□□□ -0.54
COMMD4-209ENST00000564068 OR13C3Q8NGS6 347 aa11.68□□□□□ -0.54
COMMD4-209ENST00000564068 FOXRED1Q96CU9 486 aaPredicted RBP11.68□□□□□ -0.54
COMMD4-209ENST00000564068 LINC00052Q96N35 136 aa11.68□□□□□ -0.54
COMMD4-209ENST00000564068 SLC38A3Q99624 504 aa11.68□□□□□ -0.54
COMMD4-209ENST00000564068 ZNF649Q9BS31 505 aa11.68□□□□□ -0.54
COMMD4-209ENST00000564068 CRB3Q9BUF7 120 aa11.68□□□□□ -0.54
COMMD4-209ENST00000564068 BTBD2Q9BX70 525 aa11.68□□□□□ -0.54
COMMD4-209ENST00000564068 TM7SF3Q9NS93 570 aa11.68□□□□□ -0.54
COMMD4-209ENST00000564068 TAF1LQ8IZX4 1826 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms