RNA–Protein interactions for RNA: ENST00000563366.5

UBFD1-202, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 709 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-202ENST00000563366 RACGAP1Q9H0H5 632 aa8.81□□□□□ -1
UBFD1-202ENST00000563366 UBQLN3Q9H347 655 aa8.81□□□□□ -1
UBFD1-202ENST00000563366 FKRPQ9H9S5 495 aa8.81□□□□□ -1
UBFD1-202ENST00000563366 NANSQ9NR45 359 aa8.81□□□□□ -1
UBFD1-202ENST00000563366 CMC2Q9NRP2 79 aa8.81□□□□□ -1
UBFD1-202ENST00000563366 FKBP14Q9NWM8 211 aa8.81□□□□□ -1
UBFD1-202ENST00000563366 H2AFY2Q9P0M6 372 aaPredicted RBP8.81□□□□□ -1
UBFD1-202ENST00000563366 ZNF229Q9UJW7 825 aa8.81□□□□□ -1
UBFD1-202ENST00000563366 CPAMD8Q8IZJ3 1885 aa8.81□□□□□ -1
UBFD1-202ENST00000563366 MPDZO75970 2070 aa8.81□□□□□ -1
UBFD1-202ENST00000563366 TRAV36DV7A0A075B6V5 113 aa8.8□□□□□ -1
UBFD1-202ENST00000563366 A0A087WZY1 265 aa8.8□□□□□ -1
UBFD1-202ENST00000563366 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.8□□□□□ -1
UBFD1-202ENST00000563366 TMED7-TICAM2A0A0A6YYA0 188 aa8.8□□□□□ -1
UBFD1-202ENST00000563366 FAM181BA6NEQ2 426 aa8.8□□□□□ -1
UBFD1-202ENST00000563366 CCDC160A6NGH7 325 aa8.8□□□□□ -1
UBFD1-202ENST00000563366 A8MVM7 634 aa8.8□□□□□ -1
UBFD1-202ENST00000563366 KDM4EB2RXH2 506 aaPredicted RBP8.8□□□□□ -1
UBFD1-202ENST00000563366 F8W735 103 aaPredicted RBP8.8□□□□□ -1
UBFD1-202ENST00000563366 ETV2O00321 342 aaPredicted RBP8.8□□□□□ -1
UBFD1-202ENST00000563366 BHLHE40O14503 412 aa8.8□□□□□ -1
UBFD1-202ENST00000563366 TMPRSS2O15393 492 aa8.8□□□□□ -1
UBFD1-202ENST00000563366 TLX2O43763 284 aaPredicted RBP8.8□□□□□ -1
UBFD1-202ENST00000563366 PRKYO43930 277 aa8.8□□□□□ -1
UBFD1-202ENST00000563366 ZNF354AO60765 605 aaPredicted RBP8.8□□□□□ -1
UBFD1-202ENST00000563366 PTP4A3O75365 173 aa8.8□□□□□ -1
UBFD1-202ENST00000563366 SNX4O95219 450 aa8.8□□□□□ -1
UBFD1-202ENST00000563366 CDK1P06493 297 aa8.8□□□□□ -1
UBFD1-202ENST00000563366 LIPCP11150 499 aa8.8□□□□□ -1
UBFD1-202ENST00000563366 PEPDP12955 493 aa8.8□□□□□ -1
UBFD1-202ENST00000563366 APEHP13798 732 aaKnown RBP8.8□□□□□ -1
UBFD1-202ENST00000563366 ZNF3P17036 446 aa8.8□□□□□ -1
UBFD1-202ENST00000563366 PRKCAP17252 672 aa8.8□□□□□ -1
UBFD1-202ENST00000563366 HK1P19367 917 aa8.8□□□□□ -1
UBFD1-202ENST00000563366 FUT1P19526 365 aa8.8□□□□□ -1
UBFD1-202ENST00000563366 MST1P26927 711 aa8.8□□□□□ -1
UBFD1-202ENST00000563366 CASRP41180 1078 aa8.8□□□□□ -1
UBFD1-202ENST00000563366 EIF1P41567 113 aaKnown RBP8.8□□□□□ -1
UBFD1-202ENST00000563366 CASP3P42574 277 aa8.8□□□□□ -1
UBFD1-202ENST00000563366 NOVA1P51513 510 aaKnown RBP8.8□□□□□ -1
UBFD1-202ENST00000563366 GAS1P54826 345 aa8.8□□□□□ -1
UBFD1-202ENST00000563366 RRADP55042 308 aa8.8□□□□□ -1
UBFD1-202ENST00000563366 RPS4XP62701 263 aaKnown RBP8.8□□□□□ -1
UBFD1-202ENST00000563366 EFNB1P98172 346 aa8.8□□□□□ -1
UBFD1-202ENST00000563366 RAB40BQ12829 278 aa8.8□□□□□ -1
UBFD1-202ENST00000563366 AIMP2Q13155 320 aaKnown RBP8.8□□□□□ -1
UBFD1-202ENST00000563366 TMED1Q13445 227 aa8.8□□□□□ -1
UBFD1-202ENST00000563366 NEDD8Q15843 81 aa8.8□□□□□ -1
UBFD1-202ENST00000563366 ZNF74Q16587 644 aa8.8□□□□□ -1
UBFD1-202ENST00000563366 SMN1Q16637 294 aaKnown RBP8.8□□□□□ -1
UBFD1-202ENST00000563366 SYT14P1Q58G82 188 aa8.8□□□□□ -1
UBFD1-202ENST00000563366 SLC25A53Q5H9E4 307 aa8.8□□□□□ -1
UBFD1-202ENST00000563366 CLEC12AQ5QGZ9 265 aa8.8□□□□□ -1
UBFD1-202ENST00000563366 FAM69AQ5T7M9 428 aa8.8□□□□□ -1
UBFD1-202ENST00000563366 NXNL2Q5VZ03 156 aa8.8□□□□□ -1
UBFD1-202ENST00000563366 SLC22A10Q63ZE4 541 aa8.8□□□□□ -1
UBFD1-202ENST00000563366 ACSM5Q6NUN0 579 aa8.8□□□□□ -1
UBFD1-202ENST00000563366 DPY19L2P2Q6ZN68 376 aa8.8□□□□□ -1
UBFD1-202ENST00000563366 C16orf47Q6ZP98 133 aaPredicted RBP8.8□□□□□ -1
UBFD1-202ENST00000563366 MAMDC2Q7Z304 686 aaPredicted RBP8.8□□□□□ -1
UBFD1-202ENST00000563366 NANOGNBQ7Z5D8 188 aa8.8□□□□□ -1
UBFD1-202ENST00000563366 IQCF1Q8N6M8 205 aa8.8□□□□□ -1
UBFD1-202ENST00000563366 C10orf53Q8N6V4 93 aa8.8□□□□□ -1
UBFD1-202ENST00000563366 CLEC1AQ8NC01 280 aa8.8□□□□□ -1
UBFD1-202ENST00000563366 OR10G3Q8NGC4 313 aa8.8□□□□□ -1
UBFD1-202ENST00000563366 PAQR8Q8TEZ7 354 aa8.8□□□□□ -1
UBFD1-202ENST00000563366 SLC25A43Q8WUT9 341 aaPredicted RBP8.8□□□□□ -1
UBFD1-202ENST00000563366 UBE2FQ969M7 185 aa8.8□□□□□ -1
UBFD1-202ENST00000563366 DDIT4LQ96D03 193 aa8.8□□□□□ -1
UBFD1-202ENST00000563366 SIGLEC11Q96RL6 698 aa8.8□□□□□ -1
UBFD1-202ENST00000563366 GPX7Q96SL4 187 aaPredicted RBP8.8□□□□□ -1
UBFD1-202ENST00000563366 CDCP1Q9H5V8 836 aa8.8□□□□□ -1
UBFD1-202ENST00000563366 GPN2Q9H9Y4 310 aaPredicted RBP8.8□□□□□ -1
UBFD1-202ENST00000563366 SERINC1Q9NRX5 453 aa8.8□□□□□ -1
UBFD1-202ENST00000563366 PAK1IP1Q9NWT1 392 aaPredicted RBP8.8□□□□□ -1
UBFD1-202ENST00000563366 KLHL21Q9UJP4 597 aa8.8□□□□□ -1
UBFD1-202ENST00000563366 OSGIN1Q9UJX0 560 aa8.8□□□□□ -1
UBFD1-202ENST00000563366 HIF3AQ9Y2N7 669 aa8.8□□□□□ -1
UBFD1-202ENST00000563366 POLR3KQ9Y2Y1 108 aaPredicted RBP8.8□□□□□ -1
UBFD1-202ENST00000563366 TMED7Q9Y3B3 224 aa8.8□□□□□ -1
UBFD1-202ENST00000563366 CHCHD2Q9Y6H1 151 aaPredicted RBP8.8□□□□□ -1
UBFD1-202ENST00000563366 IGKV1D-42A0A075B6H8 117 aa8.79□□□□□ -1
UBFD1-202ENST00000563366 LOC101059948A0A1B0GTJ6 334 aa8.79□□□□□ -1
UBFD1-202ENST00000563366 SLC22A31A6NKX4 558 aa8.79□□□□□ -1
UBFD1-202ENST00000563366 ZNF99A8MXY4 864 aaPredicted RBP8.79□□□□□ -1
UBFD1-202ENST00000563366 ARPC3O15145 178 aa8.79□□□□□ -1
UBFD1-202ENST00000563366 ZNF208O43345 1280 aa8.79□□□□□ -1
UBFD1-202ENST00000563366 SUSD5O60279 629 aa8.79□□□□□ -1
UBFD1-202ENST00000563366 ENTPD6O75354 484 aa8.79□□□□□ -1
UBFD1-202ENST00000563366 AHSA1O95433 338 aa8.79□□□□□ -1
UBFD1-202ENST00000563366 CH25HO95992 272 aa8.79□□□□□ -1
UBFD1-202ENST00000563366 P04436 131 aa8.79□□□□□ -1
UBFD1-202ENST00000563366 IGFBP1P08833 259 aaPredicted RBP8.79□□□□□ -1
UBFD1-202ENST00000563366 HTR1AP08908 422 aa8.79□□□□□ -1
UBFD1-202ENST00000563366 DBTP11182 482 aaKnown RBP8.79□□□□□ -1
UBFD1-202ENST00000563366 COL8A1P27658 744 aa8.79□□□□□ -1
UBFD1-202ENST00000563366 RPL4P36578 427 aaKnown RBP8.79□□□□□ -1
UBFD1-202ENST00000563366 SLC15A1P46059 708 aa8.79□□□□□ -1
UBFD1-202ENST00000563366 NUDT6P53370 316 aa8.79□□□□□ -1
UBFD1-202ENST00000563366 CDH11P55287 796 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms