RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 ARPC5O15511 151 aa12.87□□□□□ -0.35
RABGGTA-220ENST00000560998 RAD1O60671 282 aa12.87□□□□□ -0.35
RABGGTA-220ENST00000560998 CDC123O75794 336 aaPredicted RBP12.87□□□□□ -0.35
RABGGTA-220ENST00000560998 SERPINA3P01011 423 aa12.87□□□□□ -0.35
RABGGTA-220ENST00000560998 CHRM4P08173 479 aa12.87□□□□□ -0.35
RABGGTA-220ENST00000560998 ALPPL2P10696 532 aa12.87□□□□□ -0.35
RABGGTA-220ENST00000560998 RPA2P15927 270 aa12.87□□□□□ -0.35
RABGGTA-220ENST00000560998 ANXA11P50995 505 aaKnown RBP12.87□□□□□ -0.35
RABGGTA-220ENST00000560998 GPR143P51810 404 aa12.87□□□□□ -0.35
RABGGTA-220ENST00000560998 PRKAG1P54619 331 aa12.87□□□□□ -0.35
RABGGTA-220ENST00000560998 FUT5Q11128 374 aa12.87□□□□□ -0.35
RABGGTA-220ENST00000560998 OLIG3Q7RTU3 272 aa12.87□□□□□ -0.35
RABGGTA-220ENST00000560998 RD3Q7Z3Z2 195 aa12.87□□□□□ -0.35
RABGGTA-220ENST00000560998 PXKQ7Z7A4 578 aa12.87□□□□□ -0.35
RABGGTA-220ENST00000560998 CCDC116Q8IYX3 515 aa12.87□□□□□ -0.35
RABGGTA-220ENST00000560998 ARMC10Q8N2F6 343 aa12.87□□□□□ -0.35
RABGGTA-220ENST00000560998 SLC44A3Q8N4M1 653 aa12.87□□□□□ -0.35
RABGGTA-220ENST00000560998 C12orf45Q8N5I9 185 aaPredicted RBP12.87□□□□□ -0.35
RABGGTA-220ENST00000560998 CCL4L1Q8NHW4 92 aa12.87□□□□□ -0.35
RABGGTA-220ENST00000560998 SFT2D1Q8WV19 159 aa12.87□□□□□ -0.35
RABGGTA-220ENST00000560998 TSACCQ96A04 125 aaPredicted RBP12.87□□□□□ -0.35
RABGGTA-220ENST00000560998 MRGPRX1Q96LB2 322 aa12.87□□□□□ -0.35
RABGGTA-220ENST00000560998 BMFQ96LC9 184 aa12.87□□□□□ -0.35
RABGGTA-220ENST00000560998 PRRC1Q96M27 445 aa12.87□□□□□ -0.35
RABGGTA-220ENST00000560998 ZFP3Q96NJ6 502 aa12.87□□□□□ -0.35
RABGGTA-220ENST00000560998 MFRPQ9BY79 579 aa12.87□□□□□ -0.35
RABGGTA-220ENST00000560998 PLA2G12AQ9BZM1 189 aa12.87□□□□□ -0.35
RABGGTA-220ENST00000560998 NKIRAS2Q9NYR9 191 aa12.87□□□□□ -0.35
RABGGTA-220ENST00000560998 ZNF69Q9UC07 566 aa12.87□□□□□ -0.35
RABGGTA-220ENST00000560998 TINAGQ9UJW2 476 aa12.87□□□□□ -0.35
RABGGTA-220ENST00000560998 PCOLCE2Q9UKZ9 415 aa12.87□□□□□ -0.35
RABGGTA-220ENST00000560998 EDARQ9UNE0 448 aa12.87□□□□□ -0.35
RABGGTA-220ENST00000560998 GPR52Q9Y2T5 361 aa12.87□□□□□ -0.35
RABGGTA-220ENST00000560998 A0A1B0GTQ1 180 aa12.86□□□□□ -0.35
RABGGTA-220ENST00000560998 A0A1B0GVC2 190 aa12.86□□□□□ -0.35
RABGGTA-220ENST00000560998 A6NIN4 97 aa12.86□□□□□ -0.35
RABGGTA-220ENST00000560998 ARPC1BO15143 372 aaKnown RBP12.86□□□□□ -0.35
RABGGTA-220ENST00000560998 APBB3O95704 486 aa12.86□□□□□ -0.35
RABGGTA-220ENST00000560998 C8orf89P0DMQ9 161 aa12.86□□□□□ -0.35
RABGGTA-220ENST00000560998 CSNK2A2P19784 350 aaPredicted RBP12.86□□□□□ -0.35
RABGGTA-220ENST00000560998 MAT1AQ00266 395 aaKnown RBP12.86□□□□□ -0.35
RABGGTA-220ENST00000560998 TGM3Q08188 693 aa12.86□□□□□ -0.35
RABGGTA-220ENST00000560998 TSPAN31Q12999 210 aa12.86□□□□□ -0.35
RABGGTA-220ENST00000560998 LASP1Q14847 261 aaKnown RBP12.86□□□□□ -0.35
RABGGTA-220ENST00000560998 VN1R4Q7Z5H5 301 aa12.86□□□□□ -0.35
RABGGTA-220ENST00000560998 BPIFCQ8NFQ6 507 aa12.86□□□□□ -0.35
RABGGTA-220ENST00000560998 OR56A1Q8NGH5 318 aa12.86□□□□□ -0.35
RABGGTA-220ENST00000560998 SMAP2Q8WU79 429 aaPredicted RBP12.86□□□□□ -0.35
RABGGTA-220ENST00000560998 TCEAL3Q969E4 200 aa12.86□□□□□ -0.35
RABGGTA-220ENST00000560998 MOAP1Q96BY2 351 aa12.86□□□□□ -0.35
RABGGTA-220ENST00000560998 PIGMQ9H3S5 423 aa12.86□□□□□ -0.35
RABGGTA-220ENST00000560998 INPP5EQ9NRR6 644 aa12.86□□□□□ -0.35
RABGGTA-220ENST00000560998 RASL12Q9NYN1 266 aa12.86□□□□□ -0.35
RABGGTA-220ENST00000560998 NTMQ9P121 344 aa12.86□□□□□ -0.35
RABGGTA-220ENST00000560998 OPN4Q9UHM6 478 aa12.86□□□□□ -0.35
RABGGTA-220ENST00000560998 MRTO4Q9UKD2 239 aaKnown RBP12.86□□□□□ -0.35
RABGGTA-220ENST00000560998 TRAV1-2A0A0B4J238 106 aa12.85□□□□□ -0.35
RABGGTA-220ENST00000560998 A0A0G2JPF8 293 aa12.85□□□□□ -0.35
RABGGTA-220ENST00000560998 HNRNPCL3B7ZW38 293 aa12.85□□□□□ -0.35
RABGGTA-220ENST00000560998 J3QRE1 110 aa12.85□□□□□ -0.35
RABGGTA-220ENST00000560998 M0R3H8 397 aa12.85□□□□□ -0.35
RABGGTA-220ENST00000560998 SIX6O95475 246 aa12.85□□□□□ -0.35
RABGGTA-220ENST00000560998 HMGN2P05204 90 aaKnown RBP12.85□□□□□ -0.35
RABGGTA-220ENST00000560998 HNRNPCL4P0DMR1 293 aa12.85□□□□□ -0.35
RABGGTA-220ENST00000560998 NR0B1P51843 470 aaKnown RBP12.85□□□□□ -0.35
RABGGTA-220ENST00000560998 OR10A3P58181 314 aa12.85□□□□□ -0.35
RABGGTA-220ENST00000560998 RPS15AP62244 130 aaKnown RBP12.85□□□□□ -0.35
RABGGTA-220ENST00000560998 BTN3A2P78410 334 aa12.85□□□□□ -0.35
RABGGTA-220ENST00000560998 FZD5Q13467 585 aa12.85□□□□□ -0.35
RABGGTA-220ENST00000560998 MPPED2Q15777 294 aa12.85□□□□□ -0.35
RABGGTA-220ENST00000560998 DHRS7BQ6IAN0 325 aaPredicted RBP12.85□□□□□ -0.35
RABGGTA-220ENST00000560998 SLC25A25Q6KCM7 469 aa12.85□□□□□ -0.35
RABGGTA-220ENST00000560998 CORO6Q6QEF8 472 aa12.85□□□□□ -0.35
RABGGTA-220ENST00000560998 GID4Q8IVV7 300 aa12.85□□□□□ -0.35
RABGGTA-220ENST00000560998 SPAG16Q8N0X2 631 aa12.85□□□□□ -0.35
RABGGTA-220ENST00000560998 GJD3Q8N144 294 aa12.85□□□□□ -0.35
RABGGTA-220ENST00000560998 FLVCR1-AS1Q8TAF5 88 aa12.85□□□□□ -0.35
RABGGTA-220ENST00000560998 NT5CQ8TCD5 201 aa12.85□□□□□ -0.35
RABGGTA-220ENST00000560998 THEM6Q8WUY1 208 aa12.85□□□□□ -0.35
RABGGTA-220ENST00000560998 OSTF1Q92882 214 aa12.85□□□□□ -0.35
RABGGTA-220ENST00000560998 GAL3ST3Q96A11 431 aa12.85□□□□□ -0.35
RABGGTA-220ENST00000560998 C16orf58Q96GQ5 468 aa12.85□□□□□ -0.35
RABGGTA-220ENST00000560998 ZNF681Q96N22 645 aa12.85□□□□□ -0.35
RABGGTA-220ENST00000560998 DMRTA2Q96SC8 542 aa12.85□□□□□ -0.35
RABGGTA-220ENST00000560998 OR10A4Q9H209 315 aa12.85□□□□□ -0.35
RABGGTA-220ENST00000560998 SRMSQ9H3Y6 488 aa12.85□□□□□ -0.35
RABGGTA-220ENST00000560998 MAN2C1Q9NTJ4 1040 aa12.85□□□□□ -0.35
RABGGTA-220ENST00000560998 TAS2R3Q9NYW6 316 aa12.85□□□□□ -0.35
RABGGTA-220ENST00000560998 MYEF2Q9P2K5 600 aaKnown RBP12.85□□□□□ -0.35
RABGGTA-220ENST00000560998 ERVK-19Q9WJR5 959 aa12.85□□□□□ -0.35
RABGGTA-220ENST00000560998 PIAS3Q9Y6X2 628 aa12.85□□□□□ -0.35
RABGGTA-220ENST00000560998 TRBV23OR9-2A0A075B6M9 112 aa12.85□□□□□ -0.35
RABGGTA-220ENST00000560998 UBE2QL1A1L167 161 aa12.85□□□□□ -0.35
RABGGTA-220ENST00000560998 TRAPPC13A5PLN9 417 aa12.85□□□□□ -0.35
RABGGTA-220ENST00000560998 A6NCN8 305 aa12.85□□□□□ -0.35
RABGGTA-220ENST00000560998 GABARAPH6UMI1 98 aa12.85□□□□□ -0.35
RABGGTA-220ENST00000560998 SULT1C2O00338 296 aa12.85□□□□□ -0.35
RABGGTA-220ENST00000560998 SURF4O15260 269 aa12.85□□□□□ -0.35
RABGGTA-220ENST00000560998 EMC8O43402 210 aa12.85□□□□□ -0.35
RABGGTA-220ENST00000560998 PLPP2O43688 288 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms