RNA–Protein interactions for RNA: ENST00000560463.5

TRAF3-209, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-209ENST00000560463 GPX7Q96SL4 187 aaPredicted RBP7.78□□□□□ -1.16
TRAF3-209ENST00000560463 SMAD5Q99717 465 aaKnown RBP7.78□□□□□ -1.16
TRAF3-209ENST00000560463 IFT27Q9BW83 186 aa7.78□□□□□ -1.16
TRAF3-209ENST00000560463 ASPNQ9BXN1 380 aa7.78□□□□□ -1.16
TRAF3-209ENST00000560463 ADNPQ9H2P0 1102 aa7.78□□□□□ -1.16
TRAF3-209ENST00000560463 UBQLN3Q9H347 655 aa7.78□□□□□ -1.16
TRAF3-209ENST00000560463 FN3KQ9H479 309 aa7.78□□□□□ -1.16
TRAF3-209ENST00000560463 RASSF1Q9NS23 344 aa7.78□□□□□ -1.16
TRAF3-209ENST00000560463 DEPPQ9NTK1 212 aa7.78□□□□□ -1.16
TRAF3-209ENST00000560463 PLCXD1Q9NUJ7 323 aa7.78□□□□□ -1.16
TRAF3-209ENST00000560463 CLN6Q9NWW5 311 aa7.78□□□□□ -1.16
TRAF3-209ENST00000560463 QPCTLQ9NXS2 382 aa7.78□□□□□ -1.16
TRAF3-209ENST00000560463 TUBA8Q9NY65 449 aaPredicted RBP7.78□□□□□ -1.16
TRAF3-209ENST00000560463 SCN3BQ9NY72 215 aa7.78□□□□□ -1.16
TRAF3-209ENST00000560463 ZNF226Q9NYT6 803 aa7.78□□□□□ -1.16
TRAF3-209ENST00000560463 SLC6A5Q9Y345 797 aa7.78□□□□□ -1.16
TRAF3-209ENST00000560463 TPRKBQ9Y3C4 175 aa7.78□□□□□ -1.16
TRAF3-209ENST00000560463 HDGFL3Q9Y3E1 203 aa7.78□□□□□ -1.16
TRAF3-209ENST00000560463 PCDHGB7Q9Y5F8 929 aa7.78□□□□□ -1.16
TRAF3-209ENST00000560463 PCDHGA9Q9Y5G4 932 aaKnown RBP7.78□□□□□ -1.16
TRAF3-209ENST00000560463 HRH3Q9Y5N1 445 aa7.78□□□□□ -1.16
TRAF3-209ENST00000560463 CORINQ9Y5Q5 1042 aa7.78□□□□□ -1.16
TRAF3-209ENST00000560463 NCOA6Q14686 2063 aaPredicted RBP7.78□□□□□ -1.16
TRAF3-209ENST00000560463 DOCK7Q96N67 2140 aa7.78□□□□□ -1.16
TRAF3-209ENST00000560463 DMXL2Q8TDJ6 3036 aa7.77□□□□□ -1.17
TRAF3-209ENST00000560463 ZC3H12DA2A288 527 aaKnown RBP7.77□□□□□ -1.17
TRAF3-209ENST00000560463 LRRC3CA6NJW4 275 aa7.77□□□□□ -1.17
TRAF3-209ENST00000560463 GJE1A6NN92 205 aa7.77□□□□□ -1.17
TRAF3-209ENST00000560463 FTCDNL1E5RQL4 147 aa7.77□□□□□ -1.17
TRAF3-209ENST00000560463 G3V3Y1 287 aa7.77□□□□□ -1.17
TRAF3-209ENST00000560463 M0R3G1 203 aa7.77□□□□□ -1.17
TRAF3-209ENST00000560463 SLC1A7O00341 560 aa7.77□□□□□ -1.17
TRAF3-209ENST00000560463 IMPA2O14732 288 aa7.77□□□□□ -1.17
TRAF3-209ENST00000560463 ARPC3O15145 178 aa7.77□□□□□ -1.17
TRAF3-209ENST00000560463 SURF4O15260 269 aa7.77□□□□□ -1.17
TRAF3-209ENST00000560463 MRPS14O60783 128 aaKnown RBP7.77□□□□□ -1.17
TRAF3-209ENST00000560463 WBP4O75554 376 aaKnown RBP7.77□□□□□ -1.17
TRAF3-209ENST00000560463 HPNP05981 417 aa7.77□□□□□ -1.17
TRAF3-209ENST00000560463 ADRB1P08588 477 aa7.77□□□□□ -1.17
TRAF3-209ENST00000560463 PEPDP12955 493 aa7.77□□□□□ -1.17
TRAF3-209ENST00000560463 APEHP13798 732 aaKnown RBP7.77□□□□□ -1.17
TRAF3-209ENST00000560463 CRHBPP24387 322 aa7.77□□□□□ -1.17
TRAF3-209ENST00000560463 GDF1P27539 372 aa7.77□□□□□ -1.17
TRAF3-209ENST00000560463 GTF2E2P29084 291 aaKnown RBP7.77□□□□□ -1.17
TRAF3-209ENST00000560463 UQCRC1P31930 480 aa7.77□□□□□ -1.17
TRAF3-209ENST00000560463 IDUAP35475 653 aa7.77□□□□□ -1.17
TRAF3-209ENST00000560463 PCYT1AP49585 367 aa7.77□□□□□ -1.17
TRAF3-209ENST00000560463 TNFSF10P50591 281 aa7.77□□□□□ -1.17
TRAF3-209ENST00000560463 UCNP55089 124 aa7.77□□□□□ -1.17
TRAF3-209ENST00000560463 RAC1P63000 192 aa7.77□□□□□ -1.17
TRAF3-209ENST00000560463 LTBQ06643 244 aa7.77□□□□□ -1.17
TRAF3-209ENST00000560463 FOXO1Q12778 655 aa7.77□□□□□ -1.17
TRAF3-209ENST00000560463 ZP4Q12836 540 aa7.77□□□□□ -1.17
TRAF3-209ENST00000560463 ZNF766Q5HY98 468 aa7.77□□□□□ -1.17
TRAF3-209ENST00000560463 TMEM201Q5SNT2 666 aa7.77□□□□□ -1.17
TRAF3-209ENST00000560463 ARHGAP11AQ6P4F7 1023 aa7.77□□□□□ -1.17
TRAF3-209ENST00000560463 IGFL3Q6UXB1 125 aa7.77□□□□□ -1.17
TRAF3-209ENST00000560463 LRRC69Q6ZNQ3 347 aa7.77□□□□□ -1.17
TRAF3-209ENST00000560463 NANOGNBQ7Z5D8 188 aa7.77□□□□□ -1.17
TRAF3-209ENST00000560463 ZGRF1Q86YA3 2104 aa7.77□□□□□ -1.17
TRAF3-209ENST00000560463 SULF2Q8IWU5 870 aa7.77□□□□□ -1.17
TRAF3-209ENST00000560463 SPACA3Q8IXA5 215 aa7.77□□□□□ -1.17
TRAF3-209ENST00000560463 LRRC17Q8N6Y2 441 aa7.77□□□□□ -1.17
TRAF3-209ENST00000560463 TCEANCQ8N8B7 351 aa7.77□□□□□ -1.17
TRAF3-209ENST00000560463 FAM98AQ8NCA5 519 aaKnown RBP7.77□□□□□ -1.17
TRAF3-209ENST00000560463 ADPRHL1Q8NDY3 354 aa7.77□□□□□ -1.17
TRAF3-209ENST00000560463 OR5J2Q8NH18 312 aa7.77□□□□□ -1.17
TRAF3-209ENST00000560463 CNIH3Q8TBE1 160 aa7.77□□□□□ -1.17
TRAF3-209ENST00000560463 TMEM163Q8TC26 289 aa7.77□□□□□ -1.17
TRAF3-209ENST00000560463 APH1BQ8WW43 257 aa7.77□□□□□ -1.17
TRAF3-209ENST00000560463 IPCEF1Q8WWN9 437 aaPredicted RBP7.77□□□□□ -1.17
TRAF3-209ENST00000560463 PTDSS2Q9BVG9 487 aa7.77□□□□□ -1.17
TRAF3-209ENST00000560463 TAPBPLQ9BX59 468 aa7.77□□□□□ -1.17
TRAF3-209ENST00000560463 MRPS26Q9BYN8 205 aaKnown RBP7.77□□□□□ -1.17
TRAF3-209ENST00000560463 OR2B2Q9GZK3 357 aa7.77□□□□□ -1.17
TRAF3-209ENST00000560463 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.77□□□□□ -1.174e-6■□□□□ 10.4
TRAF3-209ENST00000560463 MCCC2Q9HCC0 563 aa7.77□□□□□ -1.17
TRAF3-209ENST00000560463 CCNB1IP1Q9NPC3 277 aa7.77□□□□□ -1.17
TRAF3-209ENST00000560463 NRIP3Q9NQ35 241 aa7.77□□□□□ -1.17
TRAF3-209ENST00000560463 CMC2Q9NRP2 79 aa7.77□□□□□ -1.17
TRAF3-209ENST00000560463 MRPL39Q9NYK5 338 aaKnown RBP7.77□□□□□ -1.17
TRAF3-209ENST00000560463 TVP23BQ9NYZ1 205 aa7.77□□□□□ -1.17
TRAF3-209ENST00000560463 PLA2G3Q9NZ20 509 aa7.77□□□□□ -1.17
TRAF3-209ENST00000560463 KLHL21Q9UJP4 597 aa7.77□□□□□ -1.17
TRAF3-209ENST00000560463 TRAPPC4Q9Y296 219 aa7.77□□□□□ -1.17
TRAF3-209ENST00000560463 FREM1Q5H8C1 2179 aa7.77□□□□□ -1.17
TRAF3-209ENST00000560463 LAMA5O15230 3695 aa7.76□□□□□ -1.17
TRAF3-209ENST00000560463 CFAP47Q6ZTR5 3102 aa7.76□□□□□ -1.17
TRAF3-209ENST00000560463 A0A087WXM4 84 aa7.76□□□□□ -1.17
TRAF3-209ENST00000560463 TRAV17A0A0B4J275 112 aa7.76□□□□□ -1.17
TRAF3-209ENST00000560463 A0A0G2JMM0 328 aa7.76□□□□□ -1.17
TRAF3-209ENST00000560463 A0A1W2PPB8 328 aa7.76□□□□□ -1.17
TRAF3-209ENST00000560463 A0A1W2PRS3 328 aa7.76□□□□□ -1.17
TRAF3-209ENST00000560463 OR2M5A3KFT3 312 aa7.76□□□□□ -1.17
TRAF3-209ENST00000560463 LIPT2A6NK58 231 aa7.76□□□□□ -1.17
TRAF3-209ENST00000560463 KIR3DP1A8MWS1 328 aa7.76□□□□□ -1.17
TRAF3-209ENST00000560463 LRRN3E7EW58 273 aa7.76□□□□□ -1.17
TRAF3-209ENST00000560463 BLOC1S5-TXNDC5H3BN57 136 aa7.76□□□□□ -1.17
TRAF3-209ENST00000560463 ACOT7O00154 380 aa7.76□□□□□ -1.17
TRAF3-209ENST00000560463 SEC14L5O43304 696 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms