RNA–Protein interactions for RNA: ENST00000563909.5

RNF40-205, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-205ENST00000563909 VDAC3Q9Y277 283 aa13.97□□□□□ -0.17
RNF40-205ENST00000563909 FKBP7Q9Y680 259 aa13.97□□□□□ -0.17
RNF40-205ENST00000563909 TMEM247A6NEH6 219 aa13.96□□□□□ -0.17
RNF40-205ENST00000563909 TRIM77I1YAP6 450 aa13.96□□□□□ -0.17
RNF40-205ENST00000563909 AIM2O14862 343 aa13.96□□□□□ -0.17
RNF40-205ENST00000563909 STX11O75558 287 aa13.96□□□□□ -0.17
RNF40-205ENST00000563909 UTS2O95399 124 aa13.96□□□□□ -0.17
RNF40-205ENST00000563909 ANGPTL1O95841 491 aa13.96□□□□□ -0.17
RNF40-205ENST00000563909 GUSBP08236 651 aa13.96□□□□□ -0.17
RNF40-205ENST00000563909 PABPC4LP0CB38 370 aaKnown RBP13.96□□□□□ -0.17
RNF40-205ENST00000563909 ETFAP13804 333 aa13.96□□□□□ -0.17
RNF40-205ENST00000563909 GPX2P18283 190 aa13.96□□□□□ -0.17
RNF40-205ENST00000563909 DSTNP60981 165 aa13.96□□□□□ -0.17
RNF40-205ENST00000563909 C17orf67Q0P5P2 114 aa13.96□□□□□ -0.17
RNF40-205ENST00000563909 KRT72Q14CN4 511 aa13.96□□□□□ -0.17
RNF40-205ENST00000563909 CCNJQ5T5M9 372 aa13.96□□□□□ -0.17
RNF40-205ENST00000563909 HBMQ6B0K9 141 aa13.96□□□□□ -0.17
RNF40-205ENST00000563909 ZNF544Q6NX49 715 aa13.96□□□□□ -0.17
RNF40-205ENST00000563909 FITM2Q8N6M3 262 aa13.96□□□□□ -0.17
RNF40-205ENST00000563909 LRRC17Q8N6Y2 441 aa13.96□□□□□ -0.17
RNF40-205ENST00000563909 LINC01356Q8N9X3 169 aa13.96□□□□□ -0.17
RNF40-205ENST00000563909 OSTF1Q92882 214 aa13.96□□□□□ -0.17
RNF40-205ENST00000563909 ROPN1LQ96C74 230 aa13.96□□□□□ -0.17
RNF40-205ENST00000563909 THUMPD3Q9BV44 507 aaKnown RBP13.96□□□□□ -0.17
RNF40-205ENST00000563909 TBL1XR1Q9BZK7 514 aa13.96□□□□□ -0.17
RNF40-205ENST00000563909 KLHL13Q9P2N7 655 aa13.96□□□□□ -0.17
RNF40-205ENST00000563909 P2RX2Q9UBL9 471 aa13.96□□□□□ -0.17
RNF40-205ENST00000563909 TAGLN3Q9UI15 199 aa13.96□□□□□ -0.17
RNF40-205ENST00000563909 PCNX3Q9H6A9 2034 aa13.96□□□□□ -0.17
RNF40-205ENST00000563909 IGLV3-32A0A0A0MS00 114 aa13.95□□□□□ -0.18
RNF40-205ENST00000563909 A0A0J9YW62 118 aa13.95□□□□□ -0.18
RNF40-205ENST00000563909 NGFRP08138 427 aa13.95□□□□□ -0.18
RNF40-205ENST00000563909 NR2F1P10589 423 aa13.95□□□□□ -0.18
RNF40-205ENST00000563909 BMP2P12643 396 aa13.95□□□□□ -0.18
RNF40-205ENST00000563909 HPGDP15428 266 aa13.95□□□□□ -0.18
RNF40-205ENST00000563909 ZNF83P51522 516 aa13.95□□□□□ -0.18
RNF40-205ENST00000563909 HPCAP84074 193 aa13.95□□□□□ -0.18
RNF40-205ENST00000563909 GNA13Q14344 377 aa13.95□□□□□ -0.18
RNF40-205ENST00000563909 GPAT3Q53EU6 434 aa13.95□□□□□ -0.18
RNF40-205ENST00000563909 TIMM23BQ5SRD1 257 aa13.95□□□□□ -0.18
RNF40-205ENST00000563909 NANOGP8Q6NSW7 305 aa13.95□□□□□ -0.18
RNF40-205ENST00000563909 SHISA2Q6UWI4 295 aa13.95□□□□□ -0.18
RNF40-205ENST00000563909 HACD2Q6Y1H2 254 aa13.95□□□□□ -0.18
RNF40-205ENST00000563909 Q6ZT83 130 aa13.95□□□□□ -0.18
RNF40-205ENST00000563909 ESPNLQ6ZVH7 1005 aa13.95□□□□□ -0.18
RNF40-205ENST00000563909 SSX8Q7RTT4 187 aa13.95□□□□□ -0.18
RNF40-205ENST00000563909 ZNF540Q8NDQ6 660 aa13.95□□□□□ -0.18
RNF40-205ENST00000563909 OR8J3Q8NGG0 315 aa13.95□□□□□ -0.18
RNF40-205ENST00000563909 REXO5Q96IC2 774 aaKnown RBP13.95□□□□□ -0.18
RNF40-205ENST00000563909 TRNT1Q96Q11 434 aaKnown RBP13.95□□□□□ -0.18
RNF40-205ENST00000563909 ZNF747Q9BV97 191 aa13.95□□□□□ -0.18
RNF40-205ENST00000563909 RBM4Q9BWF3 364 aaKnown RBP13.95□□□□□ -0.18
RNF40-205ENST00000563909 BPESC1Q9GZL8 116 aa13.95□□□□□ -0.18
RNF40-205ENST00000563909 TMEM185BQ9H7F4 350 aa13.95□□□□□ -0.18
RNF40-205ENST00000563909 NANOGQ9H9S0 305 aa13.95□□□□□ -0.18
RNF40-205ENST00000563909 UBQLN4Q9NRR5 601 aa13.95□□□□□ -0.18
RNF40-205ENST00000563909 CALML5Q9NZT1 146 aa13.95□□□□□ -0.18
RNF40-205ENST00000563909 ZNF17P17021 662 aa13.94□□□□□ -0.18
RNF40-205ENST00000563909 GGT1P19440 569 aa13.94□□□□□ -0.18
RNF40-205ENST00000563909 PTAFRP25105 342 aa13.94□□□□□ -0.18
RNF40-205ENST00000563909 CD40P25942 277 aa13.94□□□□□ -0.18
RNF40-205ENST00000563909 IL2RGP31785 369 aa13.94□□□□□ -0.18
RNF40-205ENST00000563909 MNAT1P51948 309 aa13.94□□□□□ -0.18
RNF40-205ENST00000563909 ATP12AP54707 1039 aa13.94□□□□□ -0.18
RNF40-205ENST00000563909 CARD18P57730 90 aa13.94□□□□□ -0.18
RNF40-205ENST00000563909 RNPS1Q15287 305 aaKnown RBP13.94□□□□□ -0.18
RNF40-205ENST00000563909 SYPL1Q16563 259 aa13.94□□□□□ -0.18
RNF40-205ENST00000563909 GRAMD1BQ3KR37 738 aa13.94□□□□□ -0.18
RNF40-205ENST00000563909 AP1ARQ63HQ0 302 aa13.94□□□□□ -0.18
RNF40-205ENST00000563909 APOOLQ6UXV4 268 aa13.94□□□□□ -0.18
RNF40-205ENST00000563909 LRRC74BQ6ZQY2 392 aa13.94□□□□□ -0.18
RNF40-205ENST00000563909 ARPINQ7Z6K5 226 aa13.94□□□□□ -0.18
RNF40-205ENST00000563909 P2RY8Q86VZ1 359 aa13.94□□□□□ -0.18
RNF40-205ENST00000563909 ZNF527Q8NB42 609 aa13.94□□□□□ -0.18
RNF40-205ENST00000563909 RNF128Q8TEB7 428 aa13.94□□□□□ -0.18
RNF40-205ENST00000563909 SORCS2Q96PQ0 1159 aa13.94□□□□□ -0.18
RNF40-205ENST00000563909 HOPXQ9BPY8 73 aaPredicted RBP13.94□□□□□ -0.18
RNF40-205ENST00000563909 ZNF350Q9GZX5 532 aa13.94□□□□□ -0.18
RNF40-205ENST00000563909 HHATLQ9HCP6 504 aa13.94□□□□□ -0.18
RNF40-205ENST00000563909 ARL8BQ9NVJ2 186 aa13.94□□□□□ -0.18
RNF40-205ENST00000563909 PCDHB10Q9UN67 800 aa13.94□□□□□ -0.18
RNF40-205ENST00000563909 AP3M1Q9Y2T2 418 aa13.94□□□□□ -0.18
RNF40-205ENST00000563909 WDR45Q9Y484 360 aa13.94□□□□□ -0.18
RNF40-205ENST00000563909 A0A087WZY1 265 aa13.93□□□□□ -0.18
RNF40-205ENST00000563909 NPIPA5A0A0B4J1W7 369 aa13.93□□□□□ -0.18
RNF40-205ENST00000563909 PRAMEF27A3QJZ7 478 aa13.93□□□□□ -0.18
RNF40-205ENST00000563909 NPIPA7E9PJI5 369 aa13.93□□□□□ -0.18
RNF40-205ENST00000563909 FXYD1O00168 92 aa13.93□□□□□ -0.18
RNF40-205ENST00000563909 SCDO00767 359 aa13.93□□□□□ -0.18
RNF40-205ENST00000563909 OXSR1O95747 527 aaPredicted RBP13.93□□□□□ -0.18
RNF40-205ENST00000563909 YES1P07947 543 aa13.93□□□□□ -0.18
RNF40-205ENST00000563909 TFPTP0C1Z6 253 aa13.93□□□□□ -0.18
RNF40-205ENST00000563909 NPIPA8P0DM63 369 aa13.93□□□□□ -0.18
RNF40-205ENST00000563909 APEX1P27695 318 aaKnown RBP13.93□□□□□ -0.18
RNF40-205ENST00000563909 NUDT2P50583 147 aa13.93□□□□□ -0.18
RNF40-205ENST00000563909 CRISP3P54108 245 aa13.93□□□□□ -0.18
RNF40-205ENST00000563909 MTPNP58546 118 aa13.93□□□□□ -0.18
RNF40-205ENST00000563909 RAC1P63000 192 aa13.93□□□□□ -0.18
RNF40-205ENST00000563909 FUT5Q11128 374 aa13.93□□□□□ -0.18
RNF40-205ENST00000563909 SCGB2A2Q13296 93 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms